Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0599000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:24451634:24455574:1 gene:Os07g0599000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0599000-01)
Sequence	ATGGCTGCCGCGGCGGCCACCTCCCGCCTCCTCCGCCGCCACCCGCCTCCCCTCCCCCTC CTCCTCCGCTCCTCCATCTCCTCCTCCCGCCCTCTCCTCCAGCAGCCCGAGCTCTCCCCC GCCGCCGCGGCCGATGCGGCCCCCGCCACCGATGCCGCGCCGCTCCCGCCGAAGCCGAGC ACGGGGAGCCCCTTCTACGGCGAGAACTGGCGGAACCCCGCCGCGGCGGCCAACCCGTCC TCATCCTCCCTCCTCCCCGCGGTCGTCGGCGGCGGCGCGCACGCCCGCGCGGCGGCGTAC TCGGCGTCCCCGGGCGCGGCGGAGCTGAAGGAGACGTTCGCGGAGTGGATGGCGGAGCAG CGGTGGGAGGAGATGAAGCAGCTGTTCGAGTTCTGGGTGAGGTCGCTCGACCCGGCGTCC GGGAAGCCCAACCGCCCCGACGTCGACCTCTTCAACCACTACCTCCGCGCGCAGCTCATG TCCGGGGCGCTCCCGATCGAGATGCTGGATCTCGCCGAGCAGATGCGCGAGTTCGAGATC ACGCCCAACACGGCCTCCCACAACCTCATCCTCAAGAGCATGGTCCAGGCCCAGGAGGCT GATGGCGCCGAGAAGCTCATTGAGCGGATGTTGCAAACAGGAACTCAACCAGATGACGAA TCCTACAATTTGGTTGTAAATCTTCTGATTAAACTGAACCGGGTGGACTCTACTTTGAAA TATTTGGATTTGATGCTTAAATCAGGCTACACAATATCTTCCTCTGTTTTTGTTGAGTAT GTCCGGGCATGTGTAAGATCTGGTAGATTGGATACATTGGCATCAGTCATAGAGAAGTGC AAGGCTACAGATCAGAACAAAGTCTTGTGTCCACCATGGTCCTGGTGTGTTGAAATAGCA GAAGCTGCTTTTGAAGCTAACAACAGCAAGCTGGGTCTTTTTGCTTTGGAATATCTTGCA AGATGGATTGCTCGTTCTGAGCGTGTTATTCCTCCTCTTCATCTTTCAGTTGATGAAGGT TTAGTACTCTCAGCTCTAAGTGCTGCTGCCAGAACTTGTAGCACTGATCTCCTGAATGCT GCTTGGTCAATATTACGTAAGTCCTTGCACCAGAAAAGGGCACCGACGCCAGAGGCATAT CTTGCCAAGATTTATGCTCATTCATCCATTGGTCATCTTCAGCGGGCTTTTGGTACCCTA CGTGAATTTGAAAATACCTATGGGAACTTTGAGGATATTGATTCAGAGCTCTTCTCACCG TTCACTTCATTGCGACCACTCGTTGTTGCTTGCTGTAAGGATGGGTACACCACACTGGAC TCGGTCTATGTGCAATTGGAGAATTTAAGTTCTGCAGATTCGCCATACAAATCTGTTGCT GCTCTTAACTGTGTTATATTGGGGTGTGCAAACATTTGGGATCTTGAGCGAGCATATGAA ACTTTTGAGGCAATAAAAGAAAAGTTTGGACTTACACCTGACATACATTCTTACAATGCG CTTTTGCATGCATTTGGAAAGCGGAAAAAGACTGAAGAAGCTTGCAACGTCTTTCAGCAT CTAGTAAGCCTTGGTGTTAAGCCAAATGCAACAACTTATGGCCTTCTTGTTGACACTCAT CTTGTAAATCGGGACGCAAAAGCTGCTCTTGCTGTAATTGCTGAGATGGTTGATGCGGGC TTTACTCCTTCAAAGGAGACACTTAAGAAGGTCCGAAGACGCTGCTCCCGTGAATCAGAT TTTGATAGTGACGAGAAAGTGCAATCCCTGGCTAAGCAGTTTAACTACCGAATGGGTGGT GAAAACCGCAGGGAGATGCTCTTTAACATTGAATACAGCGCTGAGTTCACAAGTACTCCT AGTCCAAGTTGA

Peptide Sequence

PEP ID	Os07t0599000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:24451634:24455574:1 gene:Os07g0599000 transcript:Os07t0599000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0599000-01)
Sequence	MAAAAATSRLLRRHPPPLPLLLRSSISSSRPLLQQPELSPAAAADAAPATDAAPLPPKPS TGSPFYGENWRNPAAAANPSSSSLLPAVVGGGAHARAAAYSASPGAAELKETFAEWMAEQ RWEEMKQLFEFWVRSLDPASGKPNRPDVDLFNHYLRAQLMSGALPIEMLDLAEQMREFEI TPNTASHNLILKSMVQAQEADGAEKLIERMLQTGTQPDDESYNLVVNLLIKLNRVDSTLK YLDLMLKSGYTISSSVFVEYVRACVRSGRLDTLASVIEKCKATDQNKVLCPPWSWCVEIA EAAFEANNSKLGLFALEYLARWIARSERVIPPLHLSVDEGLVLSALSAAARTCSTDLLNA AWSILRKSLHQKRAPTPEAYLAKIYAHSSIGHLQRAFGTLREFENTYGNFEDIDSELFSP FTSLRPLVVACCKDGYTTLDSVYVQLENLSSADSPYKSVAALNCVILGCANIWDLERAYE TFEAIKEKFGLTPDIHSYNALLHAFGKRKKTEEACNVFQHLVSLGVKPNATTYGLLVDTH LVNRDAKAALAVIAEMVDAGFTPSKETLKKVRRRCSRESDFDSDEKVQSLAKQFNYRMGG ENRREMLFNIEYSAEFTSTPSPS

Transcript Sequence

Transcript ID	Os07t0599000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24451634:24455574:1 gene:Os07g0599000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0599000-01)
Sequence	GCCGCCTTCTTCCCCTCTCACTCCCACCTCACTAAAACCCTAGCCCAAACCCCACCTCCT CTCCCGCCATGGCTGCCGCGGCGGCCACCTCCCGCCTCCTCCGCCGCCACCCGCCTCCCC TCCCCCTCCTCCTCCGCTCCTCCATCTCCTCCTCCCGCCCTCTCCTCCAGCAGCCCGAGC TCTCCCCCGCCGCCGCGGCCGATGCGGCCCCCGCCACCGATGCCGCGCCGCTCCCGCCGA AGCCGAGCACGGGGAGCCCCTTCTACGGCGAGAACTGGCGGAACCCCGCCGCGGCGGCCA ACCCGTCCTCATCCTCCCTCCTCCCCGCGGTCGTCGGCGGCGGCGCGCACGCCCGCGCGG CGGCGTACTCGGCGTCCCCGGGCGCGGCGGAGCTGAAGGAGACGTTCGCGGAGTGGATGG CGGAGCAGCGGTGGGAGGAGATGAAGCAGCTGTTCGAGTTCTGGGTGAGGTCGCTCGACC CGGCGTCCGGGAAGCCCAACCGCCCCGACGTCGACCTCTTCAACCACTACCTCCGCGCGC AGCTCATGTCCGGGGCGCTCCCGATCGAGATGCTGGATCTCGCCGAGCAGATGCGCGAGT TCGAGATCACGCCCAACACGGCCTCCCACAACCTCATCCTCAAGAGCATGGTCCAGGCCC AGGAGGCTGATGGCGCCGAGAAGCTCATTGAGCGGATGTTGCAAACAGGAACTCAACCAG ATGACGAATCCTACAATTTGGTTGTAAATCTTCTGATTAAACTGAACCGGGTGGACTCTA CTTTGAAATATTTGGATTTGATGCTTAAATCAGGCTACACAATATCTTCCTCTGTTTTTG TTGAGTATGTCCGGGCATGTGTAAGATCTGGTAGATTGGATACATTGGCATCAGTCATAG AGAAGTGCAAGGCTACAGATCAGAACAAAGTCTTGTGTCCACCATGGTCCTGGTGTGTTG AAATAGCAGAAGCTGCTTTTGAAGCTAACAACAGCAAGCTGGGTCTTTTTGCTTTGGAAT ATCTTGCAAGATGGATTGCTCGTTCTGAGCGTGTTATTCCTCCTCTTCATCTTTCAGTTG ATGAAGGTTTAGTACTCTCAGCTCTAAGTGCTGCTGCCAGAACTTGTAGCACTGATCTCC TGAATGCTGCTTGGTCAATATTACGTAAGTCCTTGCACCAGAAAAGGGCACCGACGCCAG AGGCATATCTTGCCAAGATTTATGCTCATTCATCCATTGGTCATCTTCAGCGGGCTTTTG GTACCCTACGTGAATTTGAAAATACCTATGGGAACTTTGAGGATATTGATTCAGAGCTCT TCTCACCGTTCACTTCATTGCGACCACTCGTTGTTGCTTGCTGTAAGGATGGGTACACCA CACTGGACTCGGTCTATGTGCAATTGGAGAATTTAAGTTCTGCAGATTCGCCATACAAAT CTGTTGCTGCTCTTAACTGTGTTATATTGGGGTGTGCAAACATTTGGGATCTTGAGCGAG CATATGAAACTTTTGAGGCAATAAAAGAAAAGTTTGGACTTACACCTGACATACATTCTT ACAATGCGCTTTTGCATGCATTTGGAAAGCGGAAAAAGACTGAAGAAGCTTGCAACGTCT TTCAGCATCTAGTAAGCCTTGGTGTTAAGCCAAATGCAACAACTTATGGCCTTCTTGTTG ACACTCATCTTGTAAATCGGGACGCAAAAGCTGCTCTTGCTGTAATTGCTGAGATGGTTG ATGCGGGCTTTACTCCTTCAAAGGAGACACTTAAGAAGGTCCGAAGACGCTGCTCCCGTG AATCAGATTTTGATAGTGACGAGAAAGTGCAATCCCTGGCTAAGCAGTTTAACTACCGAA TGGGTGGTGAAAACCGCAGGGAGATGCTCTTTAACATTGAATACAGCGCTGAGTTCACAA GTACTCCTAGTCCAAGTTGATTTTGATGATGCCGGTGCGCTCTAGTAGACGTAACGTGTA CCCTCGCTCACTTTGCTGGTACCTGAAGGGCACGGAAGCTGTAGTCTGTAAATTATACTT CTTTGTACCAACTTCCCTAATTATTTCAAGCATCTCAAGCTATCATTTTTGTTGGCAGAA CCCTCAACAGGATTTATGTTAGGATTTCAGAATAAGGGTCCTAATAGATTTTTTTTTTTG CCTGCTCAAAGCACCATGTTTTACAATCAATGGATGTTTGCTCAACTTATCTCTCAGTTC CAGCCTTTTTTACGGCTCTCGTGTTATTTATTCCTATACTGCATGCCATGTCAATTATGT