Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0598900-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:24446289:24451289:1 gene:Os07g0598900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T1K7.11 protein. (Os07t0598900-01);Hypothetical conserved gene. (Os07t0598900-02)
Sequence	ATGGAGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTAC AGTCCTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGC TACCTCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAG AGAATTGCAGTGATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATC AATGAGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTT TGTTGCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAG AGAATGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCT ATTCTTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTT ATTGATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCT GAAGCATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTA GAAGGCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTG GTGCAGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGT GCCAAGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAAT CTCCGTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTG TCTAAGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATT TATCGTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGCA GTGAGGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACA AACAAGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGT CGTTGCAAGCACTGA

Peptide Sequence

PEP ID	Os07t0598900-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:24446289:24451289:1 gene:Os07g0598900 transcript:Os07t0598900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T1K7.11 protein. (Os07t0598900-01);Hypothetical conserved gene. (Os07t0598900-02)
Sequence	MEDDDECPPLAVELSPEKPYSPPPLGPSAASPVGVTVITGYLGAGKSTLVNYILSAQHGK RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKE RMDHILLETTGLADPAPLVSILWLDDQLESSIKLDSIITVIDAKNFRLQIDEHNKSSSFP EAFHQIAFADVVILNKIDLVEGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYG AKNSSQLQELLEYSKSVPPNLRHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDI YRCKGILHVHNSDQVHTLQAVREVYEVLPAREWSKTESRTNKIVVIGRNLDINILQDSFS RCKH

Transcript Sequence

Transcript ID	Os07t0598900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24446289:24451289:1 gene:Os07g0598900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T1K7.11 protein. (Os07t0598900-01);Hypothetical conserved gene. (Os07t0598900-02)
Sequence	AGTTCTCGAGGCTTCTGTTTCCTCGTCTCTCGTCGTCGTCGGCGGCGGCGGCGGCCATGG AGGACGACGACGAGTGCCCTCCCCTCGCCGTCGAGCTCTCGCCGGAGAAGCCGTACAGTC CTCCGCCGCTCGGTCCCTCCGCGGCGTCGCCGGTCGGAGTCACCGTCATCACTGGCTACC TCGGCGCCGGCAAGTCCACGTTAGTCAACTACATTCTAAGTGCGCAACATGGAAAGAGAA TTGCAGTGATATTGAATGAGTTTGGAGAGGAAATTGGGGTTGAAAGAGCAATGATCAATG AGGGGCAAGGTGGCGCGCTTGTTGAAGAGTGGGTAGAGCTGGCAAATGGATGTGTTTGTT GCACGGTGAAACACAGCCTGGTTCAAGCACTTGAGCAGCTTGTGCAGAGAAAGGAGAGAA TGGATCACATATTACTAGAGACAACAGGATTGGCTGATCCTGCACCTCTTGTCTCTATTC TTTGGCTAGACGACCAGTTGGAGTCATCAATTAAACTAGACTCTATCATTACGGTTATTG ATGCAAAAAACTTCAGGCTGCAAATTGATGAGCACAATAAGTCATCATCATTCCCTGAAG CATTTCATCAAATTGCATTTGCGGATGTTGTGATATTGAACAAAATTGACCTAGTAGAAG GCAGTCTTGAGGATTTGGAAAGGCAGATTCATGAAGTCAACGCTCTTGTTACAGTGGTGC AGTCTGTCCGCTGCCAGGTTGACTTAAATAAAATATTTGATCAGCAAGCATATGGTGCCA AGAATTCATCGCAGCTGCAAGAACTTCTGGAGTACAGTAAATCAGTACCACCTAATCTCC GTCATGATAACAGTATTTCTACCTTGTGTATTTGTGAGCAGGATCCAATTTCCCTGTCTA AGGTGGAATCATGGCTCGAGGATCTTCTTTGGGAAAGGAAGTTGGACATGGATATTTATC GTTGTAAAGGGATTTTACATGTCCATAACTCGGATCAAGTTCATACATTACAGGCAGTGA GGGAAGTTTATGAAGTTCTGCCAGCTCGAGAATGGTCCAAGACAGAATCTCGCACAAACA AGATAGTTGTCATAGGTCGCAACTTGGATATCAATATCCTTCAAGATTCATTTAGTCGTT GCAAGCACTGATATCGAAGGGTTTGTTCATCCTGTACCCTGCACCTCCATGCAATCAAAT ACTGCAAGGAGTTTCTATGGCTCCCCGAAGTAATGTGCTTTATGTTTGTCTGTATATCTT CAAAGGTGACAGTGCTGACAGCTTCTTGGCAATGAAGTTCTGCACAACGGATGCGATTAT CCGACGCGCCATGTTCAACTTTGGAAGAGGAACATGCATCCAGTTACAAGATGATGAACT ACTTGTAGAAGATTTTAGTTAAGAGTAGTATGCAAACTGATGATCGGCAACATTTCTCGT TGTATGGAACTGACCGAAAGCAATCTTTTTGTAAGAAACCGATTGGCAACAATAACATAC TGGGAGTTGAAATCTGATCCTCAAATTCATGTTTGT