Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0598500-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:24419887:24422315:-1 gene:Os07g0598500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0598500-01)
Sequence	ATGGCCGCCTCCTCTTCCTTCCTCGCCGCCGGCCGCCGCCTGATCCGCCTCGGCTGCGGC AGGCTCCTCCCCGCCGGCCACGCGCGATCCCATGGCTCCACCCCTGCCCTCATTCGAGCC GCCGCCGCCGCCTCCTCCCCCGCCTCTCCTCGCGGCCACAGCGGGGGGAGGAAGCCGGCG CGGCCCCCGAGCCTGCAGTCCACGCTGTGGCCGCTGGGCCACCCGGGCACGCTCCTGGTG CCGGAGATCGAGCGGTGGGCGGCCAAGCCAGGCAACCGCCTCCGCCACGTCGAGCTCGAG CGCATCGTCAAGGAGCTCCGCAAGCGACGCCGCCACCGCCAGGCCCTCGAGGTCTCTGAA TGGATGAATGCCAAGGGACATGTAAAATTTCTGCCAAAGGATCACGCTGTTCACCTGGAT TTGATTGGTGAAATTCATGGAAGCAGTGCAGCCGAGACTTACTTCAACAACCTGCCAGAT AAAGATAAGACAGAAAAACCCTATGGTGCACTTCTTAACTGCTACACACGGGAACTCCTG GTTGAAAAATCGTTGGCTCATTTTCAGAAGATGAAAGAGTTGGGTTTTGTGTTTTCCACA CTCCCCTACAACAACATCATGGGTCTGTATACGAACCTAGGGCAGCATGAAAAGGTTCCT TCAGTAATTGCAGAGATGAAAAGCAATGGTATCGTTCCTGACAATTTCAGCTACAGAATA TGCATTAACTCTTATGGCACAAGGGCTGATTTTTTCGGGATGGAAAACACCCTTGAAGAG ATGGAGTGTGAACCTAAAATCGTTGTTGATTGGAACACGTATGCTGTCGTGGCAAGCAAC TACATTAAGGGCAACATAAGGGAGAAAGCATTCTCTGCCTTAAAGAAAGCAGAAGCAAAA ATAAATATAAAAGATTCAGATTCCTATAACCACCTGATTTCCTTGTATGGACATCTGGGG GACAAATCAGAGGTCAATAGGCTGTGGGCGCTCCAAATGTCGAACTGCAATAGGCATATT AATAAGGATTACACTACAATGCTTGCAGTGCTCGTGAAACTTAATGAGATTGAAGAAGCT GAAGTGTTGCTGAAAGAGTGGGAGTCGAGCGGAAATGCATTTGACTTCCAAGTTCCAAAT GTCCTGCTCACTGGATACCGCCAGAAGGACTTGCTGGACAAGGCTGAGGCACTTCTGGAT GATTTCTTGAAGAAGGGAAAGATGCCTCCTTCAACCAGCTGGGCAATTGTGGCAGCTGGC TATGCGGAGAAAGGTGATGCTGCGAAAGCATATGAGCTGACAAAGAATGCCCTATGTGTA TATGCTCCAAATACTGGTTGGATCCCTAGGCCTGGGATGATTGAGATGATACTTAAGTAT CTTGGAGATGAAGGTGATGTCGAGGAGGTTGAAATTTTCGTTGATCTGCTGAAAGTTGCT GTGCCACTGAACTCAGATATGACTGACGCTTTGTCAAGGGCTCGAATGAGAGAAGAAAAG AAGGTTAAAGATGCAGTGTAA

Peptide Sequence

PEP ID	Os07t0598500-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:24419887:24422315:-1 gene:Os07g0598500 transcript:Os07t0598500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0598500-01)
Sequence	MAASSSFLAAGRRLIRLGCGRLLPAGHARSHGSTPALIRAAAAASSPASPRGHSGGRKPA RPPSLQSTLWPLGHPGTLLVPEIERWAAKPGNRLRHVELERIVKELRKRRRHRQALEVSE WMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALLNCYTRELL VEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRI CINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAK INIKDSDSYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLVKLNEIEEA EVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAG YAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVEIFVDLLKVA VPLNSDMTDALSRARMREEKKVKDAV

Transcript Sequence

Transcript ID	Os07t0598500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24419887:24422315:-1 gene:Os07g0598500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0598500-01)
Sequence	GTTAACCCCCATGGCCGCCTCCTCTTCCTTCCTCGCCGCCGGCCGCCGCCTGATCCGCCT CGGCTGCGGCAGGCTCCTCCCCGCCGGCCACGCGCGATCCCATGGCTCCACCCCTGCCCT CATTCGAGCCGCCGCCGCCGCCTCCTCCCCCGCCTCTCCTCGCGGCCACAGCGGGGGGAG GAAGCCGGCGCGGCCCCCGAGCCTGCAGTCCACGCTGTGGCCGCTGGGCCACCCGGGCAC GCTCCTGGTGCCGGAGATCGAGCGGTGGGCGGCCAAGCCAGGCAACCGCCTCCGCCACGT CGAGCTCGAGCGCATCGTCAAGGAGCTCCGCAAGCGACGCCGCCACCGCCAGGCCCTCGA GGTCTCTGAATGGATGAATGCCAAGGGACATGTAAAATTTCTGCCAAAGGATCACGCTGT TCACCTGGATTTGATTGGTGAAATTCATGGAAGCAGTGCAGCCGAGACTTACTTCAACAA CCTGCCAGATAAAGATAAGACAGAAAAACCCTATGGTGCACTTCTTAACTGCTACACACG GGAACTCCTGGTTGAAAAATCGTTGGCTCATTTTCAGAAGATGAAAGAGTTGGGTTTTGT GTTTTCCACACTCCCCTACAACAACATCATGGGTCTGTATACGAACCTAGGGCAGCATGA AAAGGTTCCTTCAGTAATTGCAGAGATGAAAAGCAATGGTATCGTTCCTGACAATTTCAG CTACAGAATATGCATTAACTCTTATGGCACAAGGGCTGATTTTTTCGGGATGGAAAACAC CCTTGAAGAGATGGAGTGTGAACCTAAAATCGTTGTTGATTGGAACACGTATGCTGTCGT GGCAAGCAACTACATTAAGGGCAACATAAGGGAGAAAGCATTCTCTGCCTTAAAGAAAGC AGAAGCAAAAATAAATATAAAAGATTCAGATTCCTATAACCACCTGATTTCCTTGTATGG ACATCTGGGGGACAAATCAGAGGTCAATAGGCTGTGGGCGCTCCAAATGTCGAACTGCAA TAGGCATATTAATAAGGATTACACTACAATGCTTGCAGTGCTCGTGAAACTTAATGAGAT TGAAGAAGCTGAAGTGTTGCTGAAAGAGTGGGAGTCGAGCGGAAATGCATTTGACTTCCA AGTTCCAAATGTCCTGCTCACTGGATACCGCCAGAAGGACTTGCTGGACAAGGCTGAGGC ACTTCTGGATGATTTCTTGAAGAAGGGAAAGATGCCTCCTTCAACCAGCTGGGCAATTGT GGCAGCTGGCTATGCGGAGAAAGGTGATGCTGCGAAAGCATATGAGCTGACAAAGAATGC CCTATGTGTATATGCTCCAAATACTGGTTGGATCCCTAGGCCTGGGATGATTGAGATGAT ACTTAAGTATCTTGGAGATGAAGGTGATGTCGAGGAGGTTGAAATTTTCGTTGATCTGCT GAAAGTTGCTGTGCCACTGAACTCAGATATGACTGACGCTTTGTCAAGGGCTCGAATGAG AGAAGAAAAGAAGGTTAAAGATGCAGTGTAAGCACTATGATGAAGAAGATAATGTTTCAC GAGCTCTCAAGGCTGCTCTTTGGTCTGCACTGACACTTTGTTCTTGCTGCATTTCTTCTT CTCGTTTTTTTTTCTTTTTTAGGAGAATGTGGGTGGGGGATGGTAACCAAAATGAGATAT TATCTGACATACAGTAGTTCTGGTAACATTGTCTGTACCTGAGTACCTGAGTGAACTTGT TATCACTCGATTGGTCACTTTAAGTATGTTGCTGGGATTCTCAGCAATAGTTATATTGCT TGAGTT