Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0596600-03
CDS Infomation	cds chromosome:IRGSP-1.0:7:24292999:24297251:-1 gene:Os07g0596600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDK-LIKE 2, cyclin-dependent kinase-like 2 description:Similar to IBS1 (IMPAIRED IN BABA-INDUCED STERILITY 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase. (Os07t0596600-01);Similar to Cdc2MsC protein. (Os07t0596600-02);Similar to predicted protein. (Os07t0596600-03)
Sequence	GTATTTAGGGCACGGGAACTTGATACTGGAAAGATTGTCGCCTTGAAGAAGGTGCGGTTT GACAATTTTGAGCCAGAAAGTGTTAGATTCATGGCAAGGGAGATACAAATATTGAGAAGG CTCGATCATCCAAATGTTATGAAGCTAGAAGGTTTGATTACTTCTCGGCTATCATGCAGT CTCTATCTAGTATTTGAATACATGGAGCATGATCTTGCTGGACTTTCTTCCTCCCCTGAC ATCAAGTTTAGTGAAGCACAGGTCAAGTGCTACATGAACCAGTTACTGTCAGGACTGGAG CATTGCCATTCACGTCGTATTGTACATCGCGACATCAAGGGTGCCAATCTCCTTGTGAAT AATGAAGGGGTTCTAAAAATAGCTGATTTTGGCCTTGCTAATTACTTTGACCCCAACAAA AACCATCCGCTGACCAGCCGTGTCGTTACTCTGTGGTATCGACCACCTGAACTGCTACTA GGTTCAACTCACTATGATGCAGCTGTTGATTTGTGGAGTGCTGGGTGTGTATTTGCTGAA ATGTTCCGTGGGAAACCTATCCTGCAGGGAAGAACTGAGGTGGAGCAACTGCATAAGATT TTTAAGCTATGTGGTTCCCCTGCTGATGAGTACTGGAAGAAGTCAAAGTTGCCTCATGCG ACAATATTCAAACCACATTGTCCTTATCAAAGTACCCTTCAAGATGTTTTTAAAGAAATG CCAGCAAATGCATTGAGATTACTAGAAACTCTTCTATCAGTGGAGCCCTACAAACGTGGT ACTGCATCTGCTGCTCTTACATCTGAGTTTTTCAAGACAAAGCCTTACGCATGTGATCCC TCAAGCCTGCCGAAGTATGCACCCAACAAGGAGATGGATGCAAAATTACGAGAAGATTCA CACAGACGAAAGGCTAGCAGAGGTCATGGGCCAGAAGCATCAAGGAAATCAAGGCTCAGC AGAGCTGCAAGAGAAACAACTACAGTTAATAAGCAAACTGATGGCAAAGAGGAGTCCAAA ACTAAAGCAAATGGAACCAAGGACAACTCAATATTGGATCGTACAAAGGTAAATGGTGAT GCTAGGTTATTTTCAGACATACAGCCAGTTTCAGTGGCCCAAGTCAAAGAAAGGTCTCGC CATGTTAAGAATGATTCACGAGAAGAGATCCCTTTCTCTGGACCATTGATTGTTTCATCA TCTAGTGGCTTTGCTTGGGCTAAAAAACCACCAGAAGATCGTTCATTCGCTAGATCTCGG ACCAAATCTAGTTCAAGGGGCCAATTTACTGCTGAGTTAGATCAGGACAATAAGATGCCA GCTAAAGAGAACCAGAACCTCGGCTTGAAGGAACAACCTAACAGAGACATGCATATAGCA CGTGCCAACTCCAAAGTTCGAGAGCCTCATGATGCAGCAAAGCGTGCCGTTCTGAAGAAA TGGTCACAGTTAGGACGTCCAGATTCCTTTGATTCTTACGACACTTACCACTCTCAGAAT TTTTCTAATGCAATGTATCTTGGGGATACCCTCTCGTCAAAAAACAGCATCAAGGGTGAT CATGATCAAGGAGAGAGGGTTGAATATTCTGGCCCTTTGTTATCTCAGTCACACAAGGTT GATGAACTATTAGAGAAACATGAGCGCCACATCCGGCAAGTAGTTCGGAAATCATGGTTC AGTAGAGGAAAAAAATAA

Peptide Sequence

PEP ID	Os07t0596600-03
PEP Infomation	pep chromosome:IRGSP-1.0:7:24292999:24297251:-1 gene:Os07g0596600 transcript:Os07t0596600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDK-LIKE 2, cyclin-dependent kinase-like 2 description:Similar to IBS1 (IMPAIRED IN BABA-INDUCED STERILITY 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase. (Os07t0596600-01);Similar to Cdc2MsC protein. (Os07t0596600-02);Similar to predicted protein. (Os07t0596600-03)
Sequence	VFRARELDTGKIVALKKVRFDNFEPESVRFMAREIQILRRLDHPNVMKLEGLITSRLSCS LYLVFEYMEHDLAGLSSSPDIKFSEAQVKCYMNQLLSGLEHCHSRRIVHRDIKGANLLVN NEGVLKIADFGLANYFDPNKNHPLTSRVVTLWYRPPELLLGSTHYDAAVDLWSAGCVFAE MFRGKPILQGRTEVEQLHKIFKLCGSPADEYWKKSKLPHATIFKPHCPYQSTLQDVFKEM PANALRLLETLLSVEPYKRGTASAALTSEFFKTKPYACDPSSLPKYAPNKEMDAKLREDS HRRKASRGHGPEASRKSRLSRAARETTTVNKQTDGKEESKTKANGTKDNSILDRTKVNGD ARLFSDIQPVSVAQVKERSRHVKNDSREEIPFSGPLIVSSSSGFAWAKKPPEDRSFARSR TKSSSRGQFTAELDQDNKMPAKENQNLGLKEQPNRDMHIARANSKVREPHDAAKRAVLKK WSQLGRPDSFDSYDTYHSQNFSNAMYLGDTLSSKNSIKGDHDQGERVEYSGPLLSQSHKV DELLEKHERHIRQVVRKSWFSRGKK

Transcript Sequence

Transcript ID	Os07t0596600-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24292999:24297251:-1 gene:Os07g0596600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDK-LIKE 2, cyclin-dependent kinase-like 2 description:Similar to IBS1 (IMPAIRED IN BABA-INDUCED STERILITY 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase. (Os07t0596600-01);Similar to Cdc2MsC protein. (Os07t0596600-02);Similar to predicted protein. (Os07t0596600-03)
Sequence	GTATTTAGGGCACGGGAACTTGATACTGGAAAGATTGTCGCCTTGAAGAAGGTGCGGTTT GACAATTTTGAGCCAGAAAGTGTTAGATTCATGGCAAGGGAGATACAAATATTGAGAAGG CTCGATCATCCAAATGTTATGAAGCTAGAAGGTTTGATTACTTCTCGGCTATCATGCAGT CTCTATCTAGTATTTGAATACATGGAGCATGATCTTGCTGGACTTTCTTCCTCCCCTGAC ATCAAGTTTAGTGAAGCACAGGTCAAGTGCTACATGAACCAGTTACTGTCAGGACTGGAG CATTGCCATTCACGTCGTATTGTACATCGCGACATCAAGGGTGCCAATCTCCTTGTGAAT AATGAAGGGGTTCTAAAAATAGCTGATTTTGGCCTTGCTAATTACTTTGACCCCAACAAA AACCATCCGCTGACCAGCCGTGTCGTTACTCTGTGGTATCGACCACCTGAACTGCTACTA GGTTCAACTCACTATGATGCAGCTGTTGATTTGTGGAGTGCTGGGTGTGTATTTGCTGAA ATGTTCCGTGGGAAACCTATCCTGCAGGGAAGAACTGAGGTGGAGCAACTGCATAAGATT TTTAAGCTATGTGGTTCCCCTGCTGATGAGTACTGGAAGAAGTCAAAGTTGCCTCATGCG ACAATATTCAAACCACATTGTCCTTATCAAAGTACCCTTCAAGATGTTTTTAAAGAAATG CCAGCAAATGCATTGAGATTACTAGAAACTCTTCTATCAGTGGAGCCCTACAAACGTGGT ACTGCATCTGCTGCTCTTACATCTGAGTTTTTCAAGACAAAGCCTTACGCATGTGATCCC TCAAGCCTGCCGAAGTATGCACCCAACAAGGAGATGGATGCAAAATTACGAGAAGATTCA CACAGACGAAAGGCTAGCAGAGGTCATGGGCCAGAAGCATCAAGGAAATCAAGGCTCAGC AGAGCTGCAAGAGAAACAACTACAGTTAATAAGCAAACTGATGGCAAAGAGGAGTCCAAA ACTAAAGCAAATGGAACCAAGGACAACTCAATATTGGATCGTACAAAGGTAAATGGTGAT GCTAGGTTATTTTCAGACATACAGCCAGTTTCAGTGGCCCAAGTCAAAGAAAGGTCTCGC CATGTTAAGAATGATTCACGAGAAGAGATCCCTTTCTCTGGACCATTGATTGTTTCATCA TCTAGTGGCTTTGCTTGGGCTAAAAAACCACCAGAAGATCGTTCATTCGCTAGATCTCGG ACCAAATCTAGTTCAAGGGGCCAATTTACTGCTGAGTTAGATCAGGACAATAAGATGCCA GCTAAAGAGAACCAGAACCTCGGCTTGAAGGAACAACCTAACAGAGACATGCATATAGCA CGTGCCAACTCCAAAGTTCGAGAGCCTCATGATGCAGCAAAGCGTGCCGTTCTGAAGAAA TGGTCACAGTTAGGACGTCCAGATTCCTTTGATTCTTACGACACTTACCACTCTCAGAAT TTTTCTAATGCAATGTATCTTGGGGATACCCTCTCGTCAAAAAACAGCATCAAGGGTGAT CATGATCAAGGAGAGAGGGTTGAATATTCTGGCCCTTTGTTATCTCAGTCACACAAGGTT GATGAACTATTAGAGAAACATGAGCGCCACATCCGGCAAGTAGTTCGGAAATCATGGTTC AGTAGAGGAAAAAAATAATACAAGTGAGGAAAAGACTGGCCATTTTTGCGTTGGAGAAGC GGCATCTAGGTATATAGCAGTGAAGGGGATATGTCAGTTTCTGGTGTCTTCTGTCAACCG GAAACTCGCCTTTGGTGGTAACATTGTTGATAAGATTAAGACCCAACTGAAAACATTATA TGATTCTCATATCATAGTAAAATCAAAACTGTGCCTCGCTGCTTCTACTAGATAATAACT TGTCGCTTGTTGTAGATTCCCCAAAGACTCCTGTGTCACACCATAGAATGGAATGGTGTT TTTTTTTTTCTCCTCTCCACCTTGTGCCTAGGAATAACAGCTGACGAGAGTGGTTAATTC GAGTGATC