Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0592300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:24137963:24142912:-1 gene:Os07g0592300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like family protein. (Os07t0592300-01)
Sequence	ATGGCCACAGAAGATACTTCTCACATTTCTGGTAGTTCTGAGTCAACAATTCCATTGCTA GAACAGCTTGCTGAAGTATTTGGCAAGCTGAAATCTCACACAGAAACATCCTTGCAATTG CAAAACGGCATCAATTGGGAAGATATCAAAGCACATTTCCTGAACCTTGAGAAGTCGTAC AAAAGTAAGTGCGATGAACTTGCAGAGAAGCAGAAGGCATTAGAAGAAAAGAAAGCTGAA TCCTGTAGGCTTATTGCAGAGAAGGAAGCTAATGTTTCTGCAAAAGAGCGTGCTTTCCTG AACCAGTTTCAGGAGCTAAGGGATACAGCTGTCTCTGCCCTTTCAGAGGTGCGACAAAAA TATAAGGTGGAGCTTGCTGGTATACTTGATGCCAATGGAAGCAAAGATAAAAAGGTAAGA ACCTCAACCAATGACATGAATGCGTTGTGTGCTTCAGAGGAGAATACAACTGCTAGTGGG CTGGGTGAACCATCTGAAGCTTCACCTGTTGATGTTAAGCCACGTCCTGTATTGAAGCAA CTATGTGAGCAGATGGATACAGCAGGCCTTCTGAAATTTCTTTCAGAAAATTGGAAAAAA CTTTCTAGCCTTCGTGATGAACTTTCTGCTGCACTAAGATGTGCTACTGACCCTGCACGC TTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCACCTGGGAAT AAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAAGCTATAACA CCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAAATTAGGGAG CTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGACCTCGATGCT TCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACATTTAATGTT GATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCTCGTCGCAAG CAGACTGCTGAGCTTTGTCGCTCCCTTTGTCTTAATGAGAGAATACCAGATATTATCAAG GAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCAATTTATACATGCCTTTGGGCTT TCTGAGAGCTTCCCTCCTGCACCTCTGCTGAAGACATATGTGGAGGAATTAAAAGATTCA CTTGGCAATAATGGGGATGGCAACGCGGCTTCTCTGAAGGATGACCCAAAGACTCGGGAA CTACTTGCATTGAGGGCTGTAATAAAATGCATTGAAGAGTATAAGCTTCAGAAGGACTAT CCTCTTGGACCTCTCCAGAAGCGTGTTGCTGAGCTAAAATCTAAGGGTGAGAAAAGGCCA TTGGAAGCTGGGCGCCATAATGCAAAGAAGCCTCGCACTTTCGGCAATTCAGCTGCTCGC AGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGACCTTCAGGCCCGGCTGGTACTTGG CAGCGGCCCCCTCCACCAATGCCTTCCTATCCTGATCGATATGGACATGCAGATCGGTAC CATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTACAGCGAACCA TACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCATCATACAAC TCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCAGGCGGCTAC GGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCGAGTAGCTATTCGGGTTATTCTGGT TACCACCCTTCACTACCAAGGTTATAA

Peptide Sequence

PEP ID	Os07t0592300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:24137963:24142912:-1 gene:Os07g0592300 transcript:Os07t0592300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like family protein. (Os07t0592300-01)
Sequence	MATEDTSHISGSSESTIPLLEQLAEVFGKLKSHTETSLQLQNGINWEDIKAHFLNLEKSY KSKCDELAEKQKALEEKKAESCRLIAEKEANVSAKERAFLNQFQELRDTAVSALSEVRQK YKVELAGILDANGSKDKKVRTSTNDMNALCASEENTTASGLGEPSEASPVDVKPRPVLKQ LCEQMDTAGLLKFLSENWKKLSSLRDELSAALRCATDPARFVLGSLEGFFPSDHTSSPGN KQIILQGQRRSCIILMEAITPALATKEPGDNHPWSSEIRELAKAIAEEWKSKLAEVDLDA SDGYSLEAQAFLQLLTTFNVDSVLDEDELCKLVVAVSRRKQTAELCRSLCLNERIPDIIK ELVNRHRQIDAVQFIHAFGLSESFPPAPLLKTYVEELKDSLGNNGDGNAASLKDDPKTRE LLALRAVIKCIEEYKLQKDYPLGPLQKRVAELKSKGEKRPLEAGRHNAKKPRTFGNSAAR RPPNPVGSAGRRPSGPAGTWQRPPPPMPSYPDRYGHADRYHYTAPSATYDPPAYASYSEP YSASKPYQYTPGSVAPASYNSNQFKVAYGGPGAPPTAGGYGSYNDAAGQSTSSSYSGYSG YHPSLPRL

Transcript Sequence

Transcript ID	Os07t0592300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24137963:24142912:-1 gene:Os07g0592300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like family protein. (Os07t0592300-01)
Sequence	ATGTTAGCCACAGAATGCATCCCCATCCCAAGCCTCTCAGGGCGCAGGCTCCGGCGAACC CAACCCTAGTCCGGTAGCCCCCGACGCCGCCCCACCGCGCCGACGCCGCGCATCCTCCCC GCGGCCCTCGGAGGCATCTCCTCGCCCGTCGTCCCTCGGCGCCTCGCCATCGCCGGCGGT CTGCCTCCGCTGCTCGGCGGCTCGCCCGACGCACCCACGAGTATCTTCCCCTTCCCTGGC GTAAAAGAAAATCTCCCGTCTCGTCTCCTCCGCTCTTTGCGCCGTCTCGCTGCTGAACAG GGGAGGGGCGGCGATCTCCATCTGCCGAGCAGAGCAGGAGAGGGGATCCTGGTCATCATT TGTTGAAAAATGGCCACAGAAGATACTTCTCACATTTCTGGTAGTTCTGAGTCAACAATT CCATTGCTAGAACAGCTTGCTGAAGTATTTGGCAAGCTGAAATCTCACACAGAAACATCC TTGCAATTGCAAAACGGCATCAATTGGGAAGATATCAAAGCACATTTCCTGAACCTTGAG AAGTCGTACAAAAGTAAGTGCGATGAACTTGCAGAGAAGCAGAAGGCATTAGAAGAAAAG AAAGCTGAATCCTGTAGGCTTATTGCAGAGAAGGAAGCTAATGTTTCTGCAAAAGAGCGT GCTTTCCTGAACCAGTTTCAGGAGCTAAGGGATACAGCTGTCTCTGCCCTTTCAGAGGTG CGACAAAAATATAAGGTGGAGCTTGCTGGTATACTTGATGCCAATGGAAGCAAAGATAAA AAGGTAAGAACCTCAACCAATGACATGAATGCGTTGTGTGCTTCAGAGGAGAATACAACT GCTAGTGGGCTGGGTGAACCATCTGAAGCTTCACCTGTTGATGTTAAGCCACGTCCTGTA TTGAAGCAACTATGTGAGCAGATGGATACAGCAGGCCTTCTGAAATTTCTTTCAGAAAAT TGGAAAAAACTTTCTAGCCTTCGTGATGAACTTTCTGCTGCACTAAGATGTGCTACTGAC CCTGCACGCTTTGTGCTTGGTTCCTTGGAGGGTTTCTTCCCATCTGACCATACTAGTTCA CCTGGGAATAAACAGATTATTCTCCAAGGCCAGCGTAGAAGCTGCATTATTTTGATGGAA GCTATAACACCTGCACTAGCTACGAAGGAGCCAGGTGACAACCACCCTTGGAGCTCTGAA ATTAGGGAGCTGGCCAAGGCGATTGCAGAAGAGTGGAAGAGTAAGCTAGCTGAGGTTGAC CTCGATGCTTCTGATGGCTACTCATTGGAAGCACAGGCATTCCTGCAGCTTCTTACAACA TTTAATGTTGATTCGGTGCTTGACGAGGATGAACTATGCAAGCTTGTAGTTGCCGTCTCT CGTCGCAAGCAGACTGCTGAGCTTTGTCGCTCCCTTTGTCTTAATGAGAGAATACCAGAT ATTATCAAGGAATTGGTTAATAGACACAGGCAAATTGATGCAGTTCAATTTATACATGCC TTTGGGCTTTCTGAGAGCTTCCCTCCTGCACCTCTGCTGAAGACATATGTGGAGGAATTA AAAGATTCACTTGGCAATAATGGGGATGGCAACGCGGCTTCTCTGAAGGATGACCCAAAG ACTCGGGAACTACTTGCATTGAGGGCTGTAATAAAATGCATTGAAGAGTATAAGCTTCAG AAGGACTATCCTCTTGGACCTCTCCAGAAGCGTGTTGCTGAGCTAAAATCTAAGGGTGAG AAAAGGCCATTGGAAGCTGGGCGCCATAATGCAAAGAAGCCTCGCACTTTCGGCAATTCA GCTGCTCGCAGGCCACCAAATCCTGTTGGTTCAGCTGGTCGCAGACCTTCAGGCCCGGCT GGTACTTGGCAGCGGCCCCCTCCACCAATGCCTTCCTATCCTGATCGATATGGACATGCA GATCGGTACCATTACACTGCACCCTCTGCAACATATGATCCTCCTGCTTATGCTTCTTAC AGCGAACCATACAGTGCCTCAAAGCCATACCAGTACACACCAGGCTCAGTAGCTCCTGCA TCATACAACTCGAATCAGTTCAAAGTAGCTTATGGTGGACCTGGTGCCCCGCCAACAGCA GGCGGCTACGGAAGCTACAACGATGCAGCAGGGCAGTCTACTTCGAGTAGCTATTCGGGT TATTCTGGTTACCACCCTTCACTACCAAGGTTATAACTTGCATTTGCTATGCTACGCTGG TTATGATAAAGCACAATCTGGCTATCAATCTCGTTCAGAGTTCAGACCCCAGATGTAACC TTTAGATATACTCTAGTGGATTTTGTAGCTGTAACTGGTGTAGATCTTGATCTTCCAAGG CTGGTCGTGTGAGAAGCCGGTCGATTTTAGAGACTTTTTTTTTGTCCTGCTACATGTATC CAGTTGAATACTGTTGCGTGTACCTAACCTGTTTTGAATATTCTCC