Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0590600-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:24071176:24073668:1 gene:Os07g0590600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os07t0590600-00)
Sequence	ATGGCCGACACGCTCGCCTTCCCTCTCCCTCTCCGCGCGCCCGCCCCGCCGCCGTCTTCC CCCATCTCCCAGGCCTCCGCGCACTCCTCCCCTCCTCCCCGCATCTTCTCCCTCCTCTCG TCCTCCCACCCCGCGCCGTCTTCCTCCACCTCCCGCAAGCCCCGCCTCGGCCGCCCAGGA GGAGGAGGACAGCAGCCATGGCACCTCCCGCCGTCACTCTCACTCCCGGCGCGCCGAGCG CTGCTCGCCCTCCTCGACGATCCGGGGCGCGCCACCTCCCCGCGGGACCTCCTGTCAGGG CTCCCCGCGCCCGAGCTGGCTGCCGTGGTAGGCGCCCTCGGCTCACGCGGCCAGCCGGGC GCCGCGCTCGCCGCCCTCCACGCCGCGCGCGAGCTCCACGGCGAGGGCGTGCTCCACCAC CCGCGCGTCCTCGCCACCGCCATCCGCGTCATGGCGCGCGCGGGGCGCCTCGCCGAGGCA TCCGCGCTCCTCGACGCCGCGCCGGGCCCCGACGCCGGCGCGTACACGGCCCTCGTCTCC GCGTTCTCCCGGGCCGGCCGGTTCCGGGACGCGGTCGCCGTGTTCAGGCGCATGGTGGAC AGCGGAGTCCAGCCCGCCATCGTCACCTACAACGTCGTGCTCCACGTGTACTCCAAGATG GCCGTTCCATGGAAGGAGGTGGTGGAGCTCGTCGCCTCTATGAAGGAACACGGCGTCGCG CCGGATAGGTATACGTATAACACGCTCATCAGCTGTTGCCGCCGTAGGGCGCTTTACAAG GAGGCAGCACAGGTGTTCGATGAAATGAAGGCTTCTGGGTTCGAACCTGACAAGGTCACA TTCAATTCGCTGCTCGATGTATATGGTAAGGCGCGAAGGCACGACGAAGCAATTGAGGTG ATCCAGGAGATGGAGCGTGTGGGCTGCCCACCCAGTGTGGTGACCTACAACTCACTCATT TCGTCGTATGTGAAGGATGGGTTGTTGGAACAGGCAGTTGCGCTCAAGCAGGAGATGGAG GTGAAGGGAATGAAGCCAGATGTGGTGACATACACGACATTGATCTCTGGCCTTGACAGA GCTGGCAAAATTGATGCAGCAATTGTGGAATATGATGAAATGGTGAGGAACGGATGCAAG CCAAACCTGTGCACATACAATGCATTGATCAAGATGCATGGGGTGAGGGGGAAGTTCCCA GAGATGATGGCTGTCTTTGATGAGTTCAGGTCTGCTGGTTTTGTGCCGGATATTGTGACC TGGAACACGCTCTTAGCTGTGTTTGGGCAGAATGGTTTGGATTCTGAAGTGTCTGGGGTG TTCAAGGAGATGAAGAAAGCTGGTTACATCCCTGAGAGGGATACGTATGTTTCACTTATT AGTTCGTATAGTCGATGTGGTTTGTTTGACCTAGCAATGCAGATATACAAGAGGATGATG GAAGCCGGTATATACCCTGATGTTTCAACTTATAATGCTGTTCTGTCTGCCCTGGCTCGT GGTGGGCGTTGGGAACAAGCAGAAAAGTTGTTTGCTGAGATGGAGGAGCGAGATTGTAAG CCAGATGAGTATAGTTATTCTTCATTGCTTCATGCGTATGCAAATGCAAAGAGGTTAGAC AAAATGAAAGCTTTATCAGATGATATATATTCAGAGAGGATAGAACCACATAATTGGCTA GTGAAAACATTGGTCTTGGTCAACAGCAAAGTTAATAATTTAGCTGAGGCCGAAAAGGCT TTCCTGGAACTAAGACAGAAGCGGTGTTCATTGGATATTAATGTTCTTAATGCCATGGTT TCCATATATGGGAAAAACAGGATGGTCAGGAAGGTTGAGAAGATTCTTTCACTGATGAAG GAAAGTGCTATCAACCTCAGTGCTGCTACCTACAATAGCTTGATGCATATGTATTCTCGT TTAGGTGATTGTGAAAAGTGTGAAAATATTCTCACTGAGATCAAGTCAAGTGGTGTGCGC CCTGATAGATATTCTTATAACACTGTGATCTATGCATATGGAAGAAAAGGACAGATGAAA GAAGCATCAAGATTGTTCTCTGAGATGAAATGTTCAGGTCTGAAACCAGATGTTGTAACA TACAATATTTTTGTCAAGAGTTATGTCTCCAACTCAATGTTTGAGGAAGCTATTGAGTTA GTACGCTATATGGTCACTCAAGGTTGCAAGCCCAATGAGAGAACTTACAATTCAATAGTG GAGGGCTATTGTAGGAATGGAAAGTTGACTGATGCCAAAATATTTGTTAGCAACCTTCCT CAGCTTCATCCTGGATATTCTAAACAAGAACAGCAAAATTTGTTTGAAGTTATAGCAAAG TACACTCAAAGATAG

Peptide Sequence

PEP ID	Os07t0590600-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:24071176:24073668:1 gene:Os07g0590600 transcript:Os07t0590600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os07t0590600-00)
Sequence	MADTLAFPLPLRAPAPPPSSPISQASAHSSPPPRIFSLLSSSHPAPSSSTSRKPRLGRPG GGGQQPWHLPPSLSLPARRALLALLDDPGRATSPRDLLSGLPAPELAAVVGALGSRGQPG AALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVS AFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVA PDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEV IQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDR AGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVT WNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMM EAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLD KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVIAK YTQR

Transcript Sequence

Transcript ID	Os07t0590600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24071176:24073668:1 gene:Os07g0590600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os07t0590600-00)
Sequence	CCGCCATGGCCGACACGCTCGCCTTCCCTCTCCCTCTCCGCGCGCCCGCCCCGCCGCCGT CTTCCCCCATCTCCCAGGCCTCCGCGCACTCCTCCCCTCCTCCCCGCATCTTCTCCCTCC TCTCGTCCTCCCACCCCGCGCCGTCTTCCTCCACCTCCCGCAAGCCCCGCCTCGGCCGCC CAGGAGGAGGAGGACAGCAGCCATGGCACCTCCCGCCGTCACTCTCACTCCCGGCGCGCC GAGCGCTGCTCGCCCTCCTCGACGATCCGGGGCGCGCCACCTCCCCGCGGGACCTCCTGT CAGGGCTCCCCGCGCCCGAGCTGGCTGCCGTGGTAGGCGCCCTCGGCTCACGCGGCCAGC CGGGCGCCGCGCTCGCCGCCCTCCACGCCGCGCGCGAGCTCCACGGCGAGGGCGTGCTCC ACCACCCGCGCGTCCTCGCCACCGCCATCCGCGTCATGGCGCGCGCGGGGCGCCTCGCCG AGGCATCCGCGCTCCTCGACGCCGCGCCGGGCCCCGACGCCGGCGCGTACACGGCCCTCG TCTCCGCGTTCTCCCGGGCCGGCCGGTTCCGGGACGCGGTCGCCGTGTTCAGGCGCATGG TGGACAGCGGAGTCCAGCCCGCCATCGTCACCTACAACGTCGTGCTCCACGTGTACTCCA AGATGGCCGTTCCATGGAAGGAGGTGGTGGAGCTCGTCGCCTCTATGAAGGAACACGGCG TCGCGCCGGATAGGTATACGTATAACACGCTCATCAGCTGTTGCCGCCGTAGGGCGCTTT ACAAGGAGGCAGCACAGGTGTTCGATGAAATGAAGGCTTCTGGGTTCGAACCTGACAAGG TCACATTCAATTCGCTGCTCGATGTATATGGTAAGGCGCGAAGGCACGACGAAGCAATTG AGGTGATCCAGGAGATGGAGCGTGTGGGCTGCCCACCCAGTGTGGTGACCTACAACTCAC TCATTTCGTCGTATGTGAAGGATGGGTTGTTGGAACAGGCAGTTGCGCTCAAGCAGGAGA TGGAGGTGAAGGGAATGAAGCCAGATGTGGTGACATACACGACATTGATCTCTGGCCTTG ACAGAGCTGGCAAAATTGATGCAGCAATTGTGGAATATGATGAAATGGTGAGGAACGGAT GCAAGCCAAACCTGTGCACATACAATGCATTGATCAAGATGCATGGGGTGAGGGGGAAGT TCCCAGAGATGATGGCTGTCTTTGATGAGTTCAGGTCTGCTGGTTTTGTGCCGGATATTG TGACCTGGAACACGCTCTTAGCTGTGTTTGGGCAGAATGGTTTGGATTCTGAAGTGTCTG GGGTGTTCAAGGAGATGAAGAAAGCTGGTTACATCCCTGAGAGGGATACGTATGTTTCAC TTATTAGTTCGTATAGTCGATGTGGTTTGTTTGACCTAGCAATGCAGATATACAAGAGGA TGATGGAAGCCGGTATATACCCTGATGTTTCAACTTATAATGCTGTTCTGTCTGCCCTGG CTCGTGGTGGGCGTTGGGAACAAGCAGAAAAGTTGTTTGCTGAGATGGAGGAGCGAGATT GTAAGCCAGATGAGTATAGTTATTCTTCATTGCTTCATGCGTATGCAAATGCAAAGAGGT TAGACAAAATGAAAGCTTTATCAGATGATATATATTCAGAGAGGATAGAACCACATAATT GGCTAGTGAAAACATTGGTCTTGGTCAACAGCAAAGTTAATAATTTAGCTGAGGCCGAAA AGGCTTTCCTGGAACTAAGACAGAAGCGGTGTTCATTGGATATTAATGTTCTTAATGCCA TGGTTTCCATATATGGGAAAAACAGGATGGTCAGGAAGGTTGAGAAGATTCTTTCACTGA TGAAGGAAAGTGCTATCAACCTCAGTGCTGCTACCTACAATAGCTTGATGCATATGTATT CTCGTTTAGGTGATTGTGAAAAGTGTGAAAATATTCTCACTGAGATCAAGTCAAGTGGTG TGCGCCCTGATAGATATTCTTATAACACTGTGATCTATGCATATGGAAGAAAAGGACAGA TGAAAGAAGCATCAAGATTGTTCTCTGAGATGAAATGTTCAGGTCTGAAACCAGATGTTG TAACATACAATATTTTTGTCAAGAGTTATGTCTCCAACTCAATGTTTGAGGAAGCTATTG AGTTAGTACGCTATATGGTCACTCAAGGTTGCAAGCCCAATGAGAGAACTTACAATTCAA TAGTGGAGGGCTATTGTAGGAATGGAAAGTTGACTGATGCCAAAATATTTGTTAGCAACC TTCCTCAGCTTCATCCTGGATATTCTAAACAAGAACAGCAAAATTTGTTTGAAGTTATAG CAAAGTACACTCAAAGATAGTTGATAAATAGAATATATTCTTCGTATTATTGAGCATGAC TACCAGATAACACTAACCTGTTGACGTTGGTGACTTGTATTTCAAAGCAGAAACACACGG ATTAATTGTTTTCTGAATAAGGAAGAGAACACT