Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0588500-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:23965804:23970059:1 gene:Os07g0588500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-145 description:WD40 repeat-like domain containing protein. (Os07t0588500-00)
Sequence

ATGAGCACCGCTCCCACCGGCGATCCGCCGGTCCGCGTCGCCGTCGCTAGCGGCGGTGGC
GGGATGGGGTTGGGGAAGGAGCTGCGGGAGCCGCCGTCGGACGGCGTCTCCAGCCTCCGG
TTCTCCAAGCACAGCGATCGCCTGCTCGTCTCCTCCTGGGACAAGACGGTGCGGCTCTAC
GACGCGGAGGCCAATGTGCCCAGGGGGGTGTTCATGCACGCGGCGTCCGTCCTGGGTTGC
TGCTTTCACGACGACTCCTCGGGGTTCAGTGCCAGCGCCGACAACACCGTGCGGAGGTTG
GCCTTCAGTTCTGGTGGGAATTATTTCTTGGTACGCCATGATGCCGCAGTTAGTTGTGTC
GAGTACTCCTACTCTACTGGACAAGTTATCACTGGCAGCTGGGATAAGACTATAATGTGC
TGGGATCCAAGAGGTGTCAATGGGACAAGTCATCATACACTTGTTGGGACACATAACCAA
CCTGAACGTGTGTACTCACTTTCAGTATCAGGATATAACTTGGTTGTCGCAACAGCAGGA
AGGCATGTGAATGTTTATGATTTGCGCAGTATGTCTAGGCCTGAGCAACAGAGGGAGTCT
CCACTAAGGTATCAAACACGGTGTGTTCAATGCTATCCGAATGGAACTGGATTTGCTTTG
GGTTCTGTGGAAGGACGAGTTGCTATGGAGTTCTACGATCAATCTGAATCTGCTCCCTAT
AAGAAGTATAGTTTCAAGTGTCATCGAGTGCCTGAGGATGGAGAGACCAAAGTCTATCCT
GTCAACGCAATTTCCTTCCACCCAGTACACGGCACATTTGCCACTGGTGGATGTGATAGA
TTTGTGAACCTTTGGGATGGCGCTAACAGAAGGAAACTGTTTCAATTTCCCAGATACCCA
TCCAGCATCGCTGCTCTGTCTTTCAGTAGGGATGGCCGTCTGCTTGCTGTTGCATCCAGT
TACACTTACGAGGAGGGAGACATACCCCATCCGCCTGACGCAATCTTTATCCGTGATGTC
AACGAAGTACAAGTAAAGCCCAGGCCCAAGATCACATTCACTGATCCGCCATCAGTAGCG
TCCCCATCAGTTTGA

Peptide Sequence

PEP ID

Os07t0588500-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:23965804:23970059:1 gene:Os07g0588500 transcript:Os07t0588500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-145 description:WD40 repeat-like domain containing protein. (Os07t0588500-00)
Sequence

MSTAPTGDPPVRVAVASGGGGMGLGKELREPPSDGVSSLRFSKHSDRLLVSSWDKTVRLY
DAEANVPRGVFMHAASVLGCCFHDDSSGFSASADNTVRRLAFSSGGNYFLVRHDAAVSCV
EYSYSTGQVITGSWDKTIMCWDPRGVNGTSHHTLVGTHNQPERVYSLSVSGYNLVVATAG
RHVNVYDLRSMSRPEQQRESPLRYQTRCVQCYPNGTGFALGSVEGRVAMEFYDQSESAPY
KKYSFKCHRVPEDGETKVYPVNAISFHPVHGTFATGGCDRFVNLWDGANRRKLFQFPRYP
SSIAALSFSRDGRLLAVASSYTYEEGDIPHPPDAIFIRDVNEVQVKPRPKITFTDPPSVA
SPSV

Transcript Sequence

Transcript ID

Os07t0588500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:23965804:23970059:1 gene:Os07g0588500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-145 description:WD40 repeat-like domain containing protein. (Os07t0588500-00)
Sequence

CCTCCTCCTCCCCTCCTCTCCCCCACCACGAGACCTCGCATCGAATCCTTCCTACCCTAG
CCAAATCATCGCCGCCGGCATGAGCACCGCTCCCACCGGCGATCCGCCGGTCCGCGTCGC
CGTCGCTAGCGGCGGTGGCGGGATGGGGTTGGGGAAGGAGCTGCGGGAGCCGCCGTCGGA
CGGCGTCTCCAGCCTCCGGTTCTCCAAGCACAGCGATCGCCTGCTCGTCTCCTCCTGGGA
CAAGACGGTGCGGCTCTACGACGCGGAGGCCAATGTGCCCAGGGGGGTGTTCATGCACGC
GGCGTCCGTCCTGGGTTGCTGCTTTCACGACGACTCCTCGGGGTTCAGTGCCAGCGCCGA
CAACACCGTGCGGAGGTTGGCCTTCAGTTCTGGTGGGAATTATTTCTTGGTACGCCATGA
TGCCGCAGTTAGTTGTGTCGAGTACTCCTACTCTACTGGACAAGTTATCACTGGCAGCTG
GGATAAGACTATAATGTGCTGGGATCCAAGAGGTGTCAATGGGACAAGTCATCATACACT
TGTTGGGACACATAACCAACCTGAACGTGTGTACTCACTTTCAGTATCAGGATATAACTT
GGTTGTCGCAACAGCAGGAAGGCATGTGAATGTTTATGATTTGCGCAGTATGTCTAGGCC
TGAGCAACAGAGGGAGTCTCCACTAAGGTATCAAACACGGTGTGTTCAATGCTATCCGAA
TGGAACTGGATTTGCTTTGGGTTCTGTGGAAGGACGAGTTGCTATGGAGTTCTACGATCA
ATCTGAATCTGCTCCCTATAAGAAGTATAGTTTCAAGTGTCATCGAGTGCCTGAGGATGG
AGAGACCAAAGTCTATCCTGTCAACGCAATTTCCTTCCACCCAGTACACGGCACATTTGC
CACTGGTGGATGTGATAGATTTGTGAACCTTTGGGATGGCGCTAACAGAAGGAAACTGTT
TCAATTTCCCAGATACCCATCCAGCATCGCTGCTCTGTCTTTCAGTAGGGATGGCCGTCT
GCTTGCTGTTGCATCCAGTTACACTTACGAGGAGGGAGACATACCCCATCCGCCTGACGC
AATCTTTATCCGTGATGTCAACGAAGTACAAGTAAAGCCCAGGCCCAAGATCACATTCAC
TGATCCGCCATCAGTAGCGTCCCCATCAGTTTGA