Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0588100-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:23933038:23935489:-1 gene:Os07g0588100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0588100-00)
Sequence	ATGCGGCCATGGCGGCCGCCGCCGACCGCCGTCGCCTCCCTCGCCCACCAATGCTCCCTC CTCCTCCGCCGCCTCGCCGAGCGCCACTCGCCGGCCCCGACCTGCCCCTCCTCCTCCTTC CTCCGCGCCCTCCGCTGCCTCCACGCCCGCCTTCTCACCGCCGACCTCCTCCACGCCCCG TCCCACCCCCACCTCACCCTCCGCCTCATCCACCTCTACACCCTCTCCCCCGACCTCGCC ACCCCCGCGGCTCTCTTCCGCTCGGACCCCGACCCGGGCCCCGTCGCCGCCACCTCCCTC GTCGCCGCGCACGCCGCCGCCGGCCGCCTCCGGGACGCCGCCGCCTTCTTCGACGCCGTC CCGCCCGCCCGCCGCGACACCGTGCTCCACAACGCCATGATGTCCGCGTTCGCGAGGGCG TCCCTCGCCGCGCCCGCGGTCTCCGTGTTCCACGCCCTGCTGGGCTCCGGCTCACTCCGC CCCGACGATTACTCCTTCACCGCGCTCATCAGCGCCGTCGGCCAGATGCACAACCTCGCC GCGCCACACTGCACGCAGCTGCACTGCTCCGTGCTCAAGTCCGGCGCGGCGGCTGTCTTG TCTGTGTCCAATGCGCTCATTGCTCTGTACATGAAGTGCGACACGCCTGAGGCCTCCTGG GACGCACGGAAGGTGCTCGACGAAATGCCGGATAAGGATGACCTCACATGGACCACTATG GTCGTCGGCTATGTCAGGAGAGGCGATGTCAATGCTGCTAGATCAGTTTTTGAGGAGGTT GATGGTAAGTTTGATGTCGTGTGGAATGCGATGATCTCAGGGTATGTCCAATCGGGAATG TGTGCAGACGCCTTTGAGCTATTCAGGAGGATGGTGTCGGAAAAGGTTCCGCTTGATGAG TTCACTTTTACTAGCGTCCTGAGTGCGTGTGCAAATGCTGGATTCTTTGTGCATGGGAAG TCAGTCCATGGTCAGATTATTCGGTTACAGCCGAATTTCGTTCCTGAGGCAGCATTGCCT GTTAACAATGCGTTAGTGACTTTGTACTCGAAGGGTGGAAAGATTGTGATTGCGAAGAGG ATATTTGACACTATGAATCTGAAGGATGTTGTTTCTTGGAACACCATTTTGTCGGGATAC ATTGACAGCGGCTGTTTGGACAAAGCAGTTGAGGTATTTAAGGTGATGCCATATAAAAAC GATTTGTCATGGATGGTGATGGTCTCAGGATATGTCCACGGAGGGCTTTCAGAAGATGCT CTGAAACTGTTTAACCAGATGAGAGCTGAGGATGTCAAACCATGCGACTACACCTATGCG GGTGCAATAGCTGCCTGTGGTGAACTTGGAGCGCTGAAGCATGGAAGGCAGCTCCACGCA CATCTTGTACAGTGTGGATTTGAGGCAAGCAATTCTGCCGGAAATGCACTTCTAACAATG TATGCCAAATGTGGCGCTGTGAACGATGCTCGTCTTGTGTTCCTTGTGATGCCCAATTTA GACTCTGTCTCGTGGAATGCCATGATTTCAGCTCTTGGGCAACATGGACACGGTAGAGAG GCACTTGAGCTATTTGACCAGATGGTTGCTGAAGGCATAGATCCTGACCGAATTTCTTTC CTCACAATTTTGACAGCATGTAACCATGCTGGTTTGGTAGATGAAGGCTTCCATTATTTT GAGTCCATGAAGAGGGACTTTGGCATTAGTCCTGGAGAAGATCATTATGCACGGCTGATA GATTTACTTGGTCGCTCTGGAAGAATTGGAGAAGCTAGAGATTTGATCAAGACAATGCCT TTTGAGCCTACCCCGTCCATTTGGGAGGCGATTCTCTCTGGCTGTCGGACTAATGGAGAT ATGGAATTTGGTGCTTATGCAGCTGACCAGCTGTTTCGGATGATACCACAGCATGATGGA ACATACATCCTACTGTCTAACACATATTCAGCTGCTGGACGTTGGGTCGATGCTGCAAGA GTTAGAAAGCTAATGCGTGATCGTGGGGTCAAGAAGGAGCCTGGGTGCAGTTGGATAGAA GTAGGAAGTAAAATCCATGTGTTTCTTGTTGGTGATACAAAACATCCAGAAGCACAGGAA GTCTACCAATTCCTTGAAGTGATTGGTGCTAGGATGAGAAAGCTGGGATATGTTCCTGAT ACAAAGTTTGTGTTGCATGATATGGAGCCTCATGAAAAGGAATACATATTATTTGCACAT AGTGAGAAGCTGGCAGTTGGATTTGGACTTCTAAAGTTGCCTCCTGGAGCTACAGTTACT GTTTTAAAAAACTTGAGAATATGTGGTGACTGTCATACTGCAATGATGTTCATGTCAAAG GCGGTTGGACGGGAAATTGTTGTTAGAGATGTCAGGCGGTTTCATCATTTCAAGGATGGA GAATGTTCATGTGGTAATTATTGGTGA

Peptide Sequence

PEP ID	Os07t0588100-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:23933038:23935489:-1 gene:Os07g0588100 transcript:Os07t0588100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0588100-00)
Sequence	MRPWRPPPTAVASLAHQCSLLLRRLAERHSPAPTCPSSSFLRALRCLHARLLTADLLHAP SHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAV PPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLA APHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTM VVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDE FTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKR IFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDA LKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTM YAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISF LTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMP FEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAAR VRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPD TKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSK AVGREIVVRDVRRFHHFKDGECSCGNYW

Transcript Sequence

Transcript ID	Os07t0588100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:23933038:23935489:-1 gene:Os07g0588100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0588100-00)
Sequence	ATGCGGCCATGGCGGCCGCCGCCGACCGCCGTCGCCTCCCTCGCCCACCAATGCTCCCTC CTCCTCCGCCGCCTCGCCGAGCGCCACTCGCCGGCCCCGACCTGCCCCTCCTCCTCCTTC CTCCGCGCCCTCCGCTGCCTCCACGCCCGCCTTCTCACCGCCGACCTCCTCCACGCCCCG TCCCACCCCCACCTCACCCTCCGCCTCATCCACCTCTACACCCTCTCCCCCGACCTCGCC ACCCCCGCGGCTCTCTTCCGCTCGGACCCCGACCCGGGCCCCGTCGCCGCCACCTCCCTC GTCGCCGCGCACGCCGCCGCCGGCCGCCTCCGGGACGCCGCCGCCTTCTTCGACGCCGTC CCGCCCGCCCGCCGCGACACCGTGCTCCACAACGCCATGATGTCCGCGTTCGCGAGGGCG TCCCTCGCCGCGCCCGCGGTCTCCGTGTTCCACGCCCTGCTGGGCTCCGGCTCACTCCGC CCCGACGATTACTCCTTCACCGCGCTCATCAGCGCCGTCGGCCAGATGCACAACCTCGCC GCGCCACACTGCACGCAGCTGCACTGCTCCGTGCTCAAGTCCGGCGCGGCGGCTGTCTTG TCTGTGTCCAATGCGCTCATTGCTCTGTACATGAAGTGCGACACGCCTGAGGCCTCCTGG GACGCACGGAAGGTGCTCGACGAAATGCCGGATAAGGATGACCTCACATGGACCACTATG GTCGTCGGCTATGTCAGGAGAGGCGATGTCAATGCTGCTAGATCAGTTTTTGAGGAGGTT GATGGTAAGTTTGATGTCGTGTGGAATGCGATGATCTCAGGGTATGTCCAATCGGGAATG TGTGCAGACGCCTTTGAGCTATTCAGGAGGATGGTGTCGGAAAAGGTTCCGCTTGATGAG TTCACTTTTACTAGCGTCCTGAGTGCGTGTGCAAATGCTGGATTCTTTGTGCATGGGAAG TCAGTCCATGGTCAGATTATTCGGTTACAGCCGAATTTCGTTCCTGAGGCAGCATTGCCT GTTAACAATGCGTTAGTGACTTTGTACTCGAAGGGTGGAAAGATTGTGATTGCGAAGAGG ATATTTGACACTATGAATCTGAAGGATGTTGTTTCTTGGAACACCATTTTGTCGGGATAC ATTGACAGCGGCTGTTTGGACAAAGCAGTTGAGGTATTTAAGGTGATGCCATATAAAAAC GATTTGTCATGGATGGTGATGGTCTCAGGATATGTCCACGGAGGGCTTTCAGAAGATGCT CTGAAACTGTTTAACCAGATGAGAGCTGAGGATGTCAAACCATGCGACTACACCTATGCG GGTGCAATAGCTGCCTGTGGTGAACTTGGAGCGCTGAAGCATGGAAGGCAGCTCCACGCA CATCTTGTACAGTGTGGATTTGAGGCAAGCAATTCTGCCGGAAATGCACTTCTAACAATG TATGCCAAATGTGGCGCTGTGAACGATGCTCGTCTTGTGTTCCTTGTGATGCCCAATTTA GACTCTGTCTCGTGGAATGCCATGATTTCAGCTCTTGGGCAACATGGACACGGTAGAGAG GCACTTGAGCTATTTGACCAGATGGTTGCTGAAGGCATAGATCCTGACCGAATTTCTTTC CTCACAATTTTGACAGCATGTAACCATGCTGGTTTGGTAGATGAAGGCTTCCATTATTTT GAGTCCATGAAGAGGGACTTTGGCATTAGTCCTGGAGAAGATCATTATGCACGGCTGATA GATTTACTTGGTCGCTCTGGAAGAATTGGAGAAGCTAGAGATTTGATCAAGACAATGCCT TTTGAGCCTACCCCGTCCATTTGGGAGGCGATTCTCTCTGGCTGTCGGACTAATGGAGAT ATGGAATTTGGTGCTTATGCAGCTGACCAGCTGTTTCGGATGATACCACAGCATGATGGA ACATACATCCTACTGTCTAACACATATTCAGCTGCTGGACGTTGGGTCGATGCTGCAAGA GTTAGAAAGCTAATGCGTGATCGTGGGGTCAAGAAGGAGCCTGGGTGCAGTTGGATAGAA GTAGGAAGTAAAATCCATGTGTTTCTTGTTGGTGATACAAAACATCCAGAAGCACAGGAA GTCTACCAATTCCTTGAAGTGATTGGTGCTAGGATGAGAAAGCTGGGATATGTTCCTGAT ACAAAGTTTGTGTTGCATGATATGGAGCCTCATGAAAAGGAATACATATTATTTGCACAT AGTGAGAAGCTGGCAGTTGGATTTGGACTTCTAAAGTTGCCTCCTGGAGCTACAGTTACT GTTTTAAAAAACTTGAGAATATGTGGTGACTGTCATACTGCAATGATGTTCATGTCAAAG GCGGTTGGACGGGAAATTGTTGTTAGAGATGTCAGGCGGTTTCATCATTTCAAGGATGGA GAATGTTCATGTGGTAATTATTGGTGAATATTTTTTTCTGCGGTCACAGCAG