Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0586900-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:23868809:23871087:1 gene:Os07g0586900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHORT ROOT GENE 1 description:GRAS transcription factor domain containing protein. (Os07t0586900-01)
Sequence	ATGGATACGCTGTTTAGGTTGGTTAGCCTCCAAGCCGCCTCCGAGCAGCAGCAGCAGCAG CAGCAGTCGGCGTCCTACAACTCGAGGAGCACGACGTCGAGCGGGTCCAGGTCGTCGTCG CACCAGACGAACGCGTCCTACAGCTACTACCACCACAGCAGCAACAGCGGCGGCGGCGGC GGAGGCGGCGGAGGGTACTACTACGGCGGCCAGCAGCCGCCGCCGTCGCAGTACTACTAC CTGGAGCCGTACCAAGAAGAATGCGGCAACGCCCCACACCACCAGCTTTACATGGATGAA GACTTCTCCTCCTCGTCGTCGTCGAGGCACTTCCACCACGGCGCGCGGGTGCAGCAGCAG CAGCCGCCGGCGTCGTCCACGCCCACGGGGACGGCGCCGACGCCGCCGCTGTCGACCTCG TCCACCGCGGCGGGCGCCGGGCACGGCCTGTTCGAGGCGGCGGACCTGTCGTTCCCGCCG GACCTCAACCTCGACTTCTCGTCCCCGGCGTCGTCGTCCGGCGGCGGGACAGCGTCGTCG GGCGCGGTTGGGGGCGGCGGCGGCGGGAGGTGGGCTAGCCAGCTGCTGCTGGAGTGCGCG CGGTCGGTGGCCGCCCGCGACAGCCAGCGCGTGCAGCAGCTCATGTGGATGCTCAACGAG CTCGCGTCGCCGTACGGCGACGTGGAGCAGAAGCTGGCTTCCTACTTCTTGCAGGGGCTG TTCGCTCGGCTCACGGCGTCCGGGCCGCGCACGCTGCGCACGCTCGCCGCGGCGTCCGAC CGGAACACGTCGTTCGACTCGACGCGGCGCACGGCGCTGCGGTTCCAGGAGCTCAGCCCC TGGTCCTCGTTTGGGCACGTCGCCGCCAATGGCGCCATCCTCGAGTCCTTCCTGGAGGTC GCCGCCGCGGCGTCGTCGGAGACGCAGCGGTTCCACATCCTCGACCTGAGCAACACGTTC TGCACGCAGTGGCCGACGCTGCTGGAGGCGCTGGCCACGCGGTCCGCCGACGAGACGCCG CACCTCTCGATCACCACCGTGGTGTCCGCCGCGCCGTCCGCGCCCACGGCGGCGGTGCAG CGCGTCATGCGGGAGATCGGGCAGCGCATGGAGAAGTTCGCGCGGCTCATGGGCGTGCCC TTCCGCTTCCGCGCCGTGCACCACTCCGGGGACCTCGCGGAGCTCGACCTCGACGCGCTC GACCTCCGCGAGGGCGGCGCCACCACCGCGCTCGCCGTCAACTGCGTCAACTCGCTGCGC GGCGTGGTTCCCGGCAGGGCCCGCCGGCGCGACGCGTTCGCGGCGTCGCTCCGCCGGCTG GACCCGCGGGTCGTCACCGTCGTCGAGGAGGAGGCGGACCTGGTGGCGTCCGATCCCGAC GCGTCGTCGGCGACGGAGGAAGGCGGCGACACGGAGGCGGCGTTCCTCAAGGTGTTCGGC GAGGGCTTGCGCTTCTTCTCGGCGTACATGGATTCGCTCGAGGAGAGCTTCCCCAAGACG AGCAACGAGAGGCTGGCATTGGAGAGGGGAGCAGGGCGCGCCATCGTCGACTTGGTCTCG TGCCCGGCGTCGGAGTCGATGGAGCGGCGGGAGACGGCGGCGTCGTGGGCGCGGCGCATG CGGTCGGCCGGGTTCTCTCCGGTGGCATTCAGCGAGGACGTCGCCGACGACGTGCGATCG CTGCTGCGCCGGTACAGGGAAGGGTGGTCGATGCGCGAGGCCGGCACGGACGACTCGGCG GCCGGAGCCGGCGTCTTCCTCGCGTGGAAGGAGCAGCCTCTGGTGTGGGCAAGCGCGTGG CGGCCATGA

Peptide Sequence

PEP ID	Os07t0586900-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:23868809:23871087:1 gene:Os07g0586900 transcript:Os07t0586900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHORT ROOT GENE 1 description:GRAS transcription factor domain containing protein. (Os07t0586900-01)
Sequence	MDTLFRLVSLQAASEQQQQQQQSASYNSRSTTSSGSRSSSHQTNASYSYYHHSSNSGGGG GGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQ QPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASS GAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGL FARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEV AAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQ RVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLR GVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFG EGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRM RSAGFSPVAFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAW RP

Transcript Sequence

Transcript ID	Os07t0586900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:23868809:23871087:1 gene:Os07g0586900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHORT ROOT GENE 1 description:GRAS transcription factor domain containing protein. (Os07t0586900-01)
Sequence	TAGATGGATACGCTGTTTAGGTTGGTTAGCCTCCAAGCCGCCTCCGAGCAGCAGCAGCAG CAGCAGCAGTCGGCGTCCTACAACTCGAGGAGCACGACGTCGAGCGGGTCCAGGTCGTCG TCGCACCAGACGAACGCGTCCTACAGCTACTACCACCACAGCAGCAACAGCGGCGGCGGC GGCGGAGGCGGCGGAGGGTACTACTACGGCGGCCAGCAGCCGCCGCCGTCGCAGTACTAC TACCTGGAGCCGTACCAAGAAGAATGCGGCAACGCCCCACACCACCAGCTTTACATGGAT GAAGACTTCTCCTCCTCGTCGTCGTCGAGGCACTTCCACCACGGCGCGCGGGTGCAGCAG CAGCAGCCGCCGGCGTCGTCCACGCCCACGGGGACGGCGCCGACGCCGCCGCTGTCGACC TCGTCCACCGCGGCGGGCGCCGGGCACGGCCTGTTCGAGGCGGCGGACCTGTCGTTCCCG CCGGACCTCAACCTCGACTTCTCGTCCCCGGCGTCGTCGTCCGGCGGCGGGACAGCGTCG TCGGGCGCGGTTGGGGGCGGCGGCGGCGGGAGGTGGGCTAGCCAGCTGCTGCTGGAGTGC GCGCGGTCGGTGGCCGCCCGCGACAGCCAGCGCGTGCAGCAGCTCATGTGGATGCTCAAC GAGCTCGCGTCGCCGTACGGCGACGTGGAGCAGAAGCTGGCTTCCTACTTCTTGCAGGGG CTGTTCGCTCGGCTCACGGCGTCCGGGCCGCGCACGCTGCGCACGCTCGCCGCGGCGTCC GACCGGAACACGTCGTTCGACTCGACGCGGCGCACGGCGCTGCGGTTCCAGGAGCTCAGC CCCTGGTCCTCGTTTGGGCACGTCGCCGCCAATGGCGCCATCCTCGAGTCCTTCCTGGAG GTCGCCGCCGCGGCGTCGTCGGAGACGCAGCGGTTCCACATCCTCGACCTGAGCAACACG TTCTGCACGCAGTGGCCGACGCTGCTGGAGGCGCTGGCCACGCGGTCCGCCGACGAGACG CCGCACCTCTCGATCACCACCGTGGTGTCCGCCGCGCCGTCCGCGCCCACGGCGGCGGTG CAGCGCGTCATGCGGGAGATCGGGCAGCGCATGGAGAAGTTCGCGCGGCTCATGGGCGTG CCCTTCCGCTTCCGCGCCGTGCACCACTCCGGGGACCTCGCGGAGCTCGACCTCGACGCG CTCGACCTCCGCGAGGGCGGCGCCACCACCGCGCTCGCCGTCAACTGCGTCAACTCGCTG CGCGGCGTGGTTCCCGGCAGGGCCCGCCGGCGCGACGCGTTCGCGGCGTCGCTCCGCCGG CTGGACCCGCGGGTCGTCACCGTCGTCGAGGAGGAGGCGGACCTGGTGGCGTCCGATCCC GACGCGTCGTCGGCGACGGAGGAAGGCGGCGACACGGAGGCGGCGTTCCTCAAGGTGTTC GGCGAGGGCTTGCGCTTCTTCTCGGCGTACATGGATTCGCTCGAGGAGAGCTTCCCCAAG ACGAGCAACGAGAGGCTGGCATTGGAGAGGGGAGCAGGGCGCGCCATCGTCGACTTGGTC TCGTGCCCGGCGTCGGAGTCGATGGAGCGGCGGGAGACGGCGGCGTCGTGGGCGCGGCGC ATGCGGTCGGCCGGGTTCTCTCCGGTGGCATTCAGCGAGGACGTCGCCGACGACGTGCGA TCGCTGCTGCGCCGGTACAGGGAAGGGTGGTCGATGCGCGAGGCCGGCACGGACGACTCG GCGGCCGGAGCCGGCGTCTTCCTCGCGTGGAAGGAGCAGCCTCTGGTGTGGGCAAGCGCG TGGCGGCCATGATCGGATCGTCGTGATCGATGGATCAAAGCTCACCGGTGAGTGGAACAG CATGGAAGAAAAGAGCTCCATAGCTAAGCAAGCACGCATGCATATCCACCATGCATGGGG TAAGCTAGCAAGCTCTCTCGTGTGTGTCACGATCGACATTAATGGCGGCTCACACAAAGG CATGTAGGGTTTTGAAACAGCGTAGGAAGCTACAGAAATGGATCACGTACGTACGTACAC ATTGGGTTGCAGCGATCGAGGAGGGAGATGATAGTTTTAGTTCCTAGATTTGCATCCATT TTTATTCATCGATCGCCAACAAGTTCTTGGCGAGAAGATGATTTTGATTTGCTTGCTTCC ATCTTCTTGTTTATTTTTCCCCCTTTCGTTTGTGTTTCTTCTTAATTTGTAAGGGTTAAC GACATTTTTCTTCACTCTGGAGAAATTTTACGTGCATGGTTTTTATCATGCGTACCTGC