Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0586800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:23851371:23852411:-1 gene:Os07g0586800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os07t0586800-01)
Sequence

ATGGCAATGGCGGCGGCGGCGCAGGTGAACGTGTCGGTGTGGAGGGACGACGACTACAGG
AGGATGGTGATGGCGTGCTTGATAGAGGCGGTGTACCTGCTGGAGCTGGAGAGGCAGGAG
AGGAGGGACGCGGCGGCGGTGGCGCAGCAGTGGTGGAAGCCGTTCAGGTACAGGCTGGCG
CACGAGCTGGTCGACGAGAGGGACGGCTCCGTGTTCGGCGCCATCTTCGAGCGGGACCAC
CAGCCGGCGGCCGCGGTCGACGGCGAGGCGCCGCGGGCGGTGATCGCGTTCCGCGGCACG
CTGCTGCGGGGGCCGACCATCCGGCGCGACGTCGAGGACGAGCTCCGCCTGCTGGCGCGC
AACAGCCTCCGCGGCTCGGCGCGGCTCGCCGGCGCGCTCCAGGCGCTCAGGGCGACCATC
GAGAGGTTCGGGTCGGAGAACGTCTGCCTCTGCGGCCACTCCCTCGGCGCCGGCTTCGCC
CGCCAGGTCGCCAGGATGCTCGCCTCCTCCTCCTCGCCGCCGTCGCCGCGCCACCACCAC
CACGCCGCCGCGGCGTCGCTCGAGTTCCACCTCTTCAACGCGCCCTACCTGTCGCTGCCC
ATGGGCGTCAGGAGCGTCGTCAAGACGGCCGACTGCCTGCTCAAGGCGGTGCGCACCGGC
GTCGCCGCCGTCGGCCGGTGGCACGGCAAGGCGCTCAAGAACGTGGCCTACGCCAACTGC
ATCCTCGGCTACACGAGGCTCGAGAGCAGCAGGAGGTTGTGA

Peptide Sequence

PEP ID

Os07t0586800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:23851371:23852411:-1 gene:Os07g0586800 transcript:Os07t0586800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os07t0586800-01)
Sequence

MAMAAAAQVNVSVWRDDDYRRMVMACLIEAVYLLELERQERRDAAAVAQQWWKPFRYRLA
HELVDERDGSVFGAIFERDHQPAAAVDGEAPRAVIAFRGTLLRGPTIRRDVEDELRLLAR
NSLRGSARLAGALQALRATIERFGSENVCLCGHSLGAGFARQVARMLASSSSPPSPRHHH
HAAAASLEFHLFNAPYLSLPMGVRSVVKTADCLLKAVRTGVAAVGRWHGKALKNVAYANC
ILGYTRLESSRRL

Transcript Sequence

Transcript ID

Os07t0586800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:23851371:23852411:-1 gene:Os07g0586800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to triacylglycerol lipase. (Os07t0586800-01)
Sequence

TACGACATCGAGGGCGTCATCGAGTGAGTAGTGTGAGAGCTGAGCTGAGCTTAGCTTAGC
TTGCGATGGCAATGGCGGCGGCGGCGCAGGTGAACGTGTCGGTGTGGAGGGACGACGACT
ACAGGAGGATGGTGATGGCGTGCTTGATAGAGGCGGTGTACCTGCTGGAGCTGGAGAGGC
AGGAGAGGAGGGACGCGGCGGCGGTGGCGCAGCAGTGGTGGAAGCCGTTCAGGTACAGGC
TGGCGCACGAGCTGGTCGACGAGAGGGACGGCTCCGTGTTCGGCGCCATCTTCGAGCGGG
ACCACCAGCCGGCGGCCGCGGTCGACGGCGAGGCGCCGCGGGCGGTGATCGCGTTCCGCG
GCACGCTGCTGCGGGGGCCGACCATCCGGCGCGACGTCGAGGACGAGCTCCGCCTGCTGG
CGCGCAACAGCCTCCGCGGCTCGGCGCGGCTCGCCGGCGCGCTCCAGGCGCTCAGGGCGA
CCATCGAGAGGTTCGGGTCGGAGAACGTCTGCCTCTGCGGCCACTCCCTCGGCGCCGGCT
TCGCCCGCCAGGTCGCCAGGATGCTCGCCTCCTCCTCCTCGCCGCCGTCGCCGCGCCACC
ACCACCACGCCGCCGCGGCGTCGCTCGAGTTCCACCTCTTCAACGCGCCCTACCTGTCGC
TGCCCATGGGCGTCAGGAGCGTCGTCAAGACGGCCGACTGCCTGCTCAAGGCGGTGCGCA
CCGGCGTCGCCGCCGTCGGCCGGTGGCACGGCAAGGCGCTCAAGAACGTGGCCTACGCCA
ACTGCATCCTCGGCTACACGAGGCTCGAGAGCAGCAGGAGGTTGTGAGAGAGATCGACCA
CGAAGACGACGACGAATGATACGTGTACCTAGCTATCCATCATCTGATCATCCCCATGGA
GGAATTCAATTCGAGGAGAACAATAAAAAGCATCTGGCACACGAGGATGCACGGTTTAGG
CTGCCCTGCATGCTTGCTTGCTCTGTAAATGTTAAAAACGCTTTTGCTAATTGTGAATTA
TCTAGCTACTACTGTTCTTTT