Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0586700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:23842574:23845455:-1 gene:Os07g0586700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HRT transcription factor (Fragment). (Os07t0586700-01)
Sequence	ATGCCTGCGGCCTCCGCCGCCGTCCCAGCGAGGCTGAAGCGGGAGGACTACCCACGCACC AAGCACGACTCCCTCTTCTCCCCATGGAAGGTTCTTGTCGGGCCGTCGGACTGGGAGGAC CACGCCGCCGGCAAGGAAGGGATCCAGAGGTACAGGGTGCTCAACCTGCCGGAGAACTTC CCTGGCCTCTACGAGCTGGGCGTCGCGAGGGCCTCCGACGAGGGTATCAGGGCGGCTCGG CGGTGGAATGGATCCGGTGGTGGTGGCGTCGTCGTCGTGTACCTCGGGCAGGCCGACAGC GTCAGGGCGAGGCTCCAGCAGTACGGCCGGACGGGATCGCACTTGGACGCCGGGAACCCA CCGCCGTCCGCCGGCGAAGCGGAGACGAATACGCGGGCGACGGGGAATGGGTTGTTCAGG GAAGTTTTCGTCAGAGGCTACTCCTTGGTGTTCCGATGTGCTCTGATGGGTAACAAACAA GAAGCTGAGAAGACTGAGGCTCGGCTGCTTAGAGTGTTTGATTACGCATGGAACAAGCTT CAGAACGGTGGTCTTCGCCGTGAAGAAATACTTATCAAGTTAGAACAAGGGGCAGTCAAC AATAGATCATCTCTGCTTAGCAGAGTACGGCACTTCAAACAGGAAGTGTTCAGAGAGAAA GCAGGTATAAAGATAAGCAGAAATGGGTCTGTTGATGTCTCATCTGGCATTATGAAAAAT ATGCTCCCAAGAATTCGAACATTTGTTGGCTTCAGACCTCAGCTAGTTAACTCTGGTGAC AATGTTGACAAGGAAATTGGCATTCGCTGGAAAAATACATCTGAAGGTAACAGTTATGGC AAACAAGCACGTCGAAGTTCTGAAGGATACAAAGTCAAAAGAGTCAATGTTATAAAACGA AGAACTATGCCAGAACAAGATTCTAACGATGTTTGTGGAGTGATGCTGGAAGATGGCTCC TCTTGTCTTGACCATCCAGTACAAGGAAGGAAGAGGTGTGAATTACACAAAGGTAGAAGA CTAGGAAGAATCACAGTCAATCCTAAAGGCTCCTCTTGTAGCTATTCTTGCCAAGTTGAG ATTCCAGTTGTTGAATCCATATCTCCACTAACTGAAAATGAAAGCGAGTCAGATCAAGCA CAGCAAACCAGTGAACTCCTCTCCAAATTTTTGCCAGCAACAGTGAAAAAATCATCAAGA CCATGGTATAGCTTTGAAGCGAAAGAAATAAAAACTGGAGAAGCTCCTATAGAAGATGGA AAACAGGAAACCTCTGAGGTCATTGATATCTGTGAAGCCAAAAAGAGTGACAACTCTGCC TGCACCAACAAAGTAATTTCAGGAAGTAAAAAATGTCAGCTGCATAATGGTTGCAAAGCA GAAGAGTTTGTTTCATCTCGAGTCATTGATTTGCTCCAGAATGAAGAAAAGGTCAAAAGC ATGACAGTTGACAAGCTCAGTGGGGAGGAGATTTCTCATGGTAAATATCAGTCCCAAGAG AATCAGCCTTCCGGAAGAATGTGGTTTGAGCTGATCAAATTGCAGAATCCTACCAGCACA CTGTCATCCAAAGGCCAGGGACGTCAGAAAAGAGTGACAGGCAATGTCGCAGCTATCTGT GAAGCGTTGACGGACAACAGATGCCGTGAAACAATACCAATGGCAGGAAGAGAAAGATGC GATGCGCATGAAGGAATAAAGGTCACCGATGCTTCCTCTGTACCGTTTTCCGGAAGCTCA GGATGGCCATCAATCTGTGGTGCTCGAGCTTCGGATGGTTCTCCTTGTAAGAATCAGCCA ATTGCAGGGAGAAAGAGATGCGCGATGCATAAAGGCCAAAGAGCATGTCGGACCCCCTCA ATCGACTGA

Peptide Sequence

PEP ID	Os07t0586700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:23842574:23845455:-1 gene:Os07g0586700 transcript:Os07t0586700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HRT transcription factor (Fragment). (Os07t0586700-01)
Sequence	MPAASAAVPARLKREDYPRTKHDSLFSPWKVLVGPSDWEDHAAGKEGIQRYRVLNLPENF PGLYELGVARASDEGIRAARRWNGSGGGGVVVVYLGQADSVRARLQQYGRTGSHLDAGNP PPSAGEAETNTRATGNGLFREVFVRGYSLVFRCALMGNKQEAEKTEARLLRVFDYAWNKL QNGGLRREEILIKLEQGAVNNRSSLLSRVRHFKQEVFREKAGIKISRNGSVDVSSGIMKN MLPRIRTFVGFRPQLVNSGDNVDKEIGIRWKNTSEGNSYGKQARRSSEGYKVKRVNVIKR RTMPEQDSNDVCGVMLEDGSSCLDHPVQGRKRCELHKGRRLGRITVNPKGSSCSYSCQVE IPVVESISPLTENESESDQAQQTSELLSKFLPATVKKSSRPWYSFEAKEIKTGEAPIEDG KQETSEVIDICEAKKSDNSACTNKVISGSKKCQLHNGCKAEEFVSSRVIDLLQNEEKVKS MTVDKLSGEEISHGKYQSQENQPSGRMWFELIKLQNPTSTLSSKGQGRQKRVTGNVAAIC EALTDNRCRETIPMAGRERCDAHEGIKVTDASSVPFSGSSGWPSICGARASDGSPCKNQP IAGRKRCAMHKGQRACRTPSID

Transcript Sequence

Transcript ID	Os07t0586700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:23842574:23845455:-1 gene:Os07g0586700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HRT transcription factor (Fragment). (Os07t0586700-01)
Sequence	GCGGCCGCAGCGGCGCCGGCGGCTCCGGCGGCGCTGAGACTGAGAGCGCACCACTCCGCA GCCACAGGCGGACCGGATCGACGATGCCTGCGGCCTCCGCCGCCGTCCCAGCGAGGCTGA AGCGGGAGGACTACCCACGCACCAAGCACGACTCCCTCTTCTCCCCATGGAAGGTTCTTG TCGGGCCGTCGGACTGGGAGGACCACGCCGCCGGCAAGGAAGGGATCCAGAGGTACAGGG TGCTCAACCTGCCGGAGAACTTCCCTGGCCTCTACGAGCTGGGCGTCGCGAGGGCCTCCG ACGAGGGTATCAGGGCGGCTCGGCGGTGGAATGGATCCGGTGGTGGTGGCGTCGTCGTCG TGTACCTCGGGCAGGCCGACAGCGTCAGGGCGAGGCTCCAGCAGTACGGCCGGACGGGAT CGCACTTGGACGCCGGGAACCCACCGCCGTCCGCCGGCGAAGCGGAGACGAATACGCGGG CGACGGGGAATGGGTTGTTCAGGGAAGTTTTCGTCAGAGGCTACTCCTTGGTGTTCCGAT GTGCTCTGATGGGTAACAAACAAGAAGCTGAGAAGACTGAGGCTCGGCTGCTTAGAGTGT TTGATTACGCATGGAACAAGCTTCAGAACGGTGGTCTTCGCCGTGAAGAAATACTTATCA AGTTAGAACAAGGGGCAGTCAACAATAGATCATCTCTGCTTAGCAGAGTACGGCACTTCA AACAGGAAGTGTTCAGAGAGAAAGCAGGTATAAAGATAAGCAGAAATGGGTCTGTTGATG TCTCATCTGGCATTATGAAAAATATGCTCCCAAGAATTCGAACATTTGTTGGCTTCAGAC CTCAGCTAGTTAACTCTGGTGACAATGTTGACAAGGAAATTGGCATTCGCTGGAAAAATA CATCTGAAGGTAACAGTTATGGCAAACAAGCACGTCGAAGTTCTGAAGGATACAAAGTCA AAAGAGTCAATGTTATAAAACGAAGAACTATGCCAGAACAAGATTCTAACGATGTTTGTG GAGTGATGCTGGAAGATGGCTCCTCTTGTCTTGACCATCCAGTACAAGGAAGGAAGAGGT GTGAATTACACAAAGGTAGAAGACTAGGAAGAATCACAGTCAATCCTAAAGGCTCCTCTT GTAGCTATTCTTGCCAAGTTGAGATTCCAGTTGTTGAATCCATATCTCCACTAACTGAAA ATGAAAGCGAGTCAGATCAAGCACAGCAAACCAGTGAACTCCTCTCCAAATTTTTGCCAG CAACAGTGAAAAAATCATCAAGACCATGGTATAGCTTTGAAGCGAAAGAAATAAAAACTG GAGAAGCTCCTATAGAAGATGGAAAACAGGAAACCTCTGAGGTCATTGATATCTGTGAAG CCAAAAAGAGTGACAACTCTGCCTGCACCAACAAAGTAATTTCAGGAAGTAAAAAATGTC AGCTGCATAATGGTTGCAAAGCAGAAGAGTTTGTTTCATCTCGAGTCATTGATTTGCTCC AGAATGAAGAAAAGGTCAAAAGCATGACAGTTGACAAGCTCAGTGGGGAGGAGATTTCTC ATGGTAAATATCAGTCCCAAGAGAATCAGCCTTCCGGAAGAATGTGGTTTGAGCTGATCA AATTGCAGAATCCTACCAGCACACTGTCATCCAAAGGCCAGGGACGTCAGAAAAGAGTGA CAGGCAATGTCGCAGCTATCTGTGAAGCGTTGACGGACAACAGATGCCGTGAAACAATAC CAATGGCAGGAAGAGAAAGATGCGATGCGCATGAAGGAATAAAGGTCACCGATGCTTCCT CTGTACCGTTTTCCGGAAGCTCAGGATGGCCATCAATCTGTGGTGCTCGAGCTTCGGATG GTTCTCCTTGTAAGAATCAGCCAATTGCAGGGAGAAAGAGATGCGCGATGCATAAAGGCC AAAGAGCATGTCGGACCCCCTCAATCGACTGAGCAGACATGATATGAGTGATGCTCAATT GCTTACGTTCATTCAGTCATTTGTTGTAATAGCATTTTCAGTAAGGAAAAGTAAACCAAA GAAAGCTGTTTTCTTGCCCCGAGTTTTGATTGGTTATTCGTTGCTGCTTGTAAACCAAAA TAGACAGTCAAACAAACCATGTAACTTGATACAACTTTTTTTAGGGACTCAACCTCTATT ACC