Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0585200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:23764832:23765807:-1 gene:Os07g0585200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bifunctional inhibitor/plant lipid transfer protein/seed storage domain containing protein. (Os07t0585200-01)
Sequence

ATGGCGCGGCACACGTGGGTCATCTCCTTGCTCCTCACCTCCGCCGTGGCTGGTGCGTCG
CGGCAGCCGCCCGCGACCGCAAGCCAAGGACCGACATGGACCGGCCTTGCCGGAGAGCAA
GAAATGGAAGGAGCAGCCACCGCTTCATCCGCAGCGCCGGTGGCTTCGCTGTTCCCCGGC
CTCCCGCCATTGCCGCCGCTGCCAGCGCTCCCCGCTCTGCCGCCGCTTCCACCGCTGCCC
GCCTTACCGCCGCTGCCACCGTTGCCGCCATTGCCGCCGCTCCCTTCACCCGGGACGACG
ACGACGCGGCCGCGGCCACCATCGCCACCGCCGACGGAGTGCCTGACGTCGCTCGTGGAG
CTGCTGCCGTGCGTCGACTACCTCACCAACGACGCCACCGCGCCGCCGGGCGCCTGCTGC
GACGGATTCAGGTCGCTCGTTGGCAGCGCGCTCATCTGCCTCTGCCACGGCATCAATGGC
GACATGAGCAGGATGATCTCCAGGCCCATCGATCCGGTCCGCATGGTGCTCCTTCCCGCC
ATGTGCAGCACCATGCTGCCGCCGCAGTCGCTTTTCATATGCTACACGGAAACAGTGCCA
CCATTGGTGCCATAG

Peptide Sequence

PEP ID

Os07t0585200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:23764832:23765807:-1 gene:Os07g0585200 transcript:Os07t0585200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bifunctional inhibitor/plant lipid transfer protein/seed storage domain containing protein. (Os07t0585200-01)
Sequence

MARHTWVISLLLTSAVAGASRQPPATASQGPTWTGLAGEQEMEGAATASSAAPVASLFPG
LPPLPPLPALPALPPLPPLPALPPLPPLPPLPPLPSPGTTTTRPRPPSPPPTECLTSLVE
LLPCVDYLTNDATAPPGACCDGFRSLVGSALICLCHGINGDMSRMISRPIDPVRMVLLPA
MCSTMLPPQSLFICYTETVPPLVP

Transcript Sequence

Transcript ID

Os07t0585200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:23764832:23765807:-1 gene:Os07g0585200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bifunctional inhibitor/plant lipid transfer protein/seed storage domain containing protein. (Os07t0585200-01)
Sequence

GAGAAGATCATGGCGCGGCACACGTGGGTCATCTCCTTGCTCCTCACCTCCGCCGTGGCT
GGTGCGTCGCGGCAGCCGCCCGCGACCGCAAGCCAAGGACCGACATGGACCGGCCTTGCC
GGAGAGCAAGAAATGGAAGGAGCAGCCACCGCTTCATCCGCAGCGCCGGTGGCTTCGCTG
TTCCCCGGCCTCCCGCCATTGCCGCCGCTGCCAGCGCTCCCCGCTCTGCCGCCGCTTCCA
CCGCTGCCCGCCTTACCGCCGCTGCCACCGTTGCCGCCATTGCCGCCGCTCCCTTCACCC
GGGACGACGACGACGCGGCCGCGGCCACCATCGCCACCGCCGACGGAGTGCCTGACGTCG
CTCGTGGAGCTGCTGCCGTGCGTCGACTACCTCACCAACGACGCCACCGCGCCGCCGGGC
GCCTGCTGCGACGGATTCAGGTCGCTCGTTGGCAGCGCGCTCATCTGCCTCTGCCACGGC
ATCAATGGCGACATGAGCAGGATGATCTCCAGGCCCATCGATCCGGTCCGCATGGTGCTC
CTTCCCGCCATGTGCAGCACCATGCTGCCGCCGCAGTCGCTTTTCATATGCTACACGGAA
ACAGTGCCACCATTGGTGCCATAGTTCTACGGTGCATATGCTACTGTCTTCAGTAACGCG
TTCGGCGTTCGGCCATACCGTGCAAATTACTTTACAATTCTTGTCTTCTGAACATTCGAT
TTCGAAATTTTGTTTTTCAGACTGAGACCGATCGATGTAAAAGCAGATGGGATATAAAGT
TTCATCAAGATTAACTGCTGATTTTCTT