Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0582400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:23582270:23584330:1 gene:Os07g0582400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proton myo-inositol cotransporter. (Os07t0582400-01)
Sequence

ATGGCTTCCGCCGCGCTGCCGGAGGCCGTCGCGCCGAAGAAGAAGGGCAACGTCCGGTTC
GCCTTCGCCTGCGCCATCCTCGCCTCCATGACCTCCATCCTCCTCGGCTACGATATCGGG
GTGATGAGCGGGGCGTCGCTGTACATCAAGAAGGACTTCAACATCAGTGACGGGAAGGTG
GAGGTTCTCATGGGCATACTGAACCTCTACTCGCTCATCGGCTCCTTCGCGGCGGGGCGG
ACGTCGGACTGGATCGGCCGGCGGTACACCATCGTGTTCGCCGCCGTCATATTCTTCGCG
GGGGCGTTCCTCATGGGGTTCGCCGTCAACTACGCCATGCTCATGTTCGGCCGCTTCGTG
GCCGGCATCGGCGTGGGCTACGCGCTCATGATCGCGCCGGTGTACACCGCCGAGGTGTCG
CCGGCGTCGGCGCGTGGCTTCCTGACGTCGTTCCCGGAGGTGTTCATCAACTTCGGCATC
CTGCTCGGGTACGTCTCGAACTATGCTTTCTCCCGCTTGCCGCTGAACCTCGGGTGGCGC
ATCATGCTCGGCATCGGCGCGGCGCCGTCCGTGCTGCTCGCGCTCATGGTGCTCGGCATG
CCGGAGTCGCCGCGGTGGCTGGTCATGAAGGGACGCCTCGCGGACGCCAAGGTGGTGCTG
GAGAAGACCTCCGACACGGCGGAGGAGGCCGCGGAGCGCCTGGCCGACATCAAGGCCGCC
GCCGGCATCCCCGAGGAGCTCGACGGCGACGTGGTGACCGTCCCCAAGAGAGGGAGCGGA
AACGAGAAGCGGGTGTGGAAGGAGCTCATCCTGTCCCCGACCCCGGCCATGCGGCGCATC
CTGCTGTCGGGCATCGGCATCCACTTCTTCCAGCAGGCGTCGGGCATCGACTCCGTCGTG
CTCTACAGCCCGCGCGTGTTCAAGAGCGCCGGCATCACCGACGACAAACACCTCCTCGGC
ACCACCTGCGCCGTCGGTGTCACCAAGACGCTCTTCATCCTCGTGGCGACCTTCTTCCTC
GACCGCGTCGGGCGGCGGCCGCTGCTGCTGAGCAGCACGGGCGGGATGATCCTCTCCCTC
ATCGGCCTCGGCGCCGGGCTCACCGTCGTCGGCCAGCACCCCGACGCCAAGATACCTTGG
GCCATCGGCCTAAGCATCGCCTCCACCCTCGCCTACGTCGCCTTCTTCTCCATCGGCCTT
GGCCCCATCACGTGGGTGTACAGCTCGGAGATCTTCCCGCTCCAGGTGCGCGCGCTGGGC
TGCTCGCTCGGCGTCGCCGCCAACCGCGTCACCAGCGGCGTCATCTCCATGACCTTCCTG
TCGCTGTCCAAGGCCATCACCATCGGCGGCAGCTTCTTCCTCTACTCCGGCATCGCCGCG
CTCGCCTGGGTGTTCTTCTACACCTACCTCCCGGAGACCCGCGGCCGGACGCTGGAGGAG
ATGAGCAAGCTGTTCGGCGACACGGCCGCCGCCTCGGAATCAGACGAGCCAGCCAAGGAG
AAGAAGAAGGTGGAAATGGCCGCCACTAACTGA

Peptide Sequence

PEP ID

Os07t0582400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:23582270:23584330:1 gene:Os07g0582400 transcript:Os07t0582400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proton myo-inositol cotransporter. (Os07t0582400-01)
Sequence

MASAALPEAVAPKKKGNVRFAFACAILASMTSILLGYDIGVMSGASLYIKKDFNISDGKV
EVLMGILNLYSLIGSFAAGRTSDWIGRRYTIVFAAVIFFAGAFLMGFAVNYAMLMFGRFV
AGIGVGYALMIAPVYTAEVSPASARGFLTSFPEVFINFGILLGYVSNYAFSRLPLNLGWR
IMLGIGAAPSVLLALMVLGMPESPRWLVMKGRLADAKVVLEKTSDTAEEAAERLADIKAA
AGIPEELDGDVVTVPKRGSGNEKRVWKELILSPTPAMRRILLSGIGIHFFQQASGIDSVV
LYSPRVFKSAGITDDKHLLGTTCAVGVTKTLFILVATFFLDRVGRRPLLLSSTGGMILSL
IGLGAGLTVVGQHPDAKIPWAIGLSIASTLAYVAFFSIGLGPITWVYSSEIFPLQVRALG
CSLGVAANRVTSGVISMTFLSLSKAITIGGSFFLYSGIAALAWVFFYTYLPETRGRTLEE
MSKLFGDTAAASESDEPAKEKKKVEMAATN

Transcript Sequence

Transcript ID

Os07t0582400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:23582270:23584330:1 gene:Os07g0582400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proton myo-inositol cotransporter. (Os07t0582400-01)
Sequence

ACACAGAAGGCGAGCTCTCGACCGCCACTACTGTACACGGCCCAGAGCGAGCCTCCTCCT
CCTCTGCACCACCGGAGATGGCTTCCGCCGCGCTGCCGGAGGCCGTCGCGCCGAAGAAGA
AGGGCAACGTCCGGTTCGCCTTCGCCTGCGCCATCCTCGCCTCCATGACCTCCATCCTCC
TCGGCTACGATATCGGGGTGATGAGCGGGGCGTCGCTGTACATCAAGAAGGACTTCAACA
TCAGTGACGGGAAGGTGGAGGTTCTCATGGGCATACTGAACCTCTACTCGCTCATCGGCT
CCTTCGCGGCGGGGCGGACGTCGGACTGGATCGGCCGGCGGTACACCATCGTGTTCGCCG
CCGTCATATTCTTCGCGGGGGCGTTCCTCATGGGGTTCGCCGTCAACTACGCCATGCTCA
TGTTCGGCCGCTTCGTGGCCGGCATCGGCGTGGGCTACGCGCTCATGATCGCGCCGGTGT
ACACCGCCGAGGTGTCGCCGGCGTCGGCGCGTGGCTTCCTGACGTCGTTCCCGGAGGTGT
TCATCAACTTCGGCATCCTGCTCGGGTACGTCTCGAACTATGCTTTCTCCCGCTTGCCGC
TGAACCTCGGGTGGCGCATCATGCTCGGCATCGGCGCGGCGCCGTCCGTGCTGCTCGCGC
TCATGGTGCTCGGCATGCCGGAGTCGCCGCGGTGGCTGGTCATGAAGGGACGCCTCGCGG
ACGCCAAGGTGGTGCTGGAGAAGACCTCCGACACGGCGGAGGAGGCCGCGGAGCGCCTGG
CCGACATCAAGGCCGCCGCCGGCATCCCCGAGGAGCTCGACGGCGACGTGGTGACCGTCC
CCAAGAGAGGGAGCGGAAACGAGAAGCGGGTGTGGAAGGAGCTCATCCTGTCCCCGACCC
CGGCCATGCGGCGCATCCTGCTGTCGGGCATCGGCATCCACTTCTTCCAGCAGGCGTCGG
GCATCGACTCCGTCGTGCTCTACAGCCCGCGCGTGTTCAAGAGCGCCGGCATCACCGACG
ACAAACACCTCCTCGGCACCACCTGCGCCGTCGGTGTCACCAAGACGCTCTTCATCCTCG
TGGCGACCTTCTTCCTCGACCGCGTCGGGCGGCGGCCGCTGCTGCTGAGCAGCACGGGCG
GGATGATCCTCTCCCTCATCGGCCTCGGCGCCGGGCTCACCGTCGTCGGCCAGCACCCCG
ACGCCAAGATACCTTGGGCCATCGGCCTAAGCATCGCCTCCACCCTCGCCTACGTCGCCT
TCTTCTCCATCGGCCTTGGCCCCATCACGTGGGTGTACAGCTCGGAGATCTTCCCGCTCC
AGGTGCGCGCGCTGGGCTGCTCGCTCGGCGTCGCCGCCAACCGCGTCACCAGCGGCGTCA
TCTCCATGACCTTCCTGTCGCTGTCCAAGGCCATCACCATCGGCGGCAGCTTCTTCCTCT
ACTCCGGCATCGCCGCGCTCGCCTGGGTGTTCTTCTACACCTACCTCCCGGAGACCCGCG
GCCGGACGCTGGAGGAGATGAGCAAGCTGTTCGGCGACACGGCCGCCGCCTCGGAATCAG
ACGAGCCAGCCAAGGAGAAGAAGAAGGTGGAAATGGCCGCCACTAACTGATCAAACTAAC
CGCAAAATCACCAAATCCTAAGGGTTTTCTTGCAAAAACGTGTGCTGTACTGGCTAGCTA
GCAAGTAGTAGCAGCAACGTGGGAAGATTCGCTGATCCGGCGTTGCTGGAGAGCGACGGC
CGGCGACGACAAAGCTGAGCTCCAGCTCGAGACTTCTTAAAATCATCTTCAAGTACATGG
ATTTTATTTTGCTCTTTGCTTTGTCCGTAAAAGTTGTACTATGCGATGAAGAATACCAGT
ATGTAGCAAGGCTGAGGTTGTGTGTAGCTACTAGAAGTGTCAGTCACGTTGTTCTTGTAA
GAAATGTTTAACTGTTAATTAAGCAGTATTGTTGCAGTAATC