Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0580900-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:23506852:23509286:-1 gene:Os07g0580900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl diphosphate synthase 1 description:Similar to GGDP synthase. (Os07t0580900-01);Similar to GGDP synthase. (Os07t0580900-02)
Sequence	ATGGCTGCCTTCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCC GCCGCGATGGCTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGG TTCTGCGCCATCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCG GCGACGGGGTTTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCG CTGGACGCGTCGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTAC GCGCTGCTGGCGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTG GTCGGGGGGCGGGAGGCCTGGGCGATGCCCGCCGCCGCCGCCGTCGAGATGGTGCACACC ATGTCGCTCGTCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAG CCCACCTGCCACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTC TCCCTCTCCTTCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGAC AAGCACCCCGCCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAG GGCCTAGTCGCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCT CTTGAACGTCTTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTG GTTATTGGGGCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTAT GCGAGATCGATAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCT TCTGAGGAGCTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCG AAATTACTTGGGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCAAGG GAACAACTTTCAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTAT ATTGCCTATCGGCAGAACTGA

Peptide Sequence

PEP ID	Os07t0580900-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:23506852:23509286:-1 gene:Os07g0580900 transcript:Os07t0580900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl diphosphate synthase 1 description:Similar to GGDP synthase. (Os07t0580900-01);Similar to GGDP synthase. (Os07t0580900-02)
Sequence	MAAFPPLAASRVRISPLIPAAAMAGTAGAAAASYAQHRRRFCAIVATAAASPVPAAAAAA ATGFDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAV VGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALL SLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVP LERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKS SEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANY IAYRQN

Transcript Sequence

Transcript ID	Os07t0580900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:23506852:23509286:-1 gene:Os07g0580900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl diphosphate synthase 1 description:Similar to GGDP synthase. (Os07t0580900-01);Similar to GGDP synthase. (Os07t0580900-02)
Sequence	GTGGAACGGAGCCACCGCCCAACTCGCCCCCAAAGTTGCCCATCTAGATAAGAAGAAGCG TCGCAACTCACGGTCGCAGTGCCACGCCCCACTTCATATCCTTTCCCTCCCCCAACTGAA CGAAAAAAACAACAGAGAAAAACTCCTCCCTCCTCCTCCCCCTCTGAAGCCATGGCTGCC TTCCCCCCGCTCGCCGCCTCCCGCGTCCGCATCTCCCCTCTCATCCCCGCCGCCGCGATG GCTGGGACAGCAGGGGCGGCGGCGGCGTCGTACGCGCAGCACCGGCGGAGGTTCTGCGCC ATCGTGGCGACCGCGGCGGCGTCACCGGTGCCGGCCGCGGCGGCGGCGGCGGCGACGGGG TTTGATTTTAACGCGTATATGGGTGAGAAGGCTGCGGCGGTGAACCGGGCGCTGGACGCG TCGATCCCGGCGGACGAGCCGCCCGCGGCGCTCCACGAGGCGATGCGGTACGCGCTGCTG GCGGGCGGGAAGCGGGTGCGGCCCGCGCTGTGCCTGGCGGCGTGCGCGGTGGTCGGGGGG CGGGAGGCCTGGGCGATGCCCGCCGCCGCCGCCGTCGAGATGGTGCACACCATGTCGCTC GTCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGGAAGCCCACCTGC CACGTCGTCTACGGGGAGCCCATCGCCGTGCTCACCGGCGACGCGCTGCTCTCCCTCTCC TTCCACCACATGGCCAGGTTCGACTCCTACCCTCCGGACATCGACGCTGACAAGCACCCC GCCCGCGTCGTCCGCGCCATTGGCGAGCTCGCGCGCTGCATAGGCTCCGAGGGCCTAGTC GCCGGCCAGGTTGTTGATCTTGAGATGACTGGATCGACCGAAACTGTACCTCTTGAACGT CTTGAGTACATCCATCTCCACAAAACTGCTGCATTGCTTGAGGCATCAGTGGTTATTGGG GCAATCTTGGGAGGTGGCTCTGATGAGCAGATTGAAAGTTTGCGCATGTATGCGAGATCG ATAGGATTGTTGTTCCAGGTTGTTGATGATATACTTGATGTGACCAAGTCTTCTGAGGAG CTCGGCAAGACAGCAGGGAAGGACTTGGCGAGTGACAAGACGACATACCCGAAATTACTT GGGCTGGAGAAATCACGGGAGTTTGCAGAAAAGTTGCTTTCTGATGCAAGGGAACAACTT TCAGGATTTGATCAAGAGACCGCAGCACCACTTCTGCACCTGGCCAATTATATTGCCTAT CGGCAGAACTGAGGTTCGTTTTACAATGAGTGTCAATGTAAGCTTTGATTCAGGGATGAG CTTGTCTTGGAAATTGTTCTGTTGAACATGTGTTTCAGTGATGTTCTTCTGTTTACAGCA ATTGGGATCAATGTTTCTCTAACAGCTATATATATGTATATTCTTGGTTCCAAGCATGCA GAAAACTTCAATCAGAGAAAGTGTTTAGTTACAGTGCCGTAGTAAATAAATCGGTTATAA TTGATTCCTGTCTATAGGTGTGCATTCAGTCTTTTGGTCAATTCGCTTTGTAGCAAAATT CAGTTAGTCAAAACTCAGGAATGAATTGTTATTGGGAAAAGGCAAGACCGAAATTCGGTT AATCCTGTCTATTGCTCAAAAACCTATACAAGCCTTTCATAGTGAATGTAGCCCCTGCAT AAGGTTTCCTGTACAGGTACAGTAGGACCTTGACTAAATGTTTTTCATTGGAATAATGGA ATGGTTATAAGCTGCACCTTTCTTGTTCTTTTCT