Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0578800-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:23425405:23427883:-1 gene:Os07g0578800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0578800-00)
Sequence	ATGTCTCTTGCTGCGGTTGCTTCTCCACATTTCCCACCGTCATGGGCCTATCAGATCCGT ATGGCTGCTTCCCAGGGCCAATTTCTCCACGCCATCTCTCTCTTCCTACAAATGCGTGCC TCTGTTGCGCCCCGATCATCTGTTCCGGCCTCCCTCCCTGCTGCACTCAAGTCCTGCGCC GGCCTTGGCCTCTGCACTCTTGCTGCATCTCTCCATGCTCTCGCCATCCGCTCCGGTTCC TTCGCTGACCGCTTTACCGCCAATGCCCTCCTCAACCTCTGCATCAAGCTCCCAGGTTTT CATCACCCCTTTGGGACAAATGGGCCTTCTGGGGAAGGAGGCCTGGAATCAGCTGCATAT GAGAGCATGCGGAAAGTGTTTGATGAAATGCTCGAGAGGGATGCCGTGTCTTGGAACACT TTGATATTGGGATGTGCAGAGCACAAGAGGCACCAAGAAGCTCTGAGCATGGTTAGGGAG ATGTGGAGGGATGGATTTATGCCTGACACGTTTACACTGTCAACTGTGCTGCCAATCTTT GCGGAGTGCGCTGATATCAAGAGAGGCATGGTGGTCCATGGGTATGCTATCAAGAATGGA TTTGACAATGATGTTTTTGTTGGAAGTAGCTTGATTGATATGTATGCTAACTGCACTCAA ATGGATTACTCTATGAAGGTGTTCGACAGCTTCTCAGACTGTGATGCAGTTCTGTGGAAC TCAATGCTTGCAGGTTATGCACAAAATGGGTCAGTTGAGGAGGCTCTTGGAATATTCCGT CGGATGCTGCAAGCTGGAGTGAGGCCCGTGCCTGTGACTTTCTCAAGCCTAATACCTGCC TTTGGCAATTTGTCATTGTTGCGTCTTGGGAAGCAGCTGCATGCCTATTTGATCCGTGCC AGATTTAATGATAACATATTTATATCTAGCTCCCTTATTGACATGTATTGCAAGTGTGGG AATGTTGACATAGCTCGTCGCGTTTTTAATGGGATACAATCACCTGACATCGTATCATGG ACTGCGATGATCATGGGTTATGCATTGCACGGTCCAACAACAGAGGCTTTTGTGCTGTTT GAGAGAATGGAGTTGGGAAATGTGAAGCCTAATCATATAACTTTTCTAGCAGTTTTGACT GCATGTAGTCATGCTGGGTTGGTGGACAATGGATGGAAGTATTTTAACAGTATGTCTAAC CAGTATGGATTTGTTCCATCCCTTGAGCATTGTGCTGCACTTGCAGACACCCTTGGTCGT GCAGGAGATTTAGATGAAGCATATAATTTCATCTCTGAAATGAAAATAAAACCAACTTCA AGCGTCTGGTCCACCTTGTTAAGGGCTTGCAGGGTCCATAAAAACACTGTTTTAGCTGAG GAAGTGGCCAAGAAGATCTTTGAGCTTGAACCTAAAAGCATGGGATCTCATGTAATTTTG TCAAACATGTATTCGGCTTCTGGGAGATGGAATGAAGCAGCACAGCTGCGGAAATCTATG AGAATCAAAGGTATGAAGAAGGAACCAGCTTGCAGTTGGATTGAAGTGAAGAACAAATTG CATGTGTTCATAGCTCATGATAAGTCCCATCCCTGGTACGATAGGATTATTGATGCACTG AATGTTTACTCAGAGCAGATGATTCGTCAAGGATATGTGCCCAATATGGAGGATGTTTTA CAGGACATTGAAGAAGAGCAGAAGAGAGAGGTGTTATGTGGCCATAGTGAGAAACTTGCA ATAGTATTTGGTATTATTAGCACGCCACCTGGAACAACAATACGTGTGATGAAGAACCTC CGAGTTTGTGTTGACTGCCATATAGCAACAAAATTTATTTCAAAGATAGTTGCAAGGGAG ATTGTTGTCCGTGATGGGCAGCCGCCACTCGACGCCTCTGCCATCTACAATTCTTCTCTC CGCCACTTCGAAATCAGTGATTCCAAGTTCCCCTTGCATTCTATAAGCCTGTCTTATGAC AACTTGGCATGGATGTTGGCGCTGGTGGAGATCAGCGCTGATCTTTGGTCAATACGATCG GCACTCCAAGGGACGGAAGAGATTGGCTGCCTTGTTTATTTCCCTTGTGTGATCAAGCTT TTTGTTTTGGAGGAATGA

Peptide Sequence

PEP ID	Os07t0578800-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:23425405:23427883:-1 gene:Os07g0578800 transcript:Os07t0578800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0578800-00)
Sequence	MSLAAVASPHFPPSWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCA GLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAY ESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWN SMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRA RFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLF ERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGR AGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVIL SNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDAL NVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNL RVCVDCHIATKFISKIVAREIVVRDGQPPLDASAIYNSSLRHFEISDSKFPLHSISLSYD NLAWMLALVEISADLWSIRSALQGTEEIGCLVYFPCVIKLFVLEE

Transcript Sequence

Transcript ID	Os07t0578800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:23425405:23427883:-1 gene:Os07g0578800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0578800-00)
Sequence	ATGTCTCTTGCTGCGGTTGCTTCTCCACATTTCCCACCGTCATGGGCCTATCAGATCCGT ATGGCTGCTTCCCAGGGCCAATTTCTCCACGCCATCTCTCTCTTCCTACAAATGCGTGCC TCTGTTGCGCCCCGATCATCTGTTCCGGCCTCCCTCCCTGCTGCACTCAAGTCCTGCGCC GGCCTTGGCCTCTGCACTCTTGCTGCATCTCTCCATGCTCTCGCCATCCGCTCCGGTTCC TTCGCTGACCGCTTTACCGCCAATGCCCTCCTCAACCTCTGCATCAAGCTCCCAGGTTTT CATCACCCCTTTGGGACAAATGGGCCTTCTGGGGAAGGAGGCCTGGAATCAGCTGCATAT GAGAGCATGCGGAAAGTGTTTGATGAAATGCTCGAGAGGGATGCCGTGTCTTGGAACACT TTGATATTGGGATGTGCAGAGCACAAGAGGCACCAAGAAGCTCTGAGCATGGTTAGGGAG ATGTGGAGGGATGGATTTATGCCTGACACGTTTACACTGTCAACTGTGCTGCCAATCTTT GCGGAGTGCGCTGATATCAAGAGAGGCATGGTGGTCCATGGGTATGCTATCAAGAATGGA TTTGACAATGATGTTTTTGTTGGAAGTAGCTTGATTGATATGTATGCTAACTGCACTCAA ATGGATTACTCTATGAAGGTGTTCGACAGCTTCTCAGACTGTGATGCAGTTCTGTGGAAC TCAATGCTTGCAGGTTATGCACAAAATGGGTCAGTTGAGGAGGCTCTTGGAATATTCCGT CGGATGCTGCAAGCTGGAGTGAGGCCCGTGCCTGTGACTTTCTCAAGCCTAATACCTGCC TTTGGCAATTTGTCATTGTTGCGTCTTGGGAAGCAGCTGCATGCCTATTTGATCCGTGCC AGATTTAATGATAACATATTTATATCTAGCTCCCTTATTGACATGTATTGCAAGTGTGGG AATGTTGACATAGCTCGTCGCGTTTTTAATGGGATACAATCACCTGACATCGTATCATGG ACTGCGATGATCATGGGTTATGCATTGCACGGTCCAACAACAGAGGCTTTTGTGCTGTTT GAGAGAATGGAGTTGGGAAATGTGAAGCCTAATCATATAACTTTTCTAGCAGTTTTGACT GCATGTAGTCATGCTGGGTTGGTGGACAATGGATGGAAGTATTTTAACAGTATGTCTAAC CAGTATGGATTTGTTCCATCCCTTGAGCATTGTGCTGCACTTGCAGACACCCTTGGTCGT GCAGGAGATTTAGATGAAGCATATAATTTCATCTCTGAAATGAAAATAAAACCAACTTCA AGCGTCTGGTCCACCTTGTTAAGGGCTTGCAGGGTCCATAAAAACACTGTTTTAGCTGAG GAAGTGGCCAAGAAGATCTTTGAGCTTGAACCTAAAAGCATGGGATCTCATGTAATTTTG TCAAACATGTATTCGGCTTCTGGGAGATGGAATGAAGCAGCACAGCTGCGGAAATCTATG AGAATCAAAGGTATGAAGAAGGAACCAGCTTGCAGTTGGATTGAAGTGAAGAACAAATTG CATGTGTTCATAGCTCATGATAAGTCCCATCCCTGGTACGATAGGATTATTGATGCACTG AATGTTTACTCAGAGCAGATGATTCGTCAAGGATATGTGCCCAATATGGAGGATGTTTTA CAGGACATTGAAGAAGAGCAGAAGAGAGAGGTGTTATGTGGCCATAGTGAGAAACTTGCA ATAGTATTTGGTATTATTAGCACGCCACCTGGAACAACAATACGTGTGATGAAGAACCTC CGAGTTTGTGTTGACTGCCATATAGCAACAAAATTTATTTCAAAGATAGTTGCAAGGGAG ATTGTTGTCCGTGATGGGCAGCCGCCACTCGACGCCTCTGCCATCTACAATTCTTCTCTC CGCCACTTCGAAATCAGTGATTCCAAGTTCCCCTTGCATTCTATAAGCCTGTCTTATGAC AACTTGGCATGGATGTTGGCGCTGGTGGAGATCAGCGCTGATCTTTGGTCAATACGATCG GCACTCCAAGGGACGGAAGAGATTGGCTGCCTTGTTTATTTCCCTTGTGTGATCAAGCTT TTTGTTTTGGAGGAATGA