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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0577900-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:23371551:23373885:-1 gene:Os07g0577900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Target SNARE coiled-coil region domain containing protein. (Os07t0577900-01)
Sequence

ATGGCGAACCCGCTGCACGGCTCGGGTCCGCTTCGATCCAGGAATGCGTCGAGCTCGGAC
GAGATCCAGCTGCGGATCGATCCGGTGCACGGCGATCTTGATGAGGAGATCGATGGGCTG
CACTCGAGGGTTCGCCTACTGAAAGGCGTGGCCCAGGAGATAAATGCTGAAGCCAAGTTC
CAGAATGATTTCCTCAGCCAACTGCAAATGACCCTCATAAAAGCTCAGGCTGGAGTGAAG
CATAACATGCGAAGGATGAACAAGAGCATCATCCAACAGGGCTCGAATCATGTTGTGCAC
GTGGTCCTTTTTGCTCTGTTTTGCTTCTTCGTTGTCTATCTCTTGTCAAAGTTCTCTAGA
AGATAA

Peptide Sequence

PEP ID

Os07t0577900-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:23371551:23373885:-1 gene:Os07g0577900 transcript:Os07t0577900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Target SNARE coiled-coil region domain containing protein. (Os07t0577900-01)
Sequence

MANPLHGSGPLRSRNASSSDEIQLRIDPVHGDLDEEIDGLHSRVRLLKGVAQEINAEAKF
QNDFLSQLQMTLIKAQAGVKHNMRRMNKSIIQQGSNHVVHVVLFALFCFFVVYLLSKFSR
R

Transcript Sequence

Transcript ID

Os07t0577900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:23371551:23373885:-1 gene:Os07g0577900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Target SNARE coiled-coil region domain containing protein. (Os07t0577900-01)
Sequence

CTCTCCTCCATCCTCCCCTCCGGCCTCCACCCGCCGTCGTCCGTCGCCGTTGCGCGCGCG
CCACCCCCTCCCTCCTTCCCGTGCGCCGCCGCCTCGTCGTTCCATCTAAGTCGCGAGGGA
ACGAGCTGAACCCCATCTGCGCTGGTAAGCGCGATGGCGAACCCGCTGCACGGCTCGGGT
CCGCTTCGATCCAGGAATGCGTCGAGCTCGGACGAGATCCAGCTGCGGATCGATCCGGTG
CACGGCGATCTTGATGAGGAGATCGATGGGCTGCACTCGAGGGTTCGCCTACTGAAAGGC
GTGGCCCAGGAGATAAATGCTGAAGCCAAGTTCCAGAATGATTTCCTCAGCCAACTGCAA
ATGACCCTCATAAAAGCTCAGGCTGGAGTGAAGCATAACATGCGAAGGATGAACAAGAGC
ATCATCCAACAGGGCTCGAATCATGTTGTGCACGTGGTCCTTTTTGCTCTGTTTTGCTTC
TTCGTTGTCTATCTCTTGTCAAAGTTCTCTAGAAGATAATAACACTGTTAGACATATGGC
TATAAGATAGTTGAGTTCTGTCAACCTAGTGACCATGAGGGTATACCATTGGTTTTAACT
TGTATACTACATATGGACACATCTCTGAAGTTTATGTAATGGCTTCTGTGATATGGATAT
AATATATCCTGACATAGGTATGTTACTCTATGGATTAATGCATACAAGCTATACTCTTAA
TTCCAGTTTTTCTT