Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0575500-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:23274457:23276634:-1 gene:Os07g0575500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to beta-hexosaminidase. (Os07t0575500-00)
Sequence	ATGTCCACCAATCAGGGGGTGCAGCTCCGATTAGCGGCTCAAGCTAAGGCAGCCATGGCA ACCAAGAACGGTGGTTTTGTTGCGTTGCTGCTGCTGCTGTCGTTCTTGCTGAGCTCGCCG CTGCCGGCGCGATGCGACGCGCCGCTCCCCGTCAATGTCTGGCCCAAGCCGACGTCCATG TCGTGGGCGGAGCCCCACATGGCCGTGCGTGTCTCGAGCTCGTTCCACGTCGTCGCCCCG TCCGGGAACGCGCACCTCCTCTCGGCGGCGCGGCGCTACGCCGCGCTGCTCCTCGCCGAG CGGTACCGGCCCCTCGTGACGCCGGCGGTGAACGTCACCGCGGGCGGCGCCGGCGCCGGC GCGGCGGGAAGGGGAGCCGAGCTGGGGTACCTGACGCTCGCCGTGTCCGACCTGCACGCG CCGCTGCAGCACGGCGTGGACGAGTCGTACGCGCTGGAGATCCTCCCCGCCGGCGCGGCG GCCACGGTGACCGCGGCCACGGCGTGGGGCGCCATGCGCGGCCTCGAGACGTTCTCGCAG CTGGCGTGGTGGTGCGGGCGGGAGCGGGCGGTGCTGGTGGCCGCCGGCGTGCGCGTCGAG GACCGGCCGCTGTACCCGCACCGCGGGCTGATGCTGGACACCGGGAGGACGTACTTCCCC GTCGCCGACATCCTCCGGACGATCGACGCCATGGCGGCGAACAAGATGAACGTGTTCCAC TGGCACATCACGGACTCCCAGTCGTTCCCCCTCGAGCTCCCCTCCGAGCCGGCGCTCGCC GAGAAGGGCTCCTACGGCGACGGCATGCGCTACACCGTCGACGACGTTAAGCTCATTGTC GACTTCGCCATGAACCGCGGCGTCCGCGTCGTGCCAGAGATAGACACACCCGGCCACACG GCGTCGTGGGCCGGAGCTTACCCCGAGCTGGTGTCCTGCGCCGGCGAGTTCTGGCTGCCC GACGCGTCTGACTGGCCCAGCCGACTTGCCGCCGAGCCGGGCGCCGGCCAGCTCAACCCG CTGGAGCCCAAGACGTACCAGGTGATGTCCAACGTCATCAACGACGTCACCTCCCTCTTC CCGGACGGCTTCTACCACGCCGGCGCCGACGAGGTCACGCCGGGGTGCTGGAACGCCGAC CCGTCCATCCAGCGCTACCTCGCCCGCGGCGGCACGCTCAGCCGCCTCCTCGAGAAGTTC GTCGGCGCGGCGCACCCGCTGATCGTGTCCCGGAACCGGACGGCGGTGTACTGGGAGGAC GTGCTGCTGGACCAGGCGGTGAACGTGACCGCGTCGGCGATCCCGCCGGAGACGACGATC CTGCAGACGTGGAACAACGGCGGCAACAACACGAGGCTGATCGTGCGCGCCGGGTACCGG GCCATCGTCTCGTCGGCGTCGTTCTACTACCTCGACTGCGGCCACGGCGACTTCGCCGGC AACGACTCCGCCTACGACGACCCGAGGAGCGACTACGGCACCAGCGGCGGGTCGTGGTGC GGACCGTACAAGACGTGGCAGCGGGTGTACGACTACGACGTCGCGGGCGGGCTCACCGCC GAGGAGGCCAGGCTGGTGGTCGGCGGGGAGGTGGCGATGTGGACGGAGCAGGTGGACGCG GCGGTGCTCGACGGCAGGGTGTGGCCGAGGGCGTCGGCGATGGCGGAGGCGCTGTGGTCG GGCAACCGCGACGCCACCGGCCGGAAGCGCTACGCCGAGGCGACCGACCGGCTCACCGAC TGGCGGCACCGGATGGTGGGGCGAGGGGTCCGCGCGGAGCCCATCCAGCCGCTCTGGTGC AGGAACCGCCCGGGAATGTGTAACTTGGTCCGGTGA

Peptide Sequence

PEP ID	Os07t0575500-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:23274457:23276634:-1 gene:Os07g0575500 transcript:Os07t0575500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to beta-hexosaminidase. (Os07t0575500-00)
Sequence	MSTNQGVQLRLAAQAKAAMATKNGGFVALLLLLSFLLSSPLPARCDAPLPVNVWPKPTSM SWAEPHMAVRVSSSFHVVAPSGNAHLLSAARRYAALLLAERYRPLVTPAVNVTAGGAGAG AAGRGAELGYLTLAVSDLHAPLQHGVDESYALEILPAGAAATVTAATAWGAMRGLETFSQ LAWWCGRERAVLVAAGVRVEDRPLYPHRGLMLDTGRTYFPVADILRTIDAMAANKMNVFH WHITDSQSFPLELPSEPALAEKGSYGDGMRYTVDDVKLIVDFAMNRGVRVVPEIDTPGHT ASWAGAYPELVSCAGEFWLPDASDWPSRLAAEPGAGQLNPLEPKTYQVMSNVINDVTSLF PDGFYHAGADEVTPGCWNADPSIQRYLARGGTLSRLLEKFVGAAHPLIVSRNRTAVYWED VLLDQAVNVTASAIPPETTILQTWNNGGNNTRLIVRAGYRAIVSSASFYYLDCGHGDFAG NDSAYDDPRSDYGTSGGSWCGPYKTWQRVYDYDVAGGLTAEEARLVVGGEVAMWTEQVDA AVLDGRVWPRASAMAEALWSGNRDATGRKRYAEATDRLTDWRHRMVGRGVRAEPIQPLWC RNRPGMCNLVR

Transcript Sequence

Transcript ID	Os07t0575500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:23274457:23276634:-1 gene:Os07g0575500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to beta-hexosaminidase. (Os07t0575500-00)
Sequence	ATGTCCACCAATCAGGGGGTGCAGCTCCGATTAGCGGCTCAAGCTAAGGCAGCCATGGCA ACCAAGAACGGTGGTTTTGTTGCGTTGCTGCTGCTGCTGTCGTTCTTGCTGAGCTCGCCG CTGCCGGCGCGATGCGACGCGCCGCTCCCCGTCAATGTCTGGCCCAAGCCGACGTCCATG TCGTGGGCGGAGCCCCACATGGCCGTGCGTGTCTCGAGCTCGTTCCACGTCGTCGCCCCG TCCGGGAACGCGCACCTCCTCTCGGCGGCGCGGCGCTACGCCGCGCTGCTCCTCGCCGAG CGGTACCGGCCCCTCGTGACGCCGGCGGTGAACGTCACCGCGGGCGGCGCCGGCGCCGGC GCGGCGGGAAGGGGAGCCGAGCTGGGGTACCTGACGCTCGCCGTGTCCGACCTGCACGCG CCGCTGCAGCACGGCGTGGACGAGTCGTACGCGCTGGAGATCCTCCCCGCCGGCGCGGCG GCCACGGTGACCGCGGCCACGGCGTGGGGCGCCATGCGCGGCCTCGAGACGTTCTCGCAG CTGGCGTGGTGGTGCGGGCGGGAGCGGGCGGTGCTGGTGGCCGCCGGCGTGCGCGTCGAG GACCGGCCGCTGTACCCGCACCGCGGGCTGATGCTGGACACCGGGAGGACGTACTTCCCC GTCGCCGACATCCTCCGGACGATCGACGCCATGGCGGCGAACAAGATGAACGTGTTCCAC TGGCACATCACGGACTCCCAGTCGTTCCCCCTCGAGCTCCCCTCCGAGCCGGCGCTCGCC GAGAAGGGCTCCTACGGCGACGGCATGCGCTACACCGTCGACGACGTTAAGCTCATTGTC GACTTCGCCATGAACCGCGGCGTCCGCGTCGTGCCAGAGATAGACACACCCGGCCACACG GCGTCGTGGGCCGGAGCTTACCCCGAGCTGGTGTCCTGCGCCGGCGAGTTCTGGCTGCCC GACGCGTCTGACTGGCCCAGCCGACTTGCCGCCGAGCCGGGCGCCGGCCAGCTCAACCCG CTGGAGCCCAAGACGTACCAGGTGATGTCCAACGTCATCAACGACGTCACCTCCCTCTTC CCGGACGGCTTCTACCACGCCGGCGCCGACGAGGTCACGCCGGGGTGCTGGAACGCCGAC CCGTCCATCCAGCGCTACCTCGCCCGCGGCGGCACGCTCAGCCGCCTCCTCGAGAAGTTC GTCGGCGCGGCGCACCCGCTGATCGTGTCCCGGAACCGGACGGCGGTGTACTGGGAGGAC GTGCTGCTGGACCAGGCGGTGAACGTGACCGCGTCGGCGATCCCGCCGGAGACGACGATC CTGCAGACGTGGAACAACGGCGGCAACAACACGAGGCTGATCGTGCGCGCCGGGTACCGG GCCATCGTCTCGTCGGCGTCGTTCTACTACCTCGACTGCGGCCACGGCGACTTCGCCGGC AACGACTCCGCCTACGACGACCCGAGGAGCGACTACGGCACCAGCGGCGGGTCGTGGTGC GGACCGTACAAGACGTGGCAGCGGGTGTACGACTACGACGTCGCGGGCGGGCTCACCGCC GAGGAGGCCAGGCTGGTGGTCGGCGGGGAGGTGGCGATGTGGACGGAGCAGGTGGACGCG GCGGTGCTCGACGGCAGGGTGTGGCCGAGGGCGTCGGCGATGGCGGAGGCGCTGTGGTCG GGCAACCGCGACGCCACCGGCCGGAAGCGCTACGCCGAGGCGACCGACCGGCTCACCGAC TGGCGGCACCGGATGGTGGGGCGAGGGGTCCGCGCGGAGCCCATCCAGCCGCTCTGGTGC AGGAACCGCCCGGGAATGTGTAACTTGGTCCGGTGA