Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0575000-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:23251004:23252291:-1 gene:Os07g0575000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 6 description:Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0575000-00)
Sequence

ATGGAGCTCAACTTCCAAGTGCAACCTCCAGTGTTCCAGCTGCAAGACTACTGCTACTAC
TACAGCCAAGAGGTGGCGGCGGCGGCGTCGCCGGCGGCGAAGCCGACGAAGCCGCGGGGG
AGGAAGAAGGGCAGCACGAGCCACAGCAAGTTCGTCGGCGTCCGGCAGCGGCCGTCGGGG
CGGTGGGTGGCGGAGATCAAGGACACGACGCAGAAGATCCGCATGTGGCTCGGCACCTTC
GAGACCGCCGACGCCGCCGCGCGCGCCTACGACGAGGCCGCGCGCCTCCTCCGCGGCGCC
GAGGCGCGCACCAACTTCGCGCCACGCATCTCGCCGGACTGCCCGCTCGCCGTCCGCATC
CGCGGAATCCTCCACCACAAGAAGCTCAAGAAGGCCAGGTCCGCCGCCGCGGCCACGGCC
GGCTCCCCCGGCGCCGCATCCAAGAAGAGGTCCACCACGGCGGCGGCGGCGGCGGCCACT
CCGACGATCACAACCACAAGCAATAGCAATAGCGATGGTGCGGGTAGTGCTTGTGGTGGC
TCGAGCAGCAGCAGCAGCAGCACGGACAGCTGCGACGGCGCCGTGAAGCAAGGCGGCGGC
GGCGGCGGCGCACCAACGGACGCCAGCGAGGTGTACCGGCCGGACTTCGTCCACGCGGGC
GCCGAGGAGTTCGATTCTTGGATGTTCGACACGGCGTTCGGCCCGTTCCCAGAGCTGGAC
AGCTTCGCCGCCGTCGACGCCGTCACGCCACCGCCAGCAACGGCGTCGCCGGAGGAGTCA
AGCGCCGGCACGCCGCCGGTCGAGATGGCGGAGTTCGAGCGGATAAAGGTGGAGCGGCGG
ATCTCGGCGTCCCTGTACGCCATGAACGGCCTGCAGGAGTACTTCGACAAGGTGTTCGAC
GCGTCCGCCTGCGACCCGTTCTGGGATTTCTCGCCACTCCGGCGTATGTGCTTCCTTCGC
CGACTCGCCGTCGTCGTTCTTGCTCTTTTGTTGCCTCCTGGATCAGCTGTACCCATGCAT
GTCCATGTAAGCTCAATTGGTTTTTTGCTGCAGCCAGGCAGTGCAGTTTCAAAGAGGAAG
ATGATTCTACTTGTTTCGAGTTGGACAATTGGTTATTTTTTCTGTGCAATTTGCTTTAGT
TTTTCACTTCAGGATAGATTAGAGATTCTATGCAGTAAGTTCAAGTCGTTTGTTATGTAT
GTAAAACCAAATTCAGATGTAGAGTAG

Peptide Sequence

PEP ID

Os07t0575000-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:23251004:23252291:-1 gene:Os07g0575000 transcript:Os07t0575000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 6 description:Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0575000-00)
Sequence

MELNFQVQPPVFQLQDYCYYYSQEVAAAASPAAKPTKPRGRKKGSTSHSKFVGVRQRPSG
RWVAEIKDTTQKIRMWLGTFETADAAARAYDEAARLLRGAEARTNFAPRISPDCPLAVRI
RGILHHKKLKKARSAAAATAGSPGAASKKRSTTAAAAAATPTITTTSNSNSDGAGSACGG
SSSSSSSTDSCDGAVKQGGGGGGAPTDASEVYRPDFVHAGAEEFDSWMFDTAFGPFPELD
SFAAVDAVTPPPATASPEESSAGTPPVEMAEFERIKVERRISASLYAMNGLQEYFDKVFD
ASACDPFWDFSPLRRMCFLRRLAVVVLALLLPPGSAVPMHVHVSSIGFLLQPGSAVSKRK
MILLVSSWTIGYFFCAICFSFSLQDRLEILCSKFKSFVMYVKPNSDVE

Transcript Sequence

Transcript ID

Os07t0575000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:23251004:23252291:-1 gene:Os07g0575000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 6 description:Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0575000-00)
Sequence

CAAACACATGGAGCTCAACTTCCAAGTGCAACCTCCAGTGTTCCAGCTGCAAGACTACTG
CTACTACTACAGCCAAGAGGTGGCGGCGGCGGCGTCGCCGGCGGCGAAGCCGACGAAGCC
GCGGGGGAGGAAGAAGGGCAGCACGAGCCACAGCAAGTTCGTCGGCGTCCGGCAGCGGCC
GTCGGGGCGGTGGGTGGCGGAGATCAAGGACACGACGCAGAAGATCCGCATGTGGCTCGG
CACCTTCGAGACCGCCGACGCCGCCGCGCGCGCCTACGACGAGGCCGCGCGCCTCCTCCG
CGGCGCCGAGGCGCGCACCAACTTCGCGCCACGCATCTCGCCGGACTGCCCGCTCGCCGT
CCGCATCCGCGGAATCCTCCACCACAAGAAGCTCAAGAAGGCCAGGTCCGCCGCCGCGGC
CACGGCCGGCTCCCCCGGCGCCGCATCCAAGAAGAGGTCCACCACGGCGGCGGCGGCGGC
GGCCACTCCGACGATCACAACCACAAGCAATAGCAATAGCGATGGTGCGGGTAGTGCTTG
TGGTGGCTCGAGCAGCAGCAGCAGCAGCACGGACAGCTGCGACGGCGCCGTGAAGCAAGG
CGGCGGCGGCGGCGGCGCACCAACGGACGCCAGCGAGGTGTACCGGCCGGACTTCGTCCA
CGCGGGCGCCGAGGAGTTCGATTCTTGGATGTTCGACACGGCGTTCGGCCCGTTCCCAGA
GCTGGACAGCTTCGCCGCCGTCGACGCCGTCACGCCACCGCCAGCAACGGCGTCGCCGGA
GGAGTCAAGCGCCGGCACGCCGCCGGTCGAGATGGCGGAGTTCGAGCGGATAAAGGTGGA
GCGGCGGATCTCGGCGTCCCTGTACGCCATGAACGGCCTGCAGGAGTACTTCGACAAGGT
GTTCGACGCGTCCGCCTGCGACCCGTTCTGGGATTTCTCGCCACTCCGGCGTATGTGCTT
CCTTCGCCGACTCGCCGTCGTCGTTCTTGCTCTTTTGTTGCCTCCTGGATCAGCTGTACC
CATGCATGTCCATGTAAGCTCAATTGGTTTTTTGCTGCAGCCAGGCAGTGCAGTTTCAAA
GAGGAAGATGATTCTACTTGTTTCGAGTTGGACAATTGGTTATTTTTTCTGTGCAATTTG
CTTTAGTTTTTCACTTCAGGATAGATTAGAGATTCTATGCAGTAAGTTCAAGTCGTTTGT
TATGTATGTAAAACCAAATTCAGATGTAGAGTAG