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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0574500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:23227384:23227979:1 gene:Os07g0574500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os07t0574500-01)
Sequence

ATGTTCGGCCGGTCTGGCATCACGGCGGCGGTGAAGGTGGAGGAGGAGGACGACGGGAAG
ACGCCGGCGGCCAAGCGTGCCGGAGAGTACGTCACGCTGAAGGTGCAGGACACCGACGGC
CGCGCCGTCTACCGCACCATGCGGTGGACGGAGCAGCTGCAGGGCCTGATGGACTTCTAC
TACGACCGCGCGCATGGCCGGGTGCAGCGCGGCACGGGTCGGTTCCTCTACGACGGCCGC
CGGCTGAGCGGCTGGCAGACGCCGGCGGAGCTCGACATGGAGGACGGTGATGAGGTCGAC
TTCTTCGAGGAGCTGATCGGTGGCGCCGCTTGA

Peptide Sequence

PEP ID

Os07t0574500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:23227384:23227979:1 gene:Os07g0574500 transcript:Os07t0574500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os07t0574500-01)
Sequence

MFGRSGITAAVKVEEEDDGKTPAAKRAGEYVTLKVQDTDGRAVYRTMRWTEQLQGLMDFY
YDRAHGRVQRGTGRFLYDGRRLSGWQTPAELDMEDGDEVDFFEELIGGAA

Transcript Sequence

Transcript ID

Os07t0574500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:23227384:23227979:1 gene:Os07g0574500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin domain containing protein. (Os07t0574500-01)
Sequence

AACAGCAACACAACTACGCAAGTACACCTAACCGCAGATTAGAGCTAGCTCACCGGAGAC
GAGATGTTCGGCCGGTCTGGCATCACGGCGGCGGTGAAGGTGGAGGAGGAGGACGACGGG
AAGACGCCGGCGGCCAAGCGTGCCGGAGAGTACGTCACGCTGAAGGTGCAGGACACCGAC
GGCCGCGCCGTCTACCGCACCATGCGGTGGACGGAGCAGCTGCAGGGCCTGATGGACTTC
TACTACGACCGCGCGCATGGCCGGGTGCAGCGCGGCACGGGTCGGTTCCTCTACGACGGC
CGCCGGCTGAGCGGCTGGCAGACGCCGGCGGAGCTCGACATGGAGGACGGTGATGAGGTC
GACTTCTTCGAGGAGCTGATCGGTGGCGCCGCTTGATCCGGATGGGCTCCTGCTCCATCG
TCGATGATCGCGTCGTAGCTTGTTCCTGGCAGTTGTGGACTTGTAATTGTGTACTGGTTG
TGGAGAACCAGAGTACACTAGGTTTGGATGATAAGTGTTTTTTCATTTTGGTGTTAAGCA
GATGCGACGCTTGTAATTTTTCCAGTACTTCTGTCTCATCCAAGTAATCTCGAACT