Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0573300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:23169765:23173649:1 gene:Os07g0573300 gene_biotype:protein_coding transcript_biotype:protein_coding description:FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). Splice isoform p235S. (Os07t0573300-01);Similar to FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). (Os07t0573300-02)
Sequence	ATGCAGCACGGAGACTACGCCTCCTCGGCCCCCCCGGCTGCGGGCCACTACTACCCGCAC CAGTTCGCGCCGAATCCGCCTCCGCACCCGGCCTCCTCCGCCGCCGACGCCGCGCCGCCG ACGATCCCGGCGAGCTACGCCTCCGCGCCGCCCTACTCGGTGGGAGGGTACTCCGATCAG CCGCCGTCGGCCCCGTCCTACGCGCCGCCGCCCCAGTACGCCGGGTACGCGCCGCCCTAC AACAATCCCAACCCCGCGCCCTACCCACCGGAGTCGTCCCCGGCGCCGGCGCCGTACTAC AGCTACCCGCCGACGGCGGCGGGGGTGGCCACGCAGCATGCTCCGGCGGCGGAGCCCAGC CCCGCGCCGCTGCCCTACGACGCCCCGTACTACGGAGGCTACCAGCCGCCTCCTACCGCG GGGTACGGCGACGATGATTACCTGAACGAGGGCGCCTACGCGTATAGCGGCGACGGCGGC TCCGAGCCGTACGGGGCGCGCGGCACGGCGCCGACGCGGTCGGGTGCCGCGATGTTTGAT GACTACGGCCGGTCGATTGGGCCCTCGTCGGGAGGGGCGGACCAGTGGCCCACCGGTGGC GGCGGCGGTGTGGGTGGGAGCTTTGGGAAAATTGCGAGGGCTGTTCCAAAAGCAGAGTCT CATGAGGATGCTAACGGTGGTGCGCAGAAGTTTCGGGTTAAACTGCTGCCTGAGGGTGCC GGGAGCCCTACCGATGTGCTTTGTCAGATTGGTCTGGATGGAATTCGCATGCTTGATCCC AGCACAAGCAGGACACTAAGGATTTATCCCCTTGATACACTGACAAGATGGGATGTTTTA GATTCAACCGTATTTGCATTTTGGGCGAAGACTCCAGTTGATTTTGAAGCAAAGCGAATA AGGTTGAAGTCAAACAGCTATACCTCCAATACTTTGCTTGACACTGTGACTGCAGCAACA GTGCAGTTTAAGGAGATTGGTGGAGATGCAAGAGGCAGAGGAACTGTAGACAGTAGCAAA CCCATGTCACAATCAAATGAGAAGAAGAAAGGTTTTGATTGGATGTTTGCAAAACCTGTT GACGAAGTGAAAGACCATTGGGTTCCAGATGAGGCTGCGAAGAAGTGCTACTCATGTGCT GTTGATTTTAGTCCTTTTAACCGCAGGCATCATTGTAGGAACTGTGGTGAAATATTCTGT GACAAATGCAGTCAAGGAAGAACTGCTCTGACTGCTGAAGATAATGCCCCGCTTGTCCGA GTTTGTGATAGATGCATGGCAGAAGTCTCTCAAAGGCTTAGCATAGCACAGGAAGCTGCC AACAGGTCTGCCACAGTGCAAAGTCATGAAGATCTTGCAAGAAAACTTAAGGAGGAAATG GAGAGAAATCGCAAGTCCTCGGGTTCTGCATCTGGAGGTTCATCTGGGACCAGAATGAGG GAAGTTGCATGTCCTACTTGCACTGTCCATCTTCAGGTTCAGGTTCCAACCTCTGGCTCA GAAACAGTGGAATGTGGGGTATGCCAGCATGCTTTCCGTGTCAGCGCCAATTGA

Peptide Sequence

PEP ID	Os07t0573300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:23169765:23173649:1 gene:Os07g0573300 transcript:Os07t0573300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). Splice isoform p235S. (Os07t0573300-01);Similar to FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). (Os07t0573300-02)
Sequence	MQHGDYASSAPPAAGHYYPHQFAPNPPPHPASSAADAAPPTIPASYASAPPYSVGGYSDQ PPSAPSYAPPPQYAGYAPPYNNPNPAPYPPESSPAPAPYYSYPPTAAGVATQHAPAAEPS PAPLPYDAPYYGGYQPPPTAGYGDDDYLNEGAYAYSGDGGSEPYGARGTAPTRSGAAMFD DYGRSIGPSSGGADQWPTGGGGGVGGSFGKIARAVPKAESHEDANGGAQKFRVKLLPEGA GSPTDVLCQIGLDGIRMLDPSTSRTLRIYPLDTLTRWDVLDSTVFAFWAKTPVDFEAKRI RLKSNSYTSNTLLDTVTAATVQFKEIGGDARGRGTVDSSKPMSQSNEKKKGFDWMFAKPV DEVKDHWVPDEAAKKCYSCAVDFSPFNRRHHCRNCGEIFCDKCSQGRTALTAEDNAPLVR VCDRCMAEVSQRLSIAQEAANRSATVQSHEDLARKLKEEMERNRKSSGSASGGSSGTRMR EVACPTCTVHLQVQVPTSGSETVECGVCQHAFRVSAN

Transcript Sequence

Transcript ID	Os07t0573300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:23169765:23173649:1 gene:Os07g0573300 gene_biotype:protein_coding transcript_biotype:protein_coding description:FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). Splice isoform p235S. (Os07t0573300-01);Similar to FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5- kinase) (PIKfyve) (p235). (Os07t0573300-02)
Sequence	GTCGATCTCCCTCACGAAGCAACCCCAGCCTTCTTTACCTTTCCCGGGCCGTGTCGCCCA CGCGATTCCCTTCCCTCCAATCGAATCACGTCGCCGTCCTCCTCCGCCTCCGCCGCCGCC AACCTCGTCGGCGCCGCCCTCGGATCCACGCCGCGCGATGCAGCACGGAGACTACGCCTC CTCGGCCCCCCCGGCTGCGGGCCACTACTACCCGCACCAGTTCGCGCCGAATCCGCCTCC GCACCCGGCCTCCTCCGCCGCCGACGCCGCGCCGCCGACGATCCCGGCGAGCTACGCCTC CGCGCCGCCCTACTCGGTGGGAGGGTACTCCGATCAGCCGCCGTCGGCCCCGTCCTACGC GCCGCCGCCCCAGTACGCCGGGTACGCGCCGCCCTACAACAATCCCAACCCCGCGCCCTA CCCACCGGAGTCGTCCCCGGCGCCGGCGCCGTACTACAGCTACCCGCCGACGGCGGCGGG GGTGGCCACGCAGCATGCTCCGGCGGCGGAGCCCAGCCCCGCGCCGCTGCCCTACGACGC CCCGTACTACGGAGGCTACCAGCCGCCTCCTACCGCGGGGTACGGCGACGATGATTACCT GAACGAGGGCGCCTACGCGTATAGCGGCGACGGCGGCTCCGAGCCGTACGGGGCGCGCGG CACGGCGCCGACGCGGTCGGGTGCCGCGATGTTTGATGACTACGGCCGGTCGATTGGGCC CTCGTCGGGAGGGGCGGACCAGTGGCCCACCGGTGGCGGCGGCGGTGTGGGTGGGAGCTT TGGGAAAATTGCGAGGGCTGTTCCAAAAGCAGAGTCTCATGAGGATGCTAACGGTGGTGC GCAGAAGTTTCGGGTTAAACTGCTGCCTGAGGGTGCCGGGAGCCCTACCGATGTGCTTTG TCAGATTGGTCTGGATGGAATTCGCATGCTTGATCCCAGCACAAGCAGGACACTAAGGAT TTATCCCCTTGATACACTGACAAGATGGGATGTTTTAGATTCAACCGTATTTGCATTTTG GGCGAAGACTCCAGTTGATTTTGAAGCAAAGCGAATAAGGTTGAAGTCAAACAGCTATAC CTCCAATACTTTGCTTGACACTGTGACTGCAGCAACAGTGCAGTTTAAGGAGATTGGTGG AGATGCAAGAGGCAGAGGAACTGTAGACAGTAGCAAACCCATGTCACAATCAAATGAGAA GAAGAAAGGTTTTGATTGGATGTTTGCAAAACCTGTTGACGAAGTGAAAGACCATTGGGT TCCAGATGAGGCTGCGAAGAAGTGCTACTCATGTGCTGTTGATTTTAGTCCTTTTAACCG CAGGCATCATTGTAGGAACTGTGGTGAAATATTCTGTGACAAATGCAGTCAAGGAAGAAC TGCTCTGACTGCTGAAGATAATGCCCCGCTTGTCCGAGTTTGTGATAGATGCATGGCAGA AGTCTCTCAAAGGCTTAGCATAGCACAGGAAGCTGCCAACAGGTCTGCCACAGTGCAAAG TCATGAAGATCTTGCAAGAAAACTTAAGGAGGAAATGGAGAGAAATCGCAAGTCCTCGGG TTCTGCATCTGGAGGTTCATCTGGGACCAGAATGAGGGAAGTTGCATGTCCTACTTGCAC TGTCCATCTTCAGGTTCAGGTTCCAACCTCTGGCTCAGAAACAGTGGAATGTGGGGTATG CCAGCATGCTTTCCGTGTCAGCGCCAATTGATAAACCGGGAGACAGAGCATGTCTATAGC AATTATTCTGTTTATAACTCACTTATTTTGCTGTTCCATACATAATAAGCGTGTGTGCAG CCTGTAGATATTTCCTGGTTGTGTTGGTGACCATGACAGGATATACTAGGTTTTTCTTGT ACATGGGTTAATCCTAAAATATATGCTCTAATACTGCTGAAATTGAAACATGCTTGGATG TCTCTGGAGAATATCAAAGAAACATTCGTTTC