Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0571600-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:23076409:23078827:-1 gene:Os07g0571600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone isomerase domain containing protein. (Os07t0571600-00)
Sequence	ATGGTCTCCCTCCGCTTCCCCGCCGCCACCTTCCCGCGCCTCCCCCCACCCCGGCCTCCC AGCCGCCCGGCCTTCGCCGCCGCACTCGCCGCGGCGGCCGCGGCAGCAGCGGCCGCCGCC GCAAGCCTCACCCTCACCGCCAAATCCGCCGGCCGGCCGCCGCTCCCGCACCCCGCTCCT CTCTGGGCCTCCATCTCCCTGGCCGACGGCGCCGCATTCCCCGCCGAGACGTCCGGCGGG CGCCGCCTCCTCGGCGTCGGCCTCCGCAGGACCACCATCCTCGGCCTCAAGTCCATCGAC GTCTACGCGTTTGGTGTGTATGCGGATGACCACGATCTGAGACAGCTGAGGGAGAAGTAC CAGAAGCTCCCTGTCTCTCAACTGAAGGAGAACGCCGAGCTGATCAACGATGCGTTGGAG CGTGACATACGGATGACGGTCAGGCTCCAGATTGTGTATGGGAGGTTGAGCATTCGATCC GTGCGAAGCGCGTTCGAGAAGAGCGTGGGAAGCAGGCTGCTGAAGTTTGGGGGATCAGAC ACTCATGAGTTGCTTCAGAGTTTCGTTTCACTTTTCAAGGATGAATACAAATTACCAAAG GGGTCCGTGATTGAGCTCTCAAGGGAGTCGAGCCATGTGCTTAAAATAAGTATTGAAGGA GAAGAATTGGGGAGCATACAGAGCAAGCTTTTGTGCAAGTCTATTTTAGATCTTTACATT GGAGACGATCCATTTGACAAAAATGCAAAAGAAAGCGTCCAAGAAAACATGGCTTCTATT CTTAAGAACTGA

Peptide Sequence

PEP ID	Os07t0571600-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:23076409:23078827:-1 gene:Os07g0571600 transcript:Os07t0571600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone isomerase domain containing protein. (Os07t0571600-00)
Sequence	MVSLRFPAATFPRLPPPRPPSRPAFAAALAAAAAAAAAAAASLTLTAKSAGRPPLPHPAP LWASISLADGAAFPAETSGGRRLLGVGLRRTTILGLKSIDVYAFGVYADDHDLRQLREKY QKLPVSQLKENAELINDALERDIRMTVRLQIVYGRLSIRSVRSAFEKSVGSRLLKFGGSD THELLQSFVSLFKDEYKLPKGSVIELSRESSHVLKISIEGEELGSIQSKLLCKSILDLYI GDDPFDKNAKESVQENMASILKN

Transcript Sequence

Transcript ID	Os07t0571600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:23076409:23078827:-1 gene:Os07g0571600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone isomerase domain containing protein. (Os07t0571600-00)
Sequence	CACTAGAAGAAGCCAGGAAAGTTTCTTTCAGTACACCAGCGCTGCCACGGTGCCACCGCC GCCGGCTCACCCGCCACGCGCAACCGCCCGCCGCCGCCTCCGTCTCCAGCCGCCATGGTC TCCCTCCGCTTCCCCGCCGCCACCTTCCCGCGCCTCCCCCCACCCCGGCCTCCCAGCCGC CCGGCCTTCGCCGCCGCACTCGCCGCGGCGGCCGCGGCAGCAGCGGCCGCCGCCGCAAGC CTCACCCTCACCGCCAAATCCGCCGGCCGGCCGCCGCTCCCGCACCCCGCTCCTCTCTGG GCCTCCATCTCCCTGGCCGACGGCGCCGCATTCCCCGCCGAGACGTCCGGCGGGCGCCGC CTCCTCGGCGTCGGCCTCCGCAGGACCACCATCCTCGGCCTCAAGTCCATCGACGTCTAC GCGTTTGGTGTGTATGCGGATGACCACGATCTGAGACAGCTGAGGGAGAAGTACCAGAAG CTCCCTGTCTCTCAACTGAAGGAGAACGCCGAGCTGATCAACGATGCGTTGGAGCGTGAC ATACGGATGACGGTCAGGCTCCAGATTGTGTATGGGAGGTTGAGCATTCGATCCGTGCGA AGCGCGTTCGAGAAGAGCGTGGGAAGCAGGCTGCTGAAGTTTGGGGGATCAGACACTCAT GAGTTGCTTCAGAGTTTCGTTTCACTTTTCAAGGATGAATACAAATTACCAAAGGGGTCC GTGATTGAGCTCTCAAGGGAGTCGAGCCATGTGCTTAAAATAAGTATTGAAGGAGAAGAA TTGGGGAGCATACAGAGCAAGCTTTTGTGCAAGTCTATTTTAGATCTTTACATTGGAGAC GATCCATTTGACAAAAATGCAAAAGAAAGCGTCCAAGAAAACATGGCTTCTATTCTTAAG AACTGAAAGGGAGGCGGGTTAAATGGCAGATATCATGTTTTGAAGAGCTCGCCGTTTTAT TTCTGGTAGTTCTGACTTATGAGAGCACTCTTATGTCTGCTCAAGTATATTCTTCGCAGC CTTTCTTATCTGCGTACTAATTTTACTCTTCTAGCCTTGAACTCTCTCTTGAAACGGAAT GAACGGAGTAACCTT