Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0569800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:22935622:22937578:1 gene:Os07g0569800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os07t0569800-01)
Sequence

TCAGACAAGGCCAAGTACGCACCCAGCGACGGGCTTGCCTTCTTCCTGTCACCCTATCCG
TCAAAGATGTCTCCACTCGACGGCGGTGGATTGCTCGGCGTCTTCACCAACAGCACTGGC
ATGAATCCGTCCGCCGCCGCCCCGATCGTCGCGGTGGAGTTCGACACGTTCCAAAATGAG
TGGGACCAGAGCAGCGACCACATCGGCATCGACGTCAACTCCATCAACTCGACCGCGGTG
AAGTTGCTGTCTGACCGCAGCCTCTCCAACGTCACCGAGCCGATGGTTGCGTCGGTGAGC
TACAACAACAGCACAAGGATGCTGGCCGTCATGCTGCAGATGGCCCCCCAAGATGGCGGC
AAGAGGTACGAGCTCAACAGCACGGTTGACCTCAAGAGCTTGCTCCCCGCGCAGGTGGCC
ATCGGATTCTCGGCGGCGAGCGGGTGGTCCGAGGAGCGGCACCAAGTACTCACCTGGTCT
TTCAATTCGACATTGGTGGCGTCTGAAGAACGGAGAGAAAACGCAACGCGAGGTAGGCCG
GCCGCTGCGGTGCTTGCAGGTGTCGTTGTAGCATCCGTCGTCGTCGTCGGGGCCTCGATC
TGTTTGTTTGTAATGATCAGGCGGCGTAGGATATCTCGCCGGCGGACGAGAGAAGAGTAC
GAGATGGGCGGCTCCGACGACTTCGACATGAACGATGAGTTCGAGCAAGGCACCGGTCCG
AGGCGATTTCTGTACAGCCAACTGGCCACCGCGACGAACGACTTCTCCGAGGACGGGAAG
CTCGGGGAGGGTGGCTTCGGGTCGGTGTACAGGGGCGTCTTGAGCGAACCGGCCGGCGTC
CACGTCGCCGTCAAGAGGATCTCCAAGACCTCCAAGCAGGGGAGGAAGGAGTACGCCTCC
GAGGTGAGCATCATCAGCCGCCTCCGGCACCGGAACCTGGTGCAGCTCGTCGGCTGGTGC
CACGGCCGCGGCGACTTCCTCCTCGTCTACGAGCTGGTGCCCAACGGTAGCCTCGACGCG
CACCTCTACGGCGGCGGCGCGACGCTGCCGTGGCCGACCAGGTACGAGATCGCGCTCGGG
CTCGGCTCGGCGCTGCTCTACCTGCACTCCGGCTACGAGAAGTGCGTGGTGCACAGGGAC
ATCAAGCCCAGCAACATCATGCTCGACTCCGCCTTCGCCGCCAAGCTCGGCGACTTCGGG
CTGGCGAAGCTCGTCGACCACGGCGACGCCTCGCAGACGACGGCGGTCCTGGCGGGGACG
ATGGGGTACATGGACCCGGAGTACGCGGCCTCCGGCAAGGCGAGCACCGCGTCCGACGTC
TACAGCTTCGGCATCGTGCTGCTGGAGATGTGCTGCGGGAGGAGGCCCGTGCTGCTCCAA
GAACAATCCATCAGGTCCCGCCTCCTCGAGTGGGTCTGGGACCTCCACGGCCGCGGCGCC
ATCCTCGAGGCGGCCGACGAGCGGCTGCGCGGCGGCGAGCTCGAGCTCGACGCGAAGCAG
GTGGAGTGCGTGATGGTCGTGGGGCTCTGGTGCGCGCACCCGGACCGCGGCGTGCGGCCG
TCCATCAAGCAGGCGCTCGCCGCGCTCCAGTTCGAGGCTCCGCTGCCGGCTCTTCCTCCG
ACGATGCCCGTGCCGACGTACTCCTCCTTGCCGAGCCTTGCATTGTACTGCGACGCGGCG
GCAGCTAGCTCGTCGTCATCCAGTGCAGGGTTTTCTTCTTCCACGAGTGGCGAGCGTTCG
TCGACGAGCTCCTCTGCAGCAACCGCCGAGTCGTCGTGGCTACTTAAGCACAACAACAGG
GGCAGTGAAAAAATAGTATTAGGCAACAATTGA

Peptide Sequence

PEP ID

Os07t0569800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:22935622:22937578:1 gene:Os07g0569800 transcript:Os07t0569800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os07t0569800-01)
Sequence

SDKAKYAPSDGLAFFLSPYPSKMSPLDGGGLLGVFTNSTGMNPSAAAPIVAVEFDTFQNE
WDQSSDHIGIDVNSINSTAVKLLSDRSLSNVTEPMVASVSYNNSTRMLAVMLQMAPQDGG
KRYELNSTVDLKSLLPAQVAIGFSAASGWSEERHQVLTWSFNSTLVASEERRENATRGRP
AAAVLAGVVVASVVVVGASICLFVMIRRRRISRRRTREEYEMGGSDDFDMNDEFEQGTGP
RRFLYSQLATATNDFSEDGKLGEGGFGSVYRGVLSEPAGVHVAVKRISKTSKQGRKEYAS
EVSIISRLRHRNLVQLVGWCHGRGDFLLVYELVPNGSLDAHLYGGGATLPWPTRYEIALG
LGSALLYLHSGYEKCVVHRDIKPSNIMLDSAFAAKLGDFGLAKLVDHGDASQTTAVLAGT
MGYMDPEYAASGKASTASDVYSFGIVLLEMCCGRRPVLLQEQSIRSRLLEWVWDLHGRGA
ILEAADERLRGGELELDAKQVECVMVVGLWCAHPDRGVRPSIKQALAALQFEAPLPALPP
TMPVPTYSSLPSLALYCDAAAASSSSSSAGFSSSTSGERSSTSSSAATAESSWLLKHNNR
GSEKIVLGNN

Transcript Sequence

Transcript ID

Os07t0569800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:22935622:22937578:1 gene:Os07g0569800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os07t0569800-01)
Sequence

ACTAGTCAGACAAGGCCAAGTACGCACCCAGCGACGGGCTTGCCTTCTTCCTGTCACCCT
ATCCGTCAAAGATGTCTCCACTCGACGGCGGTGGATTGCTCGGCGTCTTCACCAACAGCA
CTGGCATGAATCCGTCCGCCGCCGCCCCGATCGTCGCGGTGGAGTTCGACACGTTCCAAA
ATGAGTGGGACCAGAGCAGCGACCACATCGGCATCGACGTCAACTCCATCAACTCGACCG
CGGTGAAGTTGCTGTCTGACCGCAGCCTCTCCAACGTCACCGAGCCGATGGTTGCGTCGG
TGAGCTACAACAACAGCACAAGGATGCTGGCCGTCATGCTGCAGATGGCCCCCCAAGATG
GCGGCAAGAGGTACGAGCTCAACAGCACGGTTGACCTCAAGAGCTTGCTCCCCGCGCAGG
TGGCCATCGGATTCTCGGCGGCGAGCGGGTGGTCCGAGGAGCGGCACCAAGTACTCACCT
GGTCTTTCAATTCGACATTGGTGGCGTCTGAAGAACGGAGAGAAAACGCAACGCGAGGTA
GGCCGGCCGCTGCGGTGCTTGCAGGTGTCGTTGTAGCATCCGTCGTCGTCGTCGGGGCCT
CGATCTGTTTGTTTGTAATGATCAGGCGGCGTAGGATATCTCGCCGGCGGACGAGAGAAG
AGTACGAGATGGGCGGCTCCGACGACTTCGACATGAACGATGAGTTCGAGCAAGGCACCG
GTCCGAGGCGATTTCTGTACAGCCAACTGGCCACCGCGACGAACGACTTCTCCGAGGACG
GGAAGCTCGGGGAGGGTGGCTTCGGGTCGGTGTACAGGGGCGTCTTGAGCGAACCGGCCG
GCGTCCACGTCGCCGTCAAGAGGATCTCCAAGACCTCCAAGCAGGGGAGGAAGGAGTACG
CCTCCGAGGTGAGCATCATCAGCCGCCTCCGGCACCGGAACCTGGTGCAGCTCGTCGGCT
GGTGCCACGGCCGCGGCGACTTCCTCCTCGTCTACGAGCTGGTGCCCAACGGTAGCCTCG
ACGCGCACCTCTACGGCGGCGGCGCGACGCTGCCGTGGCCGACCAGGTACGAGATCGCGC
TCGGGCTCGGCTCGGCGCTGCTCTACCTGCACTCCGGCTACGAGAAGTGCGTGGTGCACA
GGGACATCAAGCCCAGCAACATCATGCTCGACTCCGCCTTCGCCGCCAAGCTCGGCGACT
TCGGGCTGGCGAAGCTCGTCGACCACGGCGACGCCTCGCAGACGACGGCGGTCCTGGCGG
GGACGATGGGGTACATGGACCCGGAGTACGCGGCCTCCGGCAAGGCGAGCACCGCGTCCG
ACGTCTACAGCTTCGGCATCGTGCTGCTGGAGATGTGCTGCGGGAGGAGGCCCGTGCTGC
TCCAAGAACAATCCATCAGGTCCCGCCTCCTCGAGTGGGTCTGGGACCTCCACGGCCGCG
GCGCCATCCTCGAGGCGGCCGACGAGCGGCTGCGCGGCGGCGAGCTCGAGCTCGACGCGA
AGCAGGTGGAGTGCGTGATGGTCGTGGGGCTCTGGTGCGCGCACCCGGACCGCGGCGTGC
GGCCGTCCATCAAGCAGGCGCTCGCCGCGCTCCAGTTCGAGGCTCCGCTGCCGGCTCTTC
CTCCGACGATGCCCGTGCCGACGTACTCCTCCTTGCCGAGCCTTGCATTGTACTGCGACG
CGGCGGCAGCTAGCTCGTCGTCATCCAGTGCAGGGTTTTCTTCTTCCACGAGTGGCGAGC
GTTCGTCGACGAGCTCCTCTGCAGCAACCGCCGAGTCGTCGTGGCTACTTAAGCACAACA
ACAGGGGCAGTGAAAAAATAGTATTAGGCAACAATTGATTAGATCATATCTTTAGTTTGA
TGCCACCTTGATGTTGCTTAGCTCTTCGTTGTTTATGTGTATTGTTCTTCCTTGGGCCGC
CGTGTCATTTGTGATATGTACCTCAATTCATATCTCC