Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0569550-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:22922745:22924814:-1 gene:Os07g0569550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os07t0569550-00)
Sequence

ATGCGATCAAGAACCAAATATACTTGCCTCTTGGCTCTCTACTTTTCCCTATCCCTGAAA
ATTGCCCATGTCAATCCTCTGTCCTTCAAGTTGAACTTCACTGAATCAAATCATAATGGA
TCAGCCACAATTCAGCTCCAGGAGGATGCCTTCTACAACAAGGCGGTCAAGCTCACCAAG
GATGAGTTGAATGGAAAGATCACTCAAAGCGTAGGCCGAGCAATCTACACCGATCCAGTG
CCTCTCTGGGATAGCACCACCGGTCAGTTAGCCAGCTTCACAACCCGCTTCACGTTCAAG
ATATATGCACCCACGAACGACAGTTCGTACGGTGAGGGCCTAGCCTTCTTCCTCTCATCA
TACCCTTCTGTGGTCCCCAATAACTCCATGGATGGTTATCTTGGCCTCTTCAGCAATAGT
AATGATCAGAGCGATCCACTCAACCAGATTGTGGCTGTTGAGTTTGACAGCCACAAAAAC
ACTTGGGATCCAGATGGCAACCATGTAGGCATCAACATCCACTCAATTGTATCTGTAGCC
AACGTGACATGGCGAAGTAGTATCAACGATGGCCGGATAGCCAATGCTTGGGTAACTTAC
CAGGCAAATTCAAGGAACTTGAGTGTCTTCTTGTCGTACCAGGACAACCCACAATTCAGT
GGCAACTCCAGCCTATCTTATTCGGTTGATCTCAGCAAATATCTCCCTGACAAAGTGTCC
ATCGGATTCTCTGCTTCCACAGGTAAATTTGTAGAGCTGCACCAGATTCTTTACTGGGAA
TTTGATTCTACAGATGTGCACCTGATGAAGACTGAGAAAACAAAAGGTATATTGGTCATA
AGCTTGTCTACGAGCGGTAGTGTTGTGGTCTGCTCAATTGGCTTGGTTTGCTTCTTTTTA
TGTTTTAGAAGGATTAGAAGGACTACAAGGTCAAGAGAGAAGGAAAAAGAGAAACTAGAC
TGTGATGAGTCCATTGACAGTGAGTTTGAGAAAGGCAAGGGGCCAAGGAGATTCCAATAC
AATGAACTCGTAGTGGCGACGGATAATTTTGCTGCAGAGAGAAAGCTTGGAGAAGGGGGT
TTCGGTGCAGTATACCAGGGTTTCTTGAAGGATCAAAACATTGAAATTGCCATAAAACGA
GTTGCAAAAGGGTCAACACAGGGGAGGAAGGAGTACATCTCTGAGGTCAAGATCATCAGC
AGACTAAGGCATCGGAATCTTGTGCAACTTGTGGGCTGGTGTCATGAGCATGGAGAGTTC
TTGTTAGTCTACGAGTTTATGCCAAACAGGAGCTTGGACAAACACCTCTATGATGGTGGA
AACCTGTTAGCATGGCCATTGCGGTTCAAGATAACCATAGGTGTTGCATCCGCCCTCCTG
TATCTCCACGAGGAGTGGGAACAATGTGTCGTGCATCGTGATGTCAAGCCAAGCAATGTG
ATGCTTGATTCTGGATTCAACGCTAAGCTTGGGGACTTTGGGCTCGCACGGCTTGTAGAC
CATGACCGAGGCTCACAAACTACAGTGATAGCTGGGACCATGGGTTACATGGCTCCAGAG
TGTGTCACTACTGGGAAAGCAAGCAAAGAGACTGATGTCTACAGCTTTGGCATTCTTGCT
CTGGAGATAGCTTGTGGAAGGAGGCCCGTTGTGCCAAAGGAAGATAATGACAGGATCAGT
TTGGTTCAATGGGTTTGGGATCTTTATGGAAGAAATGAGATACTTAATGCAATTGATGGA
AGGCTTGATGGTGAATTTGAAGAGCGGGAAGTTATTTCCTTGATGGTTGTTGGACTTTGG
TGTGCACACCCAGATTATAATATCCGGCCTTCAATTCGCCAGGTCATAAGCGTACTGAAG
TTTGAAGCACCATTACCAGACCTTCCACCAAAGATGCCAGTGGCAATGTACTTTGCACCA
CCAATTTCTCTCTGCAGATTTTCACAGTCATCTAATGGGACACTGAAGGAGCTGGAAAGG
CCGAACAGTTATGGAAATACGAGCTCGTCCAGTGCAACCAATGATTCTTGTGCCCCTCCC
TCTGTTCGGTTGCCAGAGGTTGGTTACTAG

Peptide Sequence

PEP ID

Os07t0569550-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:22922745:22924814:-1 gene:Os07g0569550 transcript:Os07t0569550-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os07t0569550-00)
Sequence

MRSRTKYTCLLALYFSLSLKIAHVNPLSFKLNFTESNHNGSATIQLQEDAFYNKAVKLTK
DELNGKITQSVGRAIYTDPVPLWDSTTGQLASFTTRFTFKIYAPTNDSSYGEGLAFFLSS
YPSVVPNNSMDGYLGLFSNSNDQSDPLNQIVAVEFDSHKNTWDPDGNHVGINIHSIVSVA
NVTWRSSINDGRIANAWVTYQANSRNLSVFLSYQDNPQFSGNSSLSYSVDLSKYLPDKVS
IGFSASTGKFVELHQILYWEFDSTDVHLMKTEKTKGILVISLSTSGSVVVCSIGLVCFFL
CFRRIRRTTRSREKEKEKLDCDESIDSEFEKGKGPRRFQYNELVVATDNFAAERKLGEGG
FGAVYQGFLKDQNIEIAIKRVAKGSTQGRKEYISEVKIISRLRHRNLVQLVGWCHEHGEF
LLVYEFMPNRSLDKHLYDGGNLLAWPLRFKITIGVASALLYLHEEWEQCVVHRDVKPSNV
MLDSGFNAKLGDFGLARLVDHDRGSQTTVIAGTMGYMAPECVTTGKASKETDVYSFGILA
LEIACGRRPVVPKEDNDRISLVQWVWDLYGRNEILNAIDGRLDGEFEEREVISLMVVGLW
CAHPDYNIRPSIRQVISVLKFEAPLPDLPPKMPVAMYFAPPISLCRFSQSSNGTLKELER
PNSYGNTSSSSATNDSCAPPSVRLPEVGY

Transcript Sequence

Transcript ID

Os07t0569550-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:22922745:22924814:-1 gene:Os07g0569550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os07t0569550-00)
Sequence

ATGCGATCAAGAACCAAATATACTTGCCTCTTGGCTCTCTACTTTTCCCTATCCCTGAAA
ATTGCCCATGTCAATCCTCTGTCCTTCAAGTTGAACTTCACTGAATCAAATCATAATGGA
TCAGCCACAATTCAGCTCCAGGAGGATGCCTTCTACAACAAGGCGGTCAAGCTCACCAAG
GATGAGTTGAATGGAAAGATCACTCAAAGCGTAGGCCGAGCAATCTACACCGATCCAGTG
CCTCTCTGGGATAGCACCACCGGTCAGTTAGCCAGCTTCACAACCCGCTTCACGTTCAAG
ATATATGCACCCACGAACGACAGTTCGTACGGTGAGGGCCTAGCCTTCTTCCTCTCATCA
TACCCTTCTGTGGTCCCCAATAACTCCATGGATGGTTATCTTGGCCTCTTCAGCAATAGT
AATGATCAGAGCGATCCACTCAACCAGATTGTGGCTGTTGAGTTTGACAGCCACAAAAAC
ACTTGGGATCCAGATGGCAACCATGTAGGCATCAACATCCACTCAATTGTATCTGTAGCC
AACGTGACATGGCGAAGTAGTATCAACGATGGCCGGATAGCCAATGCTTGGGTAACTTAC
CAGGCAAATTCAAGGAACTTGAGTGTCTTCTTGTCGTACCAGGACAACCCACAATTCAGT
GGCAACTCCAGCCTATCTTATTCGGTTGATCTCAGCAAATATCTCCCTGACAAAGTGTCC
ATCGGATTCTCTGCTTCCACAGGTAAATTTGTAGAGCTGCACCAGATTCTTTACTGGGAA
TTTGATTCTACAGATGTGCACCTGATGAAGACTGAGAAAACAAAAGGTATATTGGTCATA
AGCTTGTCTACGAGCGGTAGTGTTGTGGTCTGCTCAATTGGCTTGGTTTGCTTCTTTTTA
TGTTTTAGAAGGATTAGAAGGACTACAAGGTCAAGAGAGAAGGAAAAAGAGAAACTAGAC
TGTGATGAGTCCATTGACAGTGAGTTTGAGAAAGGCAAGGGGCCAAGGAGATTCCAATAC
AATGAACTCGTAGTGGCGACGGATAATTTTGCTGCAGAGAGAAAGCTTGGAGAAGGGGGT
TTCGGTGCAGTATACCAGGGTTTCTTGAAGGATCAAAACATTGAAATTGCCATAAAACGA
GTTGCAAAAGGGTCAACACAGGGGAGGAAGGAGTACATCTCTGAGGTCAAGATCATCAGC
AGACTAAGGCATCGGAATCTTGTGCAACTTGTGGGCTGGTGTCATGAGCATGGAGAGTTC
TTGTTAGTCTACGAGTTTATGCCAAACAGGAGCTTGGACAAACACCTCTATGATGGTGGA
AACCTGTTAGCATGGCCATTGCGGTTCAAGATAACCATAGGTGTTGCATCCGCCCTCCTG
TATCTCCACGAGGAGTGGGAACAATGTGTCGTGCATCGTGATGTCAAGCCAAGCAATGTG
ATGCTTGATTCTGGATTCAACGCTAAGCTTGGGGACTTTGGGCTCGCACGGCTTGTAGAC
CATGACCGAGGCTCACAAACTACAGTGATAGCTGGGACCATGGGTTACATGGCTCCAGAG
TGTGTCACTACTGGGAAAGCAAGCAAAGAGACTGATGTCTACAGCTTTGGCATTCTTGCT
CTGGAGATAGCTTGTGGAAGGAGGCCCGTTGTGCCAAAGGAAGATAATGACAGGATCAGT
TTGGTTCAATGGGTTTGGGATCTTTATGGAAGAAATGAGATACTTAATGCAATTGATGGA
AGGCTTGATGGTGAATTTGAAGAGCGGGAAGTTATTTCCTTGATGGTTGTTGGACTTTGG
TGTGCACACCCAGATTATAATATCCGGCCTTCAATTCGCCAGGTCATAAGCGTACTGAAG
TTTGAAGCACCATTACCAGACCTTCCACCAAAGATGCCAGTGGCAATGTACTTTGCACCA
CCAATTTCTCTCTGCAGATTTTCACAGTCATCTAATGGGACACTGAAGGAGCTGGAAAGG
CCGAACAGTTATGGAAATACGAGCTCGTCCAGTGCAACCAATGATTCTTGTGCCCCTCCC
TCTGTTCGGTTGCCAGAGGTTGGTTACTAG