Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0568400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:22845061:22849787:-1 gene:Os07g0568400 gene_biotype:protein_coding transcript_biotype:protein_coding description:TB2/DP1 and HVA22 related protein family protein. (Os07t0568400-01)
Sequence

ATGGCGCTTCTGGCCCCCGCCATCTCCGGCGAGGTGGGTTTACGGCTCTTACTGGCACCA
CTAAGCTCTACTGTTGTCATCCGTACAGCCAGTTGTGCAATTGGGGTTGGTCTGCCTGTG
TACTCCACTTTCAGAGCTATTGAAAAGAAGGATCAAAAAGAAAAAGAGCGGTGGCTCTTG
TATTGGGCAGCATATGGATCTTTTAGCATTGCGGAAATCTTTGCTGATCAGATTCTTTCA
AGTGTTCCTTTCTATTATCACGTGAAGTTTGCTATTCTTGTCTGGCTCCAGTTTCCTTCA
AACAGTGGAGCAAAGCATGTATATAGAAGGTATATGCGGCCGTTTTTCCTGAAACATCAA
GCAAAAATCGATAGAATCCTAAATATTCTATCGAAGGAACTAAACAAGTTCGTGAGCAGC
CATGAAGATGAGATCCATTTCATAGAGCACATGGCCGCCAGGGGTGCTTCAACAGCAAAT
TATATAATAAACGGTCCTGAACAATCAGAAGCGGTCAGAGCAGCGATCGAAGGGCCAAAT
TCAACCACAACGGAAGAGGCTGGCACCCCCAGAAATGAAACATGA

Peptide Sequence

PEP ID

Os07t0568400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:22845061:22849787:-1 gene:Os07g0568400 transcript:Os07t0568400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TB2/DP1 and HVA22 related protein family protein. (Os07t0568400-01)
Sequence

MALLAPAISGEVGLRLLLAPLSSTVVIRTASCAIGVGLPVYSTFRAIEKKDQKEKERWLL
YWAAYGSFSIAEIFADQILSSVPFYYHVKFAILVWLQFPSNSGAKHVYRRYMRPFFLKHQ
AKIDRILNILSKELNKFVSSHEDEIHFIEHMAARGASTANYIINGPEQSEAVRAAIEGPN
STTTEEAGTPRNET

Transcript Sequence

Transcript ID

Os07t0568400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:22845061:22849787:-1 gene:Os07g0568400 gene_biotype:protein_coding transcript_biotype:protein_coding description:TB2/DP1 and HVA22 related protein family protein. (Os07t0568400-01)
Sequence

GGCGCCTCCTCCTCCACCACCACCACCACCACCATCCCCCCACCAATTGGACTCAGGGGA
GACCTACCCGCGGAGACGCGAACTCGCCGCGGATTCCTTGCCCTCCACGCCGCAAACCGC
AGCCGCGCCTCCGCCTCCGCGGCGGGATCCCTTGCTCCTCCTCCTCCACCCCCGCGCGGC
GTGCGGAACTCGCCGATGGCGCTTCTGGCCCCCGCCATCTCCGGCGAGGTGGGTTTACGG
CTCTTACTGGCACCACTAAGCTCTACTGTTGTCATCCGTACAGCCAGTTGTGCAATTGGG
GTTGGTCTGCCTGTGTACTCCACTTTCAGAGCTATTGAAAAGAAGGATCAAAAAGAAAAA
GAGCGGTGGCTCTTGTATTGGGCAGCATATGGATCTTTTAGCATTGCGGAAATCTTTGCT
GATCAGATTCTTTCAAGTGTTCCTTTCTATTATCACGTGAAGTTTGCTATTCTTGTCTGG
CTCCAGTTTCCTTCAAACAGTGGAGCAAAGCATGTATATAGAAGGTATATGCGGCCGTTT
TTCCTGAAACATCAAGCAAAAATCGATAGAATCCTAAATATTCTATCGAAGGAACTAAAC
AAGTTCGTGAGCAGCCATGAAGATGAGATCCATTTCATAGAGCACATGGCCGCCAGGGGT
GCTTCAACAGCAAATTATATAATAAACGGTCCTGAACAATCAGAAGCGGTCAGAGCAGCG
ATCGAAGGGCCAAATTCAACCACAACGGAAGAGGCTGGCACCCCCAGAAATGAAACATGA
GCTTGACTTCATCAGTTTCTTAAGTGTGTTTGGCAAGGGCACAGCAAATACATTTGTGTC
GATGTGCTACAGTAATGTTTATTTAGATTATCTTTCCAGCTTATTTATTTAGGGGTTTCC
AGCTTTGTATTTTTCATGGGATTTCCAGCTTGTTAGTGGAATGTGAATATGAGCATGACA
GGTTCTGTGTCGCTTAAGCTAGATCGACACTATCAAACCACTTATTCTGTTGGCATGAGA
TGTGGTAATTTAACGTTTCAGATTTTGCATCT