Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0566800-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:22774149:22775187:-1 gene:Os07g0566800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Toll-Interleukin receptor domain containing protein. (Os07t0566800-01)
Sequence

ATGTCGTCCACCGGGCTTTCCCGCGGCCGCCGGTGCACCATCGCGTCGCGGCTAAACGCG
TCGGCTGAGGCGGCGGTTGCGGCCACCAGCAGCAGCAGGGGGGAGAAGCAGAAGGCGGCG
GTGGCGAGACGGGTGGAGTACTACGACGAGGAGGATGCGCGGGGGGAGGCGCGCTACGAC
GTTTTCATCAACCACAGGGGCGTGGACACCAAGAGGACGGTGGCGCGGCTTTTCTACGAC
CGCCTCGTCGCCGCGGGCGTCCGCGCCTTCCTGGACAACCAGTCAATGCGCCCCGGCGAT
CGCCTCGACGAGCGGATCAGCGAGGCCATCAGCCAGTGCGGCGTCGCGGTGGCCATCTTC
TCGCCGCACTACTGCGACTCCGAGTATTGCCTCCGCGAGCTCGCCCTCCTCGTCGAGTCA
CGGAAAAAGATCATCCCGGTGTTTTACAACATCAAACCCTCGGATCTCGTCCTCCCGCAG
GCCGTCGTCGAGTCCGTCGCTCACCATCCCCGCGACATTGAACGCTTCAAATTCGCGCTA
CGCGAGGTCAAGAACACAGTCGGCCTCACCTACGACACAGCCACAGGGTAG

Peptide Sequence

PEP ID

Os07t0566800-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:22774149:22775187:-1 gene:Os07g0566800 transcript:Os07t0566800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Toll-Interleukin receptor domain containing protein. (Os07t0566800-01)
Sequence

MSSTGLSRGRRCTIASRLNASAEAAVAATSSSRGEKQKAAVARRVEYYDEEDARGEARYD
VFINHRGVDTKRTVARLFYDRLVAAGVRAFLDNQSMRPGDRLDERISEAISQCGVAVAIF
SPHYCDSEYCLRELALLVESRKKIIPVFYNIKPSDLVLPQAVVESVAHHPRDIERFKFAL
REVKNTVGLTYDTATG

Transcript Sequence

Transcript ID

Os07t0566800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:22774149:22775187:-1 gene:Os07g0566800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Toll-Interleukin receptor domain containing protein. (Os07t0566800-01)
Sequence

ATCCACATATCAGGCATCACAATTCACAAACTAACTCGTAGCGATCGATCTCTATTTTGT
TGGAGTTTTTGCTGCTTCCACTCAAATTGTTCAGAGACGTTTCGATCGATCAAGATCAAC
TTGATCGGGATCGCGGCAGCTCGATCAGCTAACTAGAGAACGTCTTGGACTCTTGGATTT
CTCCGCGCTCTCGCAGTATTCTAGGAGACATTTCTTGATCGATATCACTAGCTATATATC
GGTCGTTTGATCATGTCGTCCACCGGGCTTTCCCGCGGCCGCCGGTGCACCATCGCGTCG
CGGCTAAACGCGTCGGCTGAGGCGGCGGTTGCGGCCACCAGCAGCAGCAGGGGGGAGAAG
CAGAAGGCGGCGGTGGCGAGACGGGTGGAGTACTACGACGAGGAGGATGCGCGGGGGGAG
GCGCGCTACGACGTTTTCATCAACCACAGGGGCGTGGACACCAAGAGGACGGTGGCGCGG
CTTTTCTACGACCGCCTCGTCGCCGCGGGCGTCCGCGCCTTCCTGGACAACCAGTCAATG
CGCCCCGGCGATCGCCTCGACGAGCGGATCAGCGAGGCCATCAGCCAGTGCGGCGTCGCG
GTGGCCATCTTCTCGCCGCACTACTGCGACTCCGAGTATTGCCTCCGCGAGCTCGCCCTC
CTCGTCGAGTCACGGAAAAAGATCATCCCGGTGTTTTACAACATCAAACCCTCGGATCTC
GTCCTCCCGCAGGCCGTCGTCGAGTCCGTCGCTCACCATCCCCGCGACATTGAACGCTTC
AAATTCGCGCTACGCGAGGTCAAGAACACAGTCGGCCTCACCTACGACACAGCCACAGGG
TAGGTTTAAAATGCTGCAGCCATTTGGCGCCATTATATTCTCATACTTAGTAGCTAAGCT
CGGTTAGCTTCTCGTTTGATCGCAACTGACGCATTTGTAATGGTGATCTGCCTCTACAGA
GATCTTGCAGAGCTCGTAACATCGGCGGCTACCGCAGTTTTGGAGAACATAGACAAGCAT
GAGGTCACGCAAGGAAGAC