Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0565600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:22688900:22693251:1 gene:Os07g0565600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 37 description:Similar to predicted protein. (Os07t0565600-01);Similar to Peptidyl-prolyl cis-trans isomerase TLP38, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Thylakoid lumen PPIase of 38 kDa) (p38). (Os07t0565600-02)
Sequence	ATGGCGTCGCGAGCGGCGGCCGCGATGGTGCTCGCCGGTGCCCTTCCTGTGTTTCCCGGC CGTCCCCTGGTCGCAGCCGGCGCCAGGTGCTGCGACGGCGGCATTCGCGGGAGGGTCTCC TGCTCCTCCCACCGTCGCTCGGACCATCCCTCCTGCGCGGCTGAGGTGAGCACGCGCTGG TTGCTGGTCTCTCCTCATCCAAATGGCTTCCAAAGCTGTAGCGTTCGCTTCAGTTTAATC GTGTGGTTGTCTGGTTTGGTGCAGGAGGGAGGAGTGGTGGAGCTGCTCAAGGGCGCGGTC GCGGCGCTCGCCGTCATCGCCCAGATTTCCGTGTCGCTCCCGGCGGACGCGATCCTCTAC TCGCCGGACACGAACGTGCCGAGGACGGGGGAGCTGGCGCTGAGGAGGGCCATCCCCGCG AACCCAAACATGAAGACCATACAGGAATCGCTGGAGGACATTTCGTATTTGCTGAGGATA CCGCAGAGGAAGCCGTATGGCTCCATGGAAGGAGACGTAAAAAAGGCCATGAAGATAGCA ATGGACAACAAGGATGCGATCTTGGCAAGTATACCTGTAGAACTCAAGGAAAAGGGCTCG AAGTTATATACCTCCTTGCTTGAAGAGAAGGGTGGTTTGCAAACTCTCTTGAAATATATA AAGGAAAATGATCCTGACAGACTTTCGGTTGCACTTGCTTCTTCTCTTGATACTGTTGCT GAATTGGAGCTGTTACAGGCTCCAGGTTTATCCTTCCTCTTACCACAACAATATTTGGAA TATCCAAGGCTAGCAGGAAGAGGAGTTGTTGAATTCTCAGTGGAGAAAGGTGATGGTTCA ACATTCTTTCCAACTGCTGGTGGTGAACCAAAAAGTGTTGCTACAATTCAGGTAGTGATT GATGGATATTCTGCCCCACTGACTGCTGGAAACTTTGCGAAATTGGTGTTGGATGGGGCA TATGATGGGATAAAACTGAAATGTGCAAGTCAGGCAATTATTGCAGACAACGAGAATGGA AAGAAAGGTTACACTGTTCCATTAGAGGTCATGCCTGCTGGGCAGTTTGAACCGTTATAC AGAACTCCGCTAAGTATTCAGGATGGAGAATTGCCAGTCCTTCCGATGTCTGTATATGGT GCCGTTGCTATGGCCCATAGTGTGGATTCTGATGAATACTCGTCACCAAGCCAATTCTTC TTCTATCTGTATGACAAGAGAAATTCTGGTTTAGGAGGAATATCTTTTGATGAAGGGCAA TTCTCAGTATTCGGGTATACCACAGATGGAAGAGAAGTTCTGTCGCAGATTAAAACTGGA GATATAATTCGTTCTGCCAAGCTTGTACAAGGTAGAGAGCGCCTTGTACTGCCTCCAGAA GCGCCGGCAGAGAGCTGA

Peptide Sequence

PEP ID	Os07t0565600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:22688900:22693251:1 gene:Os07g0565600 transcript:Os07t0565600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 37 description:Similar to predicted protein. (Os07t0565600-01);Similar to Peptidyl-prolyl cis-trans isomerase TLP38, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Thylakoid lumen PPIase of 38 kDa) (p38). (Os07t0565600-02)
Sequence	MASRAAAAMVLAGALPVFPGRPLVAAGARCCDGGIRGRVSCSSHRRSDHPSCAAEVSTRW LLVSPHPNGFQSCSVRFSLIVWLSGLVQEGGVVELLKGAVAALAVIAQISVSLPADAILY SPDTNVPRTGELALRRAIPANPNMKTIQESLEDISYLLRIPQRKPYGSMEGDVKKAMKIA MDNKDAILASIPVELKEKGSKLYTSLLEEKGGLQTLLKYIKENDPDRLSVALASSLDTVA ELELLQAPGLSFLLPQQYLEYPRLAGRGVVEFSVEKGDGSTFFPTAGGEPKSVATIQVVI DGYSAPLTAGNFAKLVLDGAYDGIKLKCASQAIIADNENGKKGYTVPLEVMPAGQFEPLY RTPLSIQDGELPVLPMSVYGAVAMAHSVDSDEYSSPSQFFFYLYDKRNSGLGGISFDEGQ FSVFGYTTDGREVLSQIKTGDIIRSAKLVQGRERLVLPPEAPAES

Transcript Sequence

Transcript ID	Os07t0565600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:22688900:22693251:1 gene:Os07g0565600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 37 description:Similar to predicted protein. (Os07t0565600-01);Similar to Peptidyl-prolyl cis-trans isomerase TLP38, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Thylakoid lumen PPIase of 38 kDa) (p38). (Os07t0565600-02)
Sequence	AGCTCACTGGCTGGGGATAGACGAGACGGCGACCACGACGATGACGATGACGACGACGAC GGCGACGGCAGCAACGGCATCCCCACCACCACCCCCATCTCCGGTTCCTCCCCTCCCCGC GTCTCAACCCACCGGAAATCCATTCAAAAGCACCCGCGCTCCCGCACCAATCCACCGCAC GCCATGGCGTCGCGAGCGGCGGCCGCGATGGTGCTCGCCGGTGCCCTTCCTGTGTTTCCC GGCCGTCCCCTGGTCGCAGCCGGCGCCAGGTGCTGCGACGGCGGCATTCGCGGGAGGGTC TCCTGCTCCTCCCACCGTCGCTCGGACCATCCCTCCTGCGCGGCTGAGGTGAGCACGCGC TGGTTGCTGGTCTCTCCTCATCCAAATGGCTTCCAAAGCTGTAGCGTTCGCTTCAGTTTA ATCGTGTGGTTGTCTGGTTTGGTGCAGGAGGGAGGAGTGGTGGAGCTGCTCAAGGGCGCG GTCGCGGCGCTCGCCGTCATCGCCCAGATTTCCGTGTCGCTCCCGGCGGACGCGATCCTC TACTCGCCGGACACGAACGTGCCGAGGACGGGGGAGCTGGCGCTGAGGAGGGCCATCCCC GCGAACCCAAACATGAAGACCATACAGGAATCGCTGGAGGACATTTCGTATTTGCTGAGG ATACCGCAGAGGAAGCCGTATGGCTCCATGGAAGGAGACGTAAAAAAGGCCATGAAGATA GCAATGGACAACAAGGATGCGATCTTGGCAAGTATACCTGTAGAACTCAAGGAAAAGGGC TCGAAGTTATATACCTCCTTGCTTGAAGAGAAGGGTGGTTTGCAAACTCTCTTGAAATAT ATAAAGGAAAATGATCCTGACAGACTTTCGGTTGCACTTGCTTCTTCTCTTGATACTGTT GCTGAATTGGAGCTGTTACAGGCTCCAGGTTTATCCTTCCTCTTACCACAACAATATTTG GAATATCCAAGGCTAGCAGGAAGAGGAGTTGTTGAATTCTCAGTGGAGAAAGGTGATGGT TCAACATTCTTTCCAACTGCTGGTGGTGAACCAAAAAGTGTTGCTACAATTCAGGTAGTG ATTGATGGATATTCTGCCCCACTGACTGCTGGAAACTTTGCGAAATTGGTGTTGGATGGG GCATATGATGGGATAAAACTGAAATGTGCAAGTCAGGCAATTATTGCAGACAACGAGAAT GGAAAGAAAGGTTACACTGTTCCATTAGAGGTCATGCCTGCTGGGCAGTTTGAACCGTTA TACAGAACTCCGCTAAGTATTCAGGATGGAGAATTGCCAGTCCTTCCGATGTCTGTATAT GGTGCCGTTGCTATGGCCCATAGTGTGGATTCTGATGAATACTCGTCACCAAGCCAATTC TTCTTCTATCTGTATGACAAGAGAAATTCTGGTTTAGGAGGAATATCTTTTGATGAAGGG CAATTCTCAGTATTCGGGTATACCACAGATGGAAGAGAAGTTCTGTCGCAGATTAAAACT GGAGATATAATTCGTTCTGCCAAGCTTGTACAAGGTAGAGAGCGCCTTGTACTGCCTCCA GAAGCGCCGGCAGAGAGCTGATACAACGGCAAGCTTCGCAAACTGGAAACATTCTTTCAT TGGTCAGGAGACTTAGCATATTTTATACCATAAATCATGTAAACCTGACTGAGCAGTTCA TCAAATTTATATATAGAATCACTGCAAATGTTCATC