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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0565100-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:22657270:22659266:-1 gene:Os07g0565100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S11. (Os07t0565100-00)
Sequence

ATGGCTGAGCAGACTGAGAAGGCTTTCCTGAAGCAGCCAAAGGTTTTCCTCAGCTCAAAG
AAGTCTGGCAAGGGTAAGAAGCCAGGCAAGGGTGGCAACCGCTTCTGGAAGAGCATTGGC
CTTGGCTTCAAGACCCCCAGGGAAGCAATTGAAGGGACATACATTGACAAGAAGTGCCCA
TTCACTGGAACTGTTTCTATCAGAGGCAGAATCATTGCTGGAACATGCCACAGTGCCAAG
ATGAACAGAACTATCATTGTTCGCAGGAACTACCTCCATTTTGTCAAGAAATATCAGAGG
TATGAGAAGAGGCATTCCAACATTCCGGCTCACGTCTCCCCATGCTTCCGTGTCAAGGAA
GGTGACCATGTCATCATTGGCCAGTGCAGGCCGCTGTCGAAAACTGTGAGGTTCAACGTC
CTGAAGGTCATCCCAGCTGGATCCACCGGCGGCAGCGGCGGCAAGAAGGCCTTCACCGCA
GCATGA

Peptide Sequence

PEP ID

Os07t0565100-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:22657270:22659266:-1 gene:Os07g0565100 transcript:Os07t0565100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S11. (Os07t0565100-00)
Sequence

MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP
FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE
GDHVIIGQCRPLSKTVRFNVLKVIPAGSTGGSGGKKAFTAA

Transcript Sequence

Transcript ID

Os07t0565100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:22657270:22659266:-1 gene:Os07g0565100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S11. (Os07t0565100-00)
Sequence

GCCGCCGCATCCTCCTTCGCAAGCCTCGCCTCCACTCCCCGCGCCGCCGCCGCCGCCGCC
GACTCGCCGGTCGTCACCCTCGCCCCGCAGCCATGGCTGAGCAGACTGAGAAGGCTTTCC
TGAAGCAGCCAAAGGTTTTCCTCAGCTCAAAGAAGTCTGGCAAGGGTAAGAAGCCAGGCA
AGGGTGGCAACCGCTTCTGGAAGAGCATTGGCCTTGGCTTCAAGACCCCCAGGGAAGCAA
TTGAAGGGACATACATTGACAAGAAGTGCCCATTCACTGGAACTGTTTCTATCAGAGGCA
GAATCATTGCTGGAACATGCCACAGTGCCAAGATGAACAGAACTATCATTGTTCGCAGGA
ACTACCTCCATTTTGTCAAGAAATATCAGAGGTATGAGAAGAGGCATTCCAACATTCCGG
CTCACGTCTCCCCATGCTTCCGTGTCAAGGAAGGTGACCATGTCATCATTGGCCAGTGCA
GGCCGCTGTCGAAAACTGTGAGGTTCAACGTCCTGAAGGTCATCCCAGCTGGATCCACCG
GCGGCAGCGGCGGCAAGAAGGCCTTCACCGCAGCATGAGCTTGTACTCGCATTATTCATG
GGTAGTTTATAGACAGATCCTTTTGCTTGAAGTCCTGGCAGGGCTGGTGTTTTGACCCTA
TCGATTTGGATATTGTTCCCAACAAAACGAAGTCTTATCATCAGAACGTGTTTTATGGAA
TCTACTCTATGCAAAGTTTTGTTAAGATGCCTGTT