Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0562700-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:22487465:22488588:1 gene:Os07g0562700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type III chlorophyll a/b-binding protein (Fragment). (Os07t0562700-01);Similar to Type III chlorophyll a/b-binding protein (Fragment). (Os07t0562700-02)
Sequence	ATGGCGTCCACGATCATGGCCCCAACCTCCCGCGTCCTCGCCGCCAAGACCCCCTTCCTC GGCCATCCCCGCCCCTCCAATGCCCCCGTCCGCGACATCGCCGCCGCCGCCACCGGCCGC ATCACCATGAGCAAGGAGCTGTGGTACGGGCCGGATAGGGTGAAGTACCTGGGGCCATTC TCGGCGCAGACGCCGTCGTACCTGAGGGGCGAGTTCCCGGGCGACTACGGGTGGGACACG GCGGGGCTCTCCGCGGACCCGGAGGCGTTCGCGAGGAACAGGGCGCTGGAGGTGATCCAC GGCCGGTGGGCGATGCTCGGCGCGCTGGGCTGCATCACGCCGGAGGTGCTCGAGAAGTGG GTGCGCGTCGACTTCAAGGAGCCCGTGTGGTTCAAGGCCGGCGCCCAGATCTTCTCCGAC GGCGGCCTCGACTACCTCGGCAACCCCAACCTGGTGCACGCCCAGAGCATCCTCGCCGTG CTGGGATTCCAGGTCGTCCTCATGGGCCTCGTCGAGGGCTACCGCATCAACGGCCTCCCC GGCGTCGGCGACGGCAACGACCTCTACCCCGGCGGCCAGTACTTCGACCCGCTCGGCCTC GCCGACGACCCCGTCACCTTCGCCGAGCTCAAGGTCAAGGAGATCAAGAATGGCCGCCTC GCCATGTTCTCCATGTTCGGCTTCTTCGTCCAGGCCATCGTCACCGGCAAGGGCCCCTTG GAGAACCTGCTCGACCACCTCGCCGACCCCGTCGCCAACAACGCCTGGGTCTACGCCACC AAGTTCACGCCGGGCTCGTGA

Peptide Sequence

PEP ID	Os07t0562700-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:22487465:22488588:1 gene:Os07g0562700 transcript:Os07t0562700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type III chlorophyll a/b-binding protein (Fragment). (Os07t0562700-01);Similar to Type III chlorophyll a/b-binding protein (Fragment). (Os07t0562700-02)
Sequence	MASTIMAPTSRVLAAKTPFLGHPRPSNAPVRDIAAAATGRITMSKELWYGPDRVKYLGPF SAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKW VRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLP GVGDGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL ENLLDHLADPVANNAWVYATKFTPGS

Transcript Sequence

Transcript ID	Os07t0562700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:22487465:22488588:1 gene:Os07g0562700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type III chlorophyll a/b-binding protein (Fragment). (Os07t0562700-01);Similar to Type III chlorophyll a/b-binding protein (Fragment). (Os07t0562700-02)
Sequence	AGCAGAAGCAGCAGCAGCAGCTCAGCCGCCGCCGATGGCGTCCACGATCATGGCCCCAAC CTCCCGCGTCCTCGCCGCCAAGACCCCCTTCCTCGGCCATCCCCGCCCCTCCAATGCCCC CGTCCGCGACATCGCCGCCGCCGCCACCGGCCGCATCACCATGAGCAAGGAGCTGTGGTA CGGGCCGGATAGGGTGAAGTACCTGGGGCCATTCTCGGCGCAGACGCCGTCGTACCTGAG GGGCGAGTTCCCGGGCGACTACGGGTGGGACACGGCGGGGCTCTCCGCGGACCCGGAGGC GTTCGCGAGGAACAGGGCGCTGGAGGTGATCCACGGCCGGTGGGCGATGCTCGGCGCGCT GGGCTGCATCACGCCGGAGGTGCTCGAGAAGTGGGTGCGCGTCGACTTCAAGGAGCCCGT GTGGTTCAAGGCCGGCGCCCAGATCTTCTCCGACGGCGGCCTCGACTACCTCGGCAACCC CAACCTGGTGCACGCCCAGAGCATCCTCGCCGTGCTGGGATTCCAGGTCGTCCTCATGGG CCTCGTCGAGGGCTACCGCATCAACGGCCTCCCCGGCGTCGGCGACGGCAACGACCTCTA CCCCGGCGGCCAGTACTTCGACCCGCTCGGCCTCGCCGACGACCCCGTCACCTTCGCCGA GCTCAAGGTCAAGGAGATCAAGAATGGCCGCCTCGCCATGTTCTCCATGTTCGGCTTCTT CGTCCAGGCCATCGTCACCGGCAAGGGCCCCTTGGAGAACCTGCTCGACCACCTCGCCGA CCCCGTCGCCAACAACGCCTGGGTCTACGCCACCAAGTTCACGCCGGGCTCGTGAATGGC CCAGCCGCCATTGTAGACTACTCTCTCTCTCCATCGCTCGATGTACCAATGCTTGCACAG ATTGTACGATGCTGTGATGAATCTGATATGATCCATCCAGAATTCAGAAACTGAAAAAAG TTGGGGTTTGCA