Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0561500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:22416201:22417146:1 gene:Os07g0561500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os07t0561500-01)
Sequence

ATGGACGCCGCCGCCGTCGCAGCTGCCGCGTCGTCGCAGCAGCCGGCGGCCGCCCCGCCC
CTTGCCGGGCGTGTGGCCATCGTGACCGGCGCGTCGCGCGGCATCGGGCGCGCCATCGCG
GCCCACCTCTCCGCGCTCGGCGCCAGCGTCGTGGTCGGGTACGCGTCCAGCGCCGCGAAG
GCCGACGCGCTCGCCGCGGGGCTTCCCCGCGCCGTGGCGGTGAGGGCCGACGTGGCCGAC
GAGGCCGGCGTGCGGTCGCTCTTCGACGCCGCCGAGTCCGCCTTCGGCGCCGGTGCGCCG
CACATCGTGGTGGCGAACGCGGCGGTGCTCGACGACAAGTATCCCACCCTGGTGGACACC
GCGACGGCGGACTTCGACCGCACCTTCGCCGTCAACACGCGCGGCGCGTTCCTGTGCCTC
CGCGAGGCGGCCCACCGGCTGCCCCGCGGCGGCGGCGGCCGCATCGTGGCGATCACCTCG
TCGGTGGTCGGGTCGCATCCGACGGGGTACTCCGCGTACACGGCGTCGAAGGCGGCCGTG
GAGGCGATGGTGCGGACGATGGCGAAGGAGCTCAAGGGCACCCGCATCACGGCCAACTGC
GTCGCGCCGGGGGCCACGGCGACGGACATGTTCTTCGCCGGGAAGAGCGAGGAGCGCGTC
GACGAGATCAAGGCCACGAACCCGATGGGGCGGCTCGGCGAGGCCGGCGACATCGCGCCA
GTGGTCGGGTTCCTCTGCACCGACGCCGCCGAGTGGGTCAACGGCCAGGTCATCCGGGTC
AACGGCGGGTACGTGTGA

Peptide Sequence

PEP ID

Os07t0561500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:22416201:22417146:1 gene:Os07g0561500 transcript:Os07t0561500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os07t0561500-01)
Sequence

MDAAAVAAAASSQQPAAAPPLAGRVAIVTGASRGIGRAIAAHLSALGASVVVGYASSAAK
ADALAAGLPRAVAVRADVADEAGVRSLFDAAESAFGAGAPHIVVANAAVLDDKYPTLVDT
ATADFDRTFAVNTRGAFLCLREAAHRLPRGGGGRIVAITSSVVGSHPTGYSAYTASKAAV
EAMVRTMAKELKGTRITANCVAPGATATDMFFAGKSEERVDEIKATNPMGRLGEAGDIAP
VVGFLCTDAAEWVNGQVIRVNGGYV

Transcript Sequence

Transcript ID

Os07t0561500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:22416201:22417146:1 gene:Os07g0561500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os07t0561500-01)
Sequence

AGTCACGGATGAGCAAATCCAGTCCAATCGATTCCAACTCTCTCTAGTGACCACTCGACG
CGAACACCGCACGCTACACTCGCTCGAGCGAAGAAATGGACGCCGCCGCCGTCGCAGCTG
CCGCGTCGTCGCAGCAGCCGGCGGCCGCCCCGCCCCTTGCCGGGCGTGTGGCCATCGTGA
CCGGCGCGTCGCGCGGCATCGGGCGCGCCATCGCGGCCCACCTCTCCGCGCTCGGCGCCA
GCGTCGTGGTCGGGTACGCGTCCAGCGCCGCGAAGGCCGACGCGCTCGCCGCGGGGCTTC
CCCGCGCCGTGGCGGTGAGGGCCGACGTGGCCGACGAGGCCGGCGTGCGGTCGCTCTTCG
ACGCCGCCGAGTCCGCCTTCGGCGCCGGTGCGCCGCACATCGTGGTGGCGAACGCGGCGG
TGCTCGACGACAAGTATCCCACCCTGGTGGACACCGCGACGGCGGACTTCGACCGCACCT
TCGCCGTCAACACGCGCGGCGCGTTCCTGTGCCTCCGCGAGGCGGCCCACCGGCTGCCCC
GCGGCGGCGGCGGCCGCATCGTGGCGATCACCTCGTCGGTGGTCGGGTCGCATCCGACGG
GGTACTCCGCGTACACGGCGTCGAAGGCGGCCGTGGAGGCGATGGTGCGGACGATGGCGA
AGGAGCTCAAGGGCACCCGCATCACGGCCAACTGCGTCGCGCCGGGGGCCACGGCGACGG
ACATGTTCTTCGCCGGGAAGAGCGAGGAGCGCGTCGACGAGATCAAGGCCACGAACCCGA
TGGGGCGGCTCGGCGAGGCCGGCGACATCGCGCCAGTGGTCGGGTTCCTCTGCACCGACG
CCGCCGAGTGGGTCAACGGCCAGGTCATCCGGGTCAACGGCGGGTACGTGTGATGCATAG
CTCGTGGATTTATTGGCGGGAATAAAGTTCGAGTGTTCGCATGTTG