Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0560300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:22370280:22372480:-1 gene:Os07g0560300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os07t0560300-01)
Sequence	ATGGGAGAAGAGGCGGCGACGGCGGCGGCGGCGGAGCGAGATGAGCAGGGGAGTGTCACG GCGGCGCTCGACGCCATTACCGGTTTGGTGTCTGCCTCCTTGGCCGCTTCGCTCTTCCCG TACAAGTGGCAGCTCATCAGGGACAGGCTCAACCGGCTCCACGCCGGCCTCGCCGACATA GCCACCGGCGGCGGTGAAGGCGGCGAGGGGCATGGGGCGTTGGCGGGGGTTCTTGGGGCG GTGGTGGAGACGGCGAGGGAGGCGTCGGAGCTGGTGCCGAGGAGCCAGGGGAGGCACTAC GGGGGAGGGAAGCTGCGGCTGCGGAGCGACCTCGACGTCGTGGCGGGCACGCTCGACGCG CTCGTGGCGCGGGTGGACGAGGTGTACGCGTCGGGCGCGCTGACGCGGGCGCGGGCGCTC GTCGTGTCGAGGCCCTGCGCCGGCGCCAGCCGCGACGACGTGCGGTTCTACGTGCGGGAC CTGTTCGCGAGGCTCAGGGTGGGCGGCGCCGAGATGCGGGGGGAGGCCGCCGCCGCGCTC GCCGAGGTGCTGCACGACGACGAGAAGTGCGTCCGCGTCGTCGTGTCCGACGTCGCCGAC GGCGTCTGCGTCCTCGTCTGGCTGCTCGAGTGCCCCGACGCCTGCGTCCAGGAGGAGGTC CTGGAGGCCGTCTCCGTGATCGCCGGGTTTGAGGCTTACAGAGGCGACCTTGTCGTCGGC GGCGTCATCGCTCCGGTGATCCGTGTCCTCGACAGTGCCGGGGACAGGCCCTCGGCGAAG GAGCGGGCGGCGCGGTTGCTGTGCAAGCTCACCGAGAACTCCGACAACGCGTGGGCCGTC GCCGCGCACGGCGGCGTCACGGCATTGCTCAACGTCTGCGCCGACTACACCGCCAGCGGC GGCGAGCTCGTGTGCGCGGCTTGCCGTGTGCTGAGGAGCCTCGCCGGCGTCGACGAGATC AGAAAGTACATGGTGGCCGAGGCCGGCGCGGCTCCGGTGCTCGTGTCGCTCTGCCGGGGC GCCGCGGACGAGGCGGCGCAAATCCAGGCGATGGAGCTCCTCGCCGCCATCGCCTCCGGC GACAGCTCCGTCAGGGAGGCCGTGCTCCAGGAAGGCGCCGTCGAGTCCCTGGTCAGCGTG CTCGACCCGGCCTCCCCGCGCTCCTCCAAGGCGCGGGAGGTCGCGCTCCGCGCCATCGAC GCGCTCTGCCTCTCCTCCCCACCCTTGACATCCCGGCTCGTCGCCGCCGGCTTCCTCGAC CGCGTCCTCGTCTTCCTCCGCAGCGGCGACGCCACGCTGCAGCACTGCGCCCTGAAGGCG GCGCACCGGCTATGCCACGCCTCGGAGGACACCAAGAAGGCCATGGGCGACGCCGGGTTC ATGCCGGAGCTCGTGAGCATCCTCCACGCCGCCAAGTCGCTCGAGGCGCGGGACATGGCG GCGGAGGCGCTCTGCGCCATGGTGTCCGTGCACCGCAACCGGAAGCGGTTCGTCCAGGAA GACCGCAACGTGGCGCAGGTACTGCAGCTGCTTGGCCCCGACGACGAGAAGCTCTCGCCG GCGAAGCGCTTCTTGCTCTCCACCCTGATGCACCTCAGCGACAGCACCTCCGGCCGCCGG AAGATCATGTCATCGGAGCATCTCAGGAATCTCGAGAGGCTAGCAGAGACGAACGTGACG GACGCCAAGAAGATCGTGAAGAAGCTTGGCGGGAGCAAGCTCAGGAACATCTTCCATGGC ATCTGGAGCCTGCAGAAAGCTTGA

Peptide Sequence

PEP ID	Os07t0560300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:22370280:22372480:-1 gene:Os07g0560300 transcript:Os07t0560300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os07t0560300-01)
Sequence	MGEEAATAAAAERDEQGSVTAALDAITGLVSASLAASLFPYKWQLIRDRLNRLHAGLADI ATGGGEGGEGHGALAGVLGAVVETAREASELVPRSQGRHYGGGKLRLRSDLDVVAGTLDA LVARVDEVYASGALTRARALVVSRPCAGASRDDVRFYVRDLFARLRVGGAEMRGEAAAAL AEVLHDDEKCVRVVVSDVADGVCVLVWLLECPDACVQEEVLEAVSVIAGFEAYRGDLVVG GVIAPVIRVLDSAGDRPSAKERAARLLCKLTENSDNAWAVAAHGGVTALLNVCADYTASG GELVCAACRVLRSLAGVDEIRKYMVAEAGAAPVLVSLCRGAADEAAQIQAMELLAAIASG DSSVREAVLQEGAVESLVSVLDPASPRSSKAREVALRAIDALCLSSPPLTSRLVAAGFLD RVLVFLRSGDATLQHCALKAAHRLCHASEDTKKAMGDAGFMPELVSILHAAKSLEARDMA AEALCAMVSVHRNRKRFVQEDRNVAQVLQLLGPDDEKLSPAKRFLLSTLMHLSDSTSGRR KIMSSEHLRNLERLAETNVTDAKKIVKKLGGSKLRNIFHGIWSLQKA

Transcript Sequence

Transcript ID	Os07t0560300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:22370280:22372480:-1 gene:Os07g0560300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os07t0560300-01)
Sequence	ACAGCTATCACACGTACTTATACCTCCGCCGCTTCTTCCTCTTCCCTCCCATTTCGCGCA TTTGCAAGAATGCGTCGTTGAGCTTAGCGGGTGAGGTGGTCGGAGGCATGGGAGAAGAGG CGGCGACGGCGGCGGCGGCGGAGCGAGATGAGCAGGGGAGTGTCACGGCGGCGCTCGACG CCATTACCGGTTTGGTGTCTGCCTCCTTGGCCGCTTCGCTCTTCCCGTACAAGTGGCAGC TCATCAGGGACAGGCTCAACCGGCTCCACGCCGGCCTCGCCGACATAGCCACCGGCGGCG GTGAAGGCGGCGAGGGGCATGGGGCGTTGGCGGGGGTTCTTGGGGCGGTGGTGGAGACGG CGAGGGAGGCGTCGGAGCTGGTGCCGAGGAGCCAGGGGAGGCACTACGGGGGAGGGAAGC TGCGGCTGCGGAGCGACCTCGACGTCGTGGCGGGCACGCTCGACGCGCTCGTGGCGCGGG TGGACGAGGTGTACGCGTCGGGCGCGCTGACGCGGGCGCGGGCGCTCGTCGTGTCGAGGC CCTGCGCCGGCGCCAGCCGCGACGACGTGCGGTTCTACGTGCGGGACCTGTTCGCGAGGC TCAGGGTGGGCGGCGCCGAGATGCGGGGGGAGGCCGCCGCCGCGCTCGCCGAGGTGCTGC ACGACGACGAGAAGTGCGTCCGCGTCGTCGTGTCCGACGTCGCCGACGGCGTCTGCGTCC TCGTCTGGCTGCTCGAGTGCCCCGACGCCTGCGTCCAGGAGGAGGTCCTGGAGGCCGTCT CCGTGATCGCCGGGTTTGAGGCTTACAGAGGCGACCTTGTCGTCGGCGGCGTCATCGCTC CGGTGATCCGTGTCCTCGACAGTGCCGGGGACAGGCCCTCGGCGAAGGAGCGGGCGGCGC GGTTGCTGTGCAAGCTCACCGAGAACTCCGACAACGCGTGGGCCGTCGCCGCGCACGGCG GCGTCACGGCATTGCTCAACGTCTGCGCCGACTACACCGCCAGCGGCGGCGAGCTCGTGT GCGCGGCTTGCCGTGTGCTGAGGAGCCTCGCCGGCGTCGACGAGATCAGAAAGTACATGG TGGCCGAGGCCGGCGCGGCTCCGGTGCTCGTGTCGCTCTGCCGGGGCGCCGCGGACGAGG CGGCGCAAATCCAGGCGATGGAGCTCCTCGCCGCCATCGCCTCCGGCGACAGCTCCGTCA GGGAGGCCGTGCTCCAGGAAGGCGCCGTCGAGTCCCTGGTCAGCGTGCTCGACCCGGCCT CCCCGCGCTCCTCCAAGGCGCGGGAGGTCGCGCTCCGCGCCATCGACGCGCTCTGCCTCT CCTCCCCACCCTTGACATCCCGGCTCGTCGCCGCCGGCTTCCTCGACCGCGTCCTCGTCT TCCTCCGCAGCGGCGACGCCACGCTGCAGCACTGCGCCCTGAAGGCGGCGCACCGGCTAT GCCACGCCTCGGAGGACACCAAGAAGGCCATGGGCGACGCCGGGTTCATGCCGGAGCTCG TGAGCATCCTCCACGCCGCCAAGTCGCTCGAGGCGCGGGACATGGCGGCGGAGGCGCTCT GCGCCATGGTGTCCGTGCACCGCAACCGGAAGCGGTTCGTCCAGGAAGACCGCAACGTGG CGCAGGTACTGCAGCTGCTTGGCCCCGACGACGAGAAGCTCTCGCCGGCGAAGCGCTTCT TGCTCTCCACCCTGATGCACCTCAGCGACAGCACCTCCGGCCGCCGGAAGATCATGTCAT CGGAGCATCTCAGGAATCTCGAGAGGCTAGCAGAGACGAACGTGACGGACGCCAAGAAGA TCGTGAAGAAGCTTGGCGGGAGCAAGCTCAGGAACATCTTCCATGGCATCTGGAGCCTGC AGAAAGCTTGACGACGACAAGAACCAGCTCACCGCTAGTACTATACTACTGCTCGTATGG CCTTAGCTAACACACATGTTCGCCTCATGTTTTTTTGTAACCGTGAATGGACGAATCAAT CCCAAGTGTATTCTACTACTCCACTCGATGATGAATTCTTGATACTCAGAGAACTCATCA CTCATCCTCTGTGTATACTAGCTCATCTCATCCGTGTCAAATAAAAGTACAAAAAAAAAA TCCATTCGAGAAAGC