Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0555200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:22114961:22120060:1 gene:Os07g0555200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rice tungro spherical virus (RTSV) resistance gene, RTSV resistance gene, eukaryotic translation initiation factor 4G description:Similar to Eukaryotic translation initiation factor 4g (Fragment). (Os07t0555200-01);Similar to Eukaryotic translation initiation factor 4g (Fragment). (Os07t0555200-02);Similar to predicted protein. (Os07t0555200-03);Similar to predicted protein. (Os07t0555200-04);Similar to predicted protein. (Os07t0555200-05)
Sequence	ATGTCCCAGCGAGGGGACAGGGGCGAGGGGCACGCGAGGAGACCCGGCCGGTCCAGCAGC TTCGGCGGCGGCCACCGCGGAGGCGGAGGAGTCGGCGGCGCGGGCAAGGGCGGCGGGGGC TCCTCCGGCCAGCCTCCCCTCGCAACTAACCGCAGCTTCAGGAAGTCCGGCAATGGCCAT GGCGGGCACCAGAGGGCTGTGAGCCAACCCGACACGCACGGCTTCCAGCCTGCACCTGCC CCGACCGCTCTGCAGACGCCGCCGCTGCGCCCGCCGGCACCTCAGAATGCGCCGGCGCAT GTCCCTGTTCCCGCACCACGTCCTCAGCACCATGATCCGTCTGGAGCGCGAGCACCCACC CTACCACCTTCCAGCGAGAACACGGCCAATGCGCCACCACTGAAAGGTATTCCTCATGCC GCTCCAAGGGCACCATCAAGGATTTCAAGCACGTCCACTTCACAAGGAGCACCAAAAGGT GGAGCATATAATCTTCAGTTTGGCAGTTTCCCAATGAATGGTGGAACTGGTGGTAGCACA ATGCAATTCCCTGCCAGGACAAGCTCAGCTCCTCCTAATTTGGATGAGCAAAAACGCATG CAGGCCCTCCCTGAAGGTCATAAGGTTGTACCTTCTGGGCTTGTTCCACAAGCTCCAAAA CATCAGCAGCAACAGCAGCCGTTGCAGCAGCAGAAGCAACAGCCGCAGTCACAGCCACCA CTGCAGCAAACAAGAAAGGATGTTGTTAGTTCTAATCATTCATCGAAACCTATCAACCCT CACATTCCTTCCCAAGTTAAGAGCTCTGTGCATGTCTCACCATCCGTGCCCAATGTTGCA CCACCAAGACCCCCTGTTCAGCAGATACCTGGGATGCCCATGTCAATGCCATTTCACCAC CAGGCACCCTTGCAGTTTGGCGGTCACAACCCACAAATTCCACCACAGGGAGTTGTGCCC AGTTCACTACAAATGTCTATGGGATTGCATGGCGCCAACGCACCCCAGGTTGCACAGCAA ATGTACATCCCTACCATTCAGCACCATCATCAACTGCAACCGCCAACAATGATGCATCAA GCAGCAGGTATACCTTATGGTCCAGCTGCTCATCAACTCACTCAGATGAGTGGTATGATG AATGTGGGGGTGGCACCTCAGTTTACTCCACAACAGCCAAATAAGTATGTTACAGGCCCA ACTCGGAAGACCACAGTCAAAATTACTCATCCAGATACTCATGAAGAATTGAAGCTCGAT AAGAGGATGGACTCTTCTGGGCAAAGGGGTTTACCTAGTGTACAACAACAATCCCAGCCG GTCAGTACTTATGGATCTCCTATGGGCTTCTACCAGCAAAATTCGTATAACCAGTCAACT ATGTTTTACCCCACAACCTCTGGTGTCGGTCAGGTTCCCACTGTATCACAGGGTCCTAGG TTTGTATCCACACAAACAGTTTCATACATCAGCCCATCGATGAACACAGGTCCTGGCAGT AACAAGGACAACCTAGCAGGGTCTACAACATCTGGACACTCCCAAGTCACAGGCAAACCA CACCCAGCTGGTTTGCACATGGAGAAATCCGGGGTACAAACGGTCACGATAAGTGCGCCG CCTGGTAAATCAGATGTGAACAAGTTAAAACCAGCTGAAGATGTTGTATCACATCGACAA AAGGATAATGAAGCTGTTTCTGGGGTCCGTAAATCAGGTGAAAATGAGAGCAAAGCTTCA CCGATCACGGAGAAGCATCCCACACCAGTGAGCCAACCCTTACAAGCTCTAGCTGCAAAT CCAGAAACTACAGCAGCTGCATCTTTTGTTGTGAATTCTGTTCCTGGAGATGATGGAAAA AGCAAAGAATCTATTCAAAGAACTGGATCATTTAAGGATAGCAATAAGAACGCCACTAAG GACACCAGGAATTTATCACAAGAACCACAGTCAGCTTCATCTGCTGAAGATTTAAAGGTG CATACTTCTGTAAAGGATGTATGTTGTGGTGTTAGTCTCATGGAATCCAAGGGTGTGAAT AAAGAGTCTGAACAGACCAATGCAGCTTCCGCTTCACCGACTGAAATGTTAAAAGCTGCT GATGCTTCTAGCATTGATAGGAGCTCTGCAAGATCGACCTCTGAGAGCACTGAGAATGTT CAAGAAGTAGGAAAATCTGATGTTGCTATTGGTGATTCTGAGAAAAGTGGAATAACTAAC AAAGTTTCACCAGATCTTACAAAGGATGATATTTCTTCTGGTTCAACTGGGAATGAATCA CATGAAGTTTGCACGCTAGATTTGGCGGAGCAATTACCTGTGGGAGCTTCTAATCCTGAT AATTTAGATACTGCAACTTCTGTAACTGACCAGGGACAGCTTCTCAAAGAACCCAGCTCA TCAGTATCTGATGAGAATGTTATTATGGACAGATCGCATCAGAGTGCTGAAAAAATGTCA GATTTGGTTGATGACACTGTTGCTTCTGTTGCCAGTTCTGAAACTTTGCCAGAATCTATA ATTCAAAATGCCAATGCTAAAGGTAACACAAGTGGTAATCAGGAAACAGGGTCTGCTACA TCTAGCAATATTCTTAATGTGTTGCCGGTACCTCATTCAGTGGCATCAGAGGATCCACTG AAACCAGAAAGTATGTTAAAGGATCAATCGAGTAGTGCACCAGCAGCCTCTGCTCGACCA GTTTCAAGGGAAAAACCTAGCGTGGAAATTACCAGAACAAAGTTTACAGCTGTGAAAAAG AAGAAAAGAAGAGAAATGCTTTCAAAAGCTGATGCTGCCGGGAGCTCAGATCTTTATAAT GCATACAAGGGACCTGAGGAAAAAGTAGATTTCATTGGTGCCTCAGAGAGTCTTGATAGT TCTTCAATTGCTGATCATGAGCTACCAGACGAGTCCTCCGAAAAGGAGGTTAATATGGGT GAGGACGAGGGAAAGAAAAAGGTTGAGCTTGATGATTGGGAAGACGCTGCAGAAATGTCT ACTCCAAAGTTGGAGAGGTCTGATTCCAGCAATCAAACAACCGAAGCTAATGGGAGGAAG AGATATTCACGCGATTTTTTGCTAACTTTAGCACAGAGTTGTACTAATCTTCCTGTTGGT TTCCAGATGATTGAGTACGCCAGCGTTCTGTTCCCTAATTTGGCCGGAAAGTCTTATGTT GTTGATCACCCAAGTCCTGGAAGGGGAGCTGACAGGCCAGCATCTCGTGGTGATCGCCGT GGTGTTGTCATTGAGGATGATAGATGGGGAAAGTCGGGCCATCTTTTTGGTTCTGGTCGT GATATGTCCATGGACAATGGCCCTCCAACTATGAATCACCGTGGTGCTCCAGGAGTTATG AGGAATCCACGAGGTGGGCTTATTAATGTAGGACCGGTTGCACCTCAAATGTCTCGAAGT GGCTCTGATGCAGATAGATGGCAGCAGAAGGGTATATTCCCATCTCCTGTTACACCCATG CAAGTAATGCACAAAGCAGAGAAAAAATATGTCGTTGGCAAAGTTTCTGACGAGGAAGAA GCTAAGCAGAGGCAACTGAAGGCAATACTTAACAAATTGACGCCACAGAATTTTGAAAAG CTTTTTGAAAAAGTTAAAGAGGTGAACATTGACAATGTGGCAACTCTTACTGGGGTCATT TCACAGATATTTGACAAAGCTTTGATGGAACCAACATTCTGTGAAATGTACGCTAATTTT TGTTTCCATTTGGCTGGTGCACTGCCAGATTTTAGTGAGGATAATGAAAAAATTACATTC AAGAGATTGCTTTTGAACAAATGTCAGGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGCT GAAGCAGACAAAACTGAGGAGGAAGGTGAGATTAAGCAAACTAAAGAGG

Peptide Sequence

PEP ID	Os07t0555200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:22114961:22120060:1 gene:Os07g0555200 transcript:Os07t0555200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rice tungro spherical virus (RTSV) resistance gene, RTSV resistance gene, eukaryotic translation initiation factor 4G description:Similar to Eukaryotic translation initiation factor 4g (Fragment). (Os07t0555200-01);Similar to Eukaryotic translation initiation factor 4g (Fragment). (Os07t0555200-02);Similar to predicted protein. (Os07t0555200-03);Similar to predicted protein. (Os07t0555200-04);Similar to predicted protein. (Os07t0555200-05)
Sequence	MSQRGDRGEGHARRPGRSSSFGGGHRGGGGVGGAGKGGGGSSGQPPLATNRSFRKSGNGH GGHQRAVSQPDTHGFQPAPAPTALQTPPLRPPAPQNAPAHVPVPAPRPQHHDPSGARAPT LPPSSENTANAPPLKGIPHAAPRAPSRISSTSTSQGAPKGGAYNLQFGSFPMNGGTGGST MQFPARTSSAPPNLDEQKRMQALPEGHKVVPSGLVPQAPKHQQQQQPLQQQKQQPQSQPP LQQTRKDVVSSNHSSKPINPHIPSQVKSSVHVSPSVPNVAPPRPPVQQIPGMPMSMPFHH QAPLQFGGHNPQIPPQGVVPSSLQMSMGLHGANAPQVAQQMYIPTIQHHHQLQPPTMMHQ AAGIPYGPAAHQLTQMSGMMNVGVAPQFTPQQPNKYVTGPTRKTTVKITHPDTHEELKLD KRMDSSGQRGLPSVQQQSQPVSTYGSPMGFYQQNSYNQSTMFYPTTSGVGQVPTVSQGPR FVSTQTVSYISPSMNTGPGSNKDNLAGSTTSGHSQVTGKPHPAGLHMEKSGVQTVTISAP PGKSDVNKLKPAEDVVSHRQKDNEAVSGVRKSGENESKASPITEKHPTPVSQPLQALAAN PETTAAASFVVNSVPGDDGKSKESIQRTGSFKDSNKNATKDTRNLSQEPQSASSAEDLKV HTSVKDVCCGVSLMESKGVNKESEQTNAASASPTEMLKAADASSIDRSSARSTSESTENV QEVGKSDVAIGDSEKSGITNKVSPDLTKDDISSGSTGNESHEVCTLDLAEQLPVGASNPD NLDTATSVTDQGQLLKEPSSSVSDENVIMDRSHQSAEKMSDLVDDTVASVASSETLPESI IQNANAKGNTSGNQETGSATSSNILNVLPVPHSVASEDPLKPESMLKDQSSSAPAASARP VSREKPSVEITRTKFTAVKKKKRREMLSKADAAGSSDLYNAYKGPEEKVDFIGASESLDS SSIADHELPDESSEKEVNMGEDEGKKKVELDDWEDAAEMSTPKLERSDSSNQTTEANGRK RYSRDFLLTLAQSCTNLPVGFQMIEYASVLFPNLAGKSYVVDHPSPGRGADRPASRGDRR GVVIEDDRWGKSGHLFGSGRDMSMDNGPPTMNHRGAPGVMRNPRGGLINVGPVAPQMSRS GSDADRWQQKGIFPSPVTPMQVMHKAEKKYVVGKVSDEEEAKQRQLKAILNKLTPQNFEK LFEKVKEVNIDNVATLTGVISQIFDKALMEPTFCEMYANFCFHLAGALPDFSEDNEKITF KRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKE

Transcript Sequence

Transcript ID	Os07t0555200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:22114961:22120060:1 gene:Os07g0555200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rice tungro spherical virus (RTSV) resistance gene, RTSV resistance gene, eukaryotic translation initiation factor 4G description:Similar to Eukaryotic translation initiation factor 4g (Fragment). (Os07t0555200-01);Similar to Eukaryotic translation initiation factor 4g (Fragment). (Os07t0555200-02);Similar to predicted protein. (Os07t0555200-03);Similar to predicted protein. (Os07t0555200-04);Similar to predicted protein. (Os07t0555200-05)
Sequence	GCTTCGCCCCCACTCTTCACTCCCCTCCCCACCCCCACCCATCAATTTCTTCGTCCGTCT CGTGTTAAGCCGCCCCTCCACTGGCGACAACCAAACCCTAGGCCGCCGCCGCCCCGGGAG GCCACCAGGGGGAGGAAAAAGGAAGAGGAGGAGATCGGAAGTGGGAGAGGGATTTATGTC CCAGCGAGGGGACAGGGGCGAGGGGCACGCGAGGAGACCCGGCCGGTCCAGCAGCTTCGG CGGCGGCCACCGCGGAGGCGGAGGAGTCGGCGGCGCGGGCAAGGGCGGCGGGGGCTCCTC CGGCCAGCCTCCCCTCGCAACTAACCGCAGCTTCAGGAAGTCCGGCAATGGCCATGGCGG GCACCAGAGGGCTGTGAGCCAACCCGACACGCACGGCTTCCAGCCTGCACCTGCCCCGAC CGCTCTGCAGACGCCGCCGCTGCGCCCGCCGGCACCTCAGAATGCGCCGGCGCATGTCCC TGTTCCCGCACCACGTCCTCAGCACCATGATCCGTCTGGAGCGCGAGCACCCACCCTACC ACCTTCCAGCGAGAACACGGCCAATGCGCCACCACTGAAAGGTATTCCTCATGCCGCTCC AAGGGCACCATCAAGGATTTCAAGCACGTCCACTTCACAAGGAGCACCAAAAGGTGGAGC ATATAATCTTCAGTTTGGCAGTTTCCCAATGAATGGTGGAACTGGTGGTAGCACAATGCA ATTCCCTGCCAGGACAAGCTCAGCTCCTCCTAATTTGGATGAGCAAAAACGCATGCAGGC CCTCCCTGAAGGTCATAAGGTTGTACCTTCTGGGCTTGTTCCACAAGCTCCAAAACATCA GCAGCAACAGCAGCCGTTGCAGCAGCAGAAGCAACAGCCGCAGTCACAGCCACCACTGCA GCAAACAAGAAAGGATGTTGTTAGTTCTAATCATTCATCGAAACCTATCAACCCTCACAT TCCTTCCCAAGTTAAGAGCTCTGTGCATGTCTCACCATCCGTGCCCAATGTTGCACCACC AAGACCCCCTGTTCAGCAGATACCTGGGATGCCCATGTCAATGCCATTTCACCACCAGGC ACCCTTGCAGTTTGGCGGTCACAACCCACAAATTCCACCACAGGGAGTTGTGCCCAGTTC ACTACAAATGTCTATGGGATTGCATGGCGCCAACGCACCCCAGGTTGCACAGCAAATGTA CATCCCTACCATTCAGCACCATCATCAACTGCAACCGCCAACAATGATGCATCAAGCAGC AGGTATACCTTATGGTCCAGCTGCTCATCAACTCACTCAGATGAGTGGTATGATGAATGT GGGGGTGGCACCTCAGTTTACTCCACAACAGCCAAATAAGTATGTTACAGGCCCAACTCG GAAGACCACAGTCAAAATTACTCATCCAGATACTCATGAAGAATTGAAGCTCGATAAGAG GATGGACTCTTCTGGGCAAAGGGGTTTACCTAGTGTACAACAACAATCCCAGCCGGTCAG TACTTATGGATCTCCTATGGGCTTCTACCAGCAAAATTCGTATAACCAGTCAACTATGTT TTACCCCACAACCTCTGGTGTCGGTCAGGTTCCCACTGTATCACAGGGTCCTAGGTTTGT ATCCACACAAACAGTTTCATACATCAGCCCATCGATGAACACAGGTCCTGGCAGTAACAA GGACAACCTAGCAGGGTCTACAACATCTGGACACTCCCAAGTCACAGGCAAACCACACCC AGCTGGTTTGCACATGGAGAAATCCGGGGTACAAACGGTCACGATAAGTGCGCCGCCTGG TAAATCAGATGTGAACAAGTTAAAACCAGCTGAAGATGTTGTATCACATCGACAAAAGGA TAATGAAGCTGTTTCTGGGGTCCGTAAATCAGGTGAAAATGAGAGCAAAGCTTCACCGAT CACGGAGAAGCATCCCACACCAGTGAGCCAACCCTTACAAGCTCTAGCTGCAAATCCAGA AACTACAGCAGCTGCATCTTTTGTTGTGAATTCTGTTCCTGGAGATGATGGAAAAAGCAA AGAATCTATTCAAAGAACTGGATCATTTAAGGATAGCAATAAGAACGCCACTAAGGACAC CAGGAATTTATCACAAGAACCACAGTCAGCTTCATCTGCTGAAGATTTAAAGGTGCATAC TTCTGTAAAGGATGTATGTTGTGGTGTTAGTCTCATGGAATCCAAGGGTGTGAATAAAGA GTCTGAACAGACCAATGCAGCTTCCGCTTCACCGACTGAAATGTTAAAAGCTGCTGATGC TTCTAGCATTGATAGGAGCTCTGCAAGATCGACCTCTGAGAGCACTGAGAATGTTCAAGA AGTAGGAAAATCTGATGTTGCTATTGGTGATTCTGAGAAAAGTGGAATAACTAACAAAGT TTCACCAGATCTTACAAAGGATGATATTTCTTCTGGTTCAACTGGGAATGAATCACATGA AGTTTGCACGCTAGATTTGGCGGAGCAATTACCTGTGGGAGCTTCTAATCCTGATAATTT AGATACTGCAACTTCTGTAACTGACCAGGGACAGCTTCTCAAAGAACCCAGCTCATCAGT ATCTGATGAGAATGTTATTATGGACAGATCGCATCAGAGTGCTGAAAAAATGTCAGATTT GGTTGATGACACTGTTGCTTCTGTTGCCAGTTCTGAAACTTTGCCAGAATCTATAATTCA AAATGCCAATGCTAAAGGTAACACAAGTGGTAATCAGGAAACAGGGTCTGCTACATCTAG CAATATTCTTAATGTGTTGCCGGTACCTCATTCAGTGGCATCAGAGGATCCACTGAAACC AGAAAGTATGTTAAAGGATCAATCGAGTAGTGCACCAGCAGCCTCTGCTCGACCAGTTTC AAGGGAAAAACCTAGCGTGGAAATTACCAGAACAAAGTTTACAGCTGTGAAAAAGAAGAA AAGAAGAGAAATGCTTTCAAAAGCTGATGCTGCCGGGAGCTCAGATCTTTATAATGCATA CAAGGGACCTGAGGAAAAAGTAGATTTCATTGGTGCCTCAGAGAGTCTTGATAGTTCTTC AATTGCTGATCATGAGCTACCAGACGAGTCCTCCGAAAAGGAGGTTAATATGGGTGAGGA CGAGGGAAAGAAAAAGGTTGAGCTTGATGATTGGGAAGACGCTGCAGAAATGTCTACTCC AAAGTTGGAGAGGTCTGATTCCAGCAATCAAACAACCGAAGCTAATGGGAGGAAGAGATA TTCACGCGATTTTTTGCTAACTTTAGCACAGAGTTGTACTAATCTTCCTGTTGGTTTCCA GATGATTGAGTACGCCAGCGTTCTGTTCCCTAATTTGGCCGGAAAGTCTTATGTTGTTGA TCACCCAAGTCCTGGAAGGGGAGCTGACAGGCCAGCATCTCGTGGTGATCGCCGTGGTGT TGTCATTGAGGATGATAGATGGGGAAAGTCGGGCCATCTTTTTGGTTCTGGTCGTGATAT GTCCATGGACAATGGCCCTCCAACTATGAATCACCGTGGTGCTCCAGGAGTTATGAGGAA TCCACGAGGTGGGCTTATTAATGTAGGACCGGTTGCACCTCAAATGTCTCGAAGTGGCTC TGATGCAGATAGATGGCAGCAGAAGGGTATATTCCCATCTCCTGTTACACCCATGCAAGT AATGCACAAAGCAGAGAAAAAATATGTCGTTGGCAAAGTTTCTGACGAGGAAGAAGCTAA GCAGAGGCAACTGAAGGCAATACTTAACAAATTGACGCCACAGAATTTTGAAAAGCTTTT TGAAAAAGTTAAAGAGGTGAACATTGACAATGTGGCAACTCTTACTGGGGTCATTTCACA GATATTTGACAAAGCTTTGATGGAACCAACATTCTGTGAAATGTACGCTAATTTTTGTTT CCATTTGGCTGGTGCACTGCCAGATTTTAGTGAGGATAATGAAAAAATTACATTCAAGAG ATTGCTTTTGAACAAATGTCAGGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGCTGAAGC AGACAAAACTGAGGAGGAAGGTGAGATTAAGCAAACTAAAGAGG