Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0555100-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:22110826:22113674:1 gene:Os07g0555100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0555100-01)
Sequence

ATGGCCTCGCCGTCGCCGTCGCCGTCGCCATCGAGCGCCAGCAATCAGCGCCGCTCCCTG
CCGCCCTCACCAGCGGCGGCCTCCTCGGTGGGATCCTCGCCCGCATTCCCACCCCGCAAG
AGGCGCCGGTCGGGGCGCCCGCCTCCCTTCCTCGGGTTGGCCTGCTACGACGGCTTCTAC
CCGGCCACGGAGCCCCACCCTTCCGCCGAGCGCGCCATCGCCCTCGCTCGCAAGGCCGAT
TTCGAGTACGGCTTCGTGCCGTGGGTGCCGGAGGAGGAGGCCTGGGGCTGGTTCCCCCTC
GACGCCCGCGACGGCCGCGTCCTCATCCAGTCCAAGTACTTCCCCGATGACCCCGACGGC
GGCGACTTCCCCCGCCCCCGCTTCATGAACTACGCCGTGTGCGATCCCCTGTTCAAGAGA
TACGTGATGCTCCCACCCGTACCCGACGACCTAACCGCCAATGAGGGGAGCCTTGTTGAT
TTCGGGCTCTGCCTTGCCCCCTCCCAAGAGGATGAGGCGGATACATCGTTCAGGGTGATA
TGCGTGGCACGGTACAACACCAATCTGGTCGCGTTCGTCTTCTCTTCCGTCACTAGGCAA
TGGGGAATCGGTTCGTCTTCCACCTGGAGTTCTTTGGGCACAGAAGAGCCCCCTAACCGC
CATGGCCTGAGTTGCTTCGACTGTGTTGATGGCTGCTTCTACTGGACAGTGCCTTCGGCG
GACAAGATTCTTGTGCTTGATGCCATCAAGATGGAGTTCTCTGTTATCAACTATGCTCAT
CGTGTGGAGGACGGCTTTCGGGCTTGCATTGCAGTTGATACAGAAGGAACCCCTGGGATG
CTGACTGTTGGTGAATACTTGGGGAATAGAGAGTTTCGCTTCTCTCGCATCGCGAAACAA
AGTGACCGTGAATCTCCCAATGAACGCCTGTCGGAGAATATTATACAATTGCCCAGCAAC
TGCAATAAGTACTTCACCTTAGGTGCAGCTGAGGGATTTATTTTCCTTAGAGGCATTCCA
GAAGAAGAGAAAGTAGAAGACTCTTCATCAGAGGATCTTTACATGGATCCTGAAGAAATA
GAATATTATTCGCTCAATGTCAAGACTGTTGAATTTGAGATGGTCTGCGCGATGGACATG
GACAAGTGCTACTTTCATGTTTGCCCGTACTTCCGCTTTTCACCACCATCGGCAAAACCA
TGTGTTTGA

Peptide Sequence

PEP ID

Os07t0555100-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:22110826:22113674:1 gene:Os07g0555100 transcript:Os07t0555100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0555100-01)
Sequence

MASPSPSPSPSSASNQRRSLPPSPAAASSVGSSPAFPPRKRRRSGRPPPFLGLACYDGFY
PATEPHPSAERAIALARKADFEYGFVPWVPEEEAWGWFPLDARDGRVLIQSKYFPDDPDG
GDFPRPRFMNYAVCDPLFKRYVMLPPVPDDLTANEGSLVDFGLCLAPSQEDEADTSFRVI
CVARYNTNLVAFVFSSVTRQWGIGSSSTWSSLGTEEPPNRHGLSCFDCVDGCFYWTVPSA
DKILVLDAIKMEFSVINYAHRVEDGFRACIAVDTEGTPGMLTVGEYLGNREFRFSRIAKQ
SDRESPNERLSENIIQLPSNCNKYFTLGAAEGFIFLRGIPEEEKVEDSSSEDLYMDPEEI
EYYSLNVKTVEFEMVCAMDMDKCYFHVCPYFRFSPPSAKPCV

Transcript Sequence

Transcript ID

Os07t0555100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:22110826:22113674:1 gene:Os07g0555100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os07t0555100-01)
Sequence

AAAACCCCAAGAAACCCCCCATCGATCCCCTTCCATCATCAACCTCCGGCGATTCGCCTG
CCATGGCCTCGCCGTCGCCGTCGCCGTCGCCATCGAGCGCCAGCAATCAGCGCCGCTCCC
TGCCGCCCTCACCAGCGGCGGCCTCCTCGGTGGGATCCTCGCCCGCATTCCCACCCCGCA
AGAGGCGCCGGTCGGGGCGCCCGCCTCCCTTCCTCGGGTTGGCCTGCTACGACGGCTTCT
ACCCGGCCACGGAGCCCCACCCTTCCGCCGAGCGCGCCATCGCCCTCGCTCGCAAGGCCG
ATTTCGAGTACGGCTTCGTGCCGTGGGTGCCGGAGGAGGAGGCCTGGGGCTGGTTCCCCC
TCGACGCCCGCGACGGCCGCGTCCTCATCCAGTCCAAGTACTTCCCCGATGACCCCGACG
GCGGCGACTTCCCCCGCCCCCGCTTCATGAACTACGCCGTGTGCGATCCCCTGTTCAAGA
GATACGTGATGCTCCCACCCGTACCCGACGACCTAACCGCCAATGAGGGGAGCCTTGTTG
ATTTCGGGCTCTGCCTTGCCCCCTCCCAAGAGGATGAGGCGGATACATCGTTCAGGGTGA
TATGCGTGGCACGGTACAACACCAATCTGGTCGCGTTCGTCTTCTCTTCCGTCACTAGGC
AATGGGGAATCGGTTCGTCTTCCACCTGGAGTTCTTTGGGCACAGAAGAGCCCCCTAACC
GCCATGGCCTGAGTTGCTTCGACTGTGTTGATGGCTGCTTCTACTGGACAGTGCCTTCGG
CGGACAAGATTCTTGTGCTTGATGCCATCAAGATGGAGTTCTCTGTTATCAACTATGCTC
ATCGTGTGGAGGACGGCTTTCGGGCTTGCATTGCAGTTGATACAGAAGGAACCCCTGGGA
TGCTGACTGTTGGTGAATACTTGGGGAATAGAGAGTTTCGCTTCTCTCGCATCGCGAAAC
AAAGTGACCGTGAATCTCCCAATGAACGCCTGTCGGAGAATATTATACAATTGCCCAGCA
ACTGCAATAAGTACTTCACCTTAGGTGCAGCTGAGGGATTTATTTTCCTTAGAGGCATTC
CAGAAGAAGAGAAAGTAGAAGACTCTTCATCAGAGGATCTTTACATGGATCCTGAAGAAA
TAGAATATTATTCGCTCAATGTCAAGACTGTTGAATTTGAGATGGTCTGCGCGATGGACA
TGGACAAGTGCTACTTTCATGTTTGCCCGTACTTCCGCTTTTCACCACCATCGGCAAAAC
CATGTGTTTGAAGTGGGATGAAGCCGTGCTTTTGAGCCCATACTCGTGCCATGCATCCGT
ACTGCTTGGAAGTGCAGGAGGTTCAAAATGGTGCTGCCATTCTGTTGACCCGGATGTTCT
TGAGCCTTGGGTTATATTTATCACAAAGTAGTCACTAATGTAGTTTAATAGACCGTATTA
AGTTAATGTAAGCAAGACTTGCTGCTGGCAACCTTATTCTCGAACAGTAATCTGTTAGTG
GCTTAGTGCCGTACTGTTATTCTGTGCTGGACTTCATC