Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0554100-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:22064503:22067677:1 gene:Os07g0554100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 387 description:Conserved hypothetical protein. (Os07t0554100-00)
Sequence

GGAGCCGCCGCCGCCGTCGCCCTGCGAGGTTACGACGCCATCTCGCGCCGCCGCTCCCTG
CCGTCGCCTGCCCGCGCCGCCACTGCGCTGTCTCTTGCTTGGGACCTCGTCCGCGCCTCC
GCGGCATGCGTCTCCTTCCGCCGTCTCGTCACCACCGACCGCTCCTTCCTCCGCCGCTTC
CGCTCCCTCCACGCCCCGCCCTTCGTCGGCTTCCTCGACCACAGGGGCTTCCACCCGGCG
CTCCCTCCCCACCCCTCCGCTCCCGTCGCCAGGGCGGTGGCCGACGCCGCGGACTTCGCC
CTCTCCTTCCTCCCCTCCCCAGCCGGCAGCTGGATGGTCCGCGACGTCCGCGGCGGCCGC
GTCCTCGTCGACCGAGATACCAAGGCCGAGACCGGAGGCAGCGAGAAGCCGTTGGTCTTC
ACGGAGATCGCCGTGTGCGACCCCCTGCGCCGGCGATTCCTCCTCCTTCCCCCGATCCCC
GACGACCTCGCCGCTTCGGTGGACCGCCCTGTCCGCGTCCACCTGGACCGCTGGTGCGAG
CCCTTCCTCGCTCCCCACATCGAAGAGGAGGAGGACGATACCTCATTCAAGGTGATCTGG
ATGGCGCAGTGCAAGGCCAAGATTATCGCCTTCGTCTTCAATTCGAGCACCGGTCAATGG
CTAGCCGGTGCCTCCCCGAGCACCACCGATCTGTTCAATGGCGCCGGTCTGTCGCCGCCG
CCGTCGTCGTCGTCACCGAGCCTAGTGTTTTCGTCACCGGGTCGAGTGTTCTCCAGCCGC
CGATACGCGTGCGGCTGCTTCTGCTGGGGGATTTTGAGGACCATGTTGCTGGTGCTCGAC
ACACGACTGATGAAATTCTCCATTGCTGAACCCCCACCAGTCTGCCTTGGGGGACCGACC
GCCATTGTTGAGGCAGGGGAAGGCATGACTGGGATCTTTGCTCTCCGGGGGAGCGTTGGT
GGCACGTTTGATCTCCACTACAGCATTTGGGGAAAAGAAGGGGCGACTCGTCGCGAGCAG
ATGGAGAAGATAATCCCACTGGATCATGGCTACCGGTATTACATTAGAGGTGCGATGGAG
AAGCACTTGCTGTTAGCCAGGTCGCGAGGGGAAGGCGAAGAAGATACACCAGAGGAGCCA
GATTTGGAATGCTTTTCACTGGATGTCAAGACCTTGCAGCTTGAGCCGGTGTGTGTTCTG
AAGTACTACAGTTTACGTACTGACATATATACCAACTTCCCGCCTTCGTTGTCGCCAGAA
ATAATATGA

Peptide Sequence

PEP ID

Os07t0554100-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:22064503:22067677:1 gene:Os07g0554100 transcript:Os07t0554100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 387 description:Conserved hypothetical protein. (Os07t0554100-00)
Sequence

GAAAAVALRGYDAISRRRSLPSPARAATALSLAWDLVRASAACVSFRRLVTTDRSFLRRF
RSLHAPPFVGFLDHRGFHPALPPHPSAPVARAVADAADFALSFLPSPAGSWMVRDVRGGR
VLVDRDTKAETGGSEKPLVFTEIAVCDPLRRRFLLLPPIPDDLAASVDRPVRVHLDRWCE
PFLAPHIEEEEDDTSFKVIWMAQCKAKIIAFVFNSSTGQWLAGASPSTTDLFNGAGLSPP
PSSSSPSLVFSSPGRVFSSRRYACGCFCWGILRTMLLVLDTRLMKFSIAEPPPVCLGGPT
AIVEAGEGMTGIFALRGSVGGTFDLHYSIWGKEGATRREQMEKIIPLDHGYRYYIRGAME
KHLLLARSRGEGEEDTPEEPDLECFSLDVKTLQLEPVCVLKYYSLRTDIYTNFPPSLSPE
II

Transcript Sequence

Transcript ID

Os07t0554100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:22064503:22067677:1 gene:Os07g0554100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 387 description:Conserved hypothetical protein. (Os07t0554100-00)
Sequence

CTGCTGCCGCCGGCTCGTCGCCCTCGGTCGCTGTCACCGGCTCGTCATTGTCGCCCTGAG
CCGCCGTCGCCGGCTCACCGCCCTCGTCATCGAGGCCCTAAGCTGTCACCGCCGCCATCG
TGGCCCTGAGGAGCCGCCGCCGCCGTCGCCCTGCGAGGTTACGACGCCATCTCGCGCCGC
CGCTCCCTGCCGTCGCCTGCCCGCGCCGCCACTGCGCTGTCTCTTGCTTGGGACCTCGTC
CGCGCCTCCGCGGCATGCGTCTCCTTCCGCCGTCTCGTCACCACCGACCGCTCCTTCCTC
CGCCGCTTCCGCTCCCTCCACGCCCCGCCCTTCGTCGGCTTCCTCGACCACAGGGGCTTC
CACCCGGCGCTCCCTCCCCACCCCTCCGCTCCCGTCGCCAGGGCGGTGGCCGACGCCGCG
GACTTCGCCCTCTCCTTCCTCCCCTCCCCAGCCGGCAGCTGGATGGTCCGCGACGTCCGC
GGCGGCCGCGTCCTCGTCGACCGAGATACCAAGGCCGAGACCGGAGGCAGCGAGAAGCCG
TTGGTCTTCACGGAGATCGCCGTGTGCGACCCCCTGCGCCGGCGATTCCTCCTCCTTCCC
CCGATCCCCGACGACCTCGCCGCTTCGGTGGACCGCCCTGTCCGCGTCCACCTGGACCGC
TGGTGCGAGCCCTTCCTCGCTCCCCACATCGAAGAGGAGGAGGACGATACCTCATTCAAG
GTGATCTGGATGGCGCAGTGCAAGGCCAAGATTATCGCCTTCGTCTTCAATTCGAGCACC
GGTCAATGGCTAGCCGGTGCCTCCCCGAGCACCACCGATCTGTTCAATGGCGCCGGTCTG
TCGCCGCCGCCGTCGTCGTCGTCACCGAGCCTAGTGTTTTCGTCACCGGGTCGAGTGTTC
TCCAGCCGCCGATACGCGTGCGGCTGCTTCTGCTGGGGGATTTTGAGGACCATGTTGCTG
GTGCTCGACACACGACTGATGAAATTCTCCATTGCTGAACCCCCACCAGTCTGCCTTGGG
GGACCGACCGCCATTGTTGAGGCAGGGGAAGGCATGACTGGGATCTTTGCTCTCCGGGGG
AGCGTTGGTGGCACGTTTGATCTCCACTACAGCATTTGGGGAAAAGAAGGGGCGACTCGT
CGCGAGCAGATGGAGAAGATAATCCCACTGGATCATGGCTACCGGTATTACATTAGAGGT
GCGATGGAGAAGCACTTGCTGTTAGCCAGGTCGCGAGGGGAAGGCGAAGAAGATACACCA
GAGGAGCCAGATTTGGAATGCTTTTCACTGGATGTCAAGACCTTGCAGCTTGAGCCGGTG
TGTGTTCTGAAGTACTACAGTTTACGTACTGACATATATACCAACTTCCCGCCTTCGTTG
TCGCCAGAAATAATATGA