Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0552800-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:21970365:21973380:1 gene:Os07g0552800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE F2 description:Cellulose synthase family protein. (Os07t0552800-01);Similar to Mixed-linked glucan synthase 2. (Os07t0552800-02)
Sequence	ATGGCGGCCACCGCGGCTTCCACGATGTCCGCAGCGGCGGCAGTGACTCGCCGGATCAAC GCTGCCCTCCGCGTGGACGCCACCAGCGGTGACGTCGCGGCCGGCGCCGACGGGCAGAAC GGGCGCCGGTCGCCCGTGGCCAAGCGGGTGAACGACGGCGGTGGCGGCAAGGATGACGTG TGGGTGGCCGTCGACGAAAAGGACGTGTGCGGGGCCCGCGGCGGCGATGGCGCCGCCCGG CCGCCGCTGTTCCGGACGTACAAGGTCAAGGGCAGCATCCTTCATCCTTACAGGTTCCTG ATCCTTCTTCGACTGATCGCCATCGTCGCCTTCTTCGCGTGGCGCGTACGTCACAAGAAC CGCGACGGCGTGTGGCTGTGGACAATGTCCATGGTCGGCGACGTCTGGTTCGGCTTCTCG TGGGTGCTCAACCAGCTCCCGAAGCTGAGCCCCATCAAGCGCGTCCCGGACCTCGCCGCC CTCGCCGACCGGCACTCCGGCGACCTACCCGGCGTCGACGTCTTCGTCACCACCGTCGAC CCCGTCGACGAGCCGATACTCTACACCGTGAACACCATCCTCTCCATCCTCGCCGCCGAC TACCCGGTGGACAGGTACGCCTGCTACCTGTCCGACGACGGCGGGACGCTGGTCCACTAC GAGGCCATGGTGGAGGTCGCCAAGTTCGCCGAGCTGTGGGTGCCCTTCTGCCGGAAGCAC TGCGTCGAGCCGAGGTCGCCGGAGAACTACTTCGCGATGAAGACGCAGGCGTACAAAGGC GGCGTCCCCGGCGAGCTGATGAGCGATCACCGGCGTGTGCGGCGAGAGTACGAGGAGTTC AAGGTCAGGATCGACTCCCTCTCGAGCACCATTCGCCAGCGATCAGATGTGTACAACGCC AAACATGCCGGCGAAAATGCGACATGGATGGCTGATGGCACACATTGGCCCGGCACATGG TTTGAGCCGGCTGACAACCACCAGAGAGGGAAACATGCTGGAATTGTTCAGGTTTTACTG AACCATCCAAGCTGTAAACCGAGGCTTGGATTGGCGGCGAGTGCTGAGAATCCGGTTGAT TTCAGCGGTGTCGACGTGCGGCTCCCCATGCTGGTGTACATCTCGCGCGAGAAGAGGCCC GGATACAACCACCAGAAGAAGGCCGGCGCCATGAACGTGATGCTCCGCGTGTCCGCGCTG CTGTCGAACGCGCCGTTCGTCATCAACTTCGACGGCGACCACTACGTCAACAACTCGCAG GCGTTCAGGGCGCCGATGTGCTTCATGCTCGACGGCCGCGGCCGCGGCGGCGAGAACACG GCGTTCGTCCAGTTCCCGCAGCGGTTCGACGACGTTGACCCGACGGACCGGTACGCGAAC CATAACCGCGTCTTCTTCGACGGCACCATGCTCTCCCTCAACGGCCTCCAGGGGCCCTCC TACCTCGGCACCGGCACCATGTTCCGCCGCGTCGCGCTCTACGGCGTGGAGCCGCCGCGC TGGGGAGCGGCGGCGAGCCAGATCAAGGCTATGGACATCGCCAACAAGTTCGGCAGCTCG ACGTCGTTCGTCGGCACGATGCTGGACGGCGCCAACCAAGAACGGTCGATCACGCCGCTG GCGGTGCTCGACGAGTCGGTCGCTGGCGATCTCGCCGCCCTGACGGCGTGCGCATACGAG GATGGGACGTCGTGGGGGAGAGACGTCGGGTGGGTGTACAACATCGCGACGGAGGACGTG GTGACCGGGTTCCGCATGCACCGGCAGGGGTGGCGCTCCGTGTACGCCTCAGTGGAGCCC GCCGCGTTCCGCGGCACGGCGCCGATCAACCTCACCGAGCGCCTCTACCAGATCCTCCGG TGGTCGGGCGGCTCGCTGGAGATGTTCTTCTCCCACAGCAACGCGCTCCTCGCCGGCCGC CGCCTCCACCCGCTGCAGCGCGTCGCCTACCTCAACATGTCGACCTACCCGATCGTGACC GTGTTCATCTTCTTCTACAACCTCTTCCCGGTGATGTGGCTCATCTCCGAGCAGTACTAC ATCCAGCGGCCGTTCGGCGAGTACCTCCTCTACCTCGTCGCCGTCATCGCCATGATCCAC GTGATCGGCATGTTCGAGGTGAAGTGGGCTGGCATCACGCTGCTCGACTGGTGCCGCAAC GAGCAGTTCTACATGATCGGCTCCACGGGGGTGTACCCGACGGCGGTGCTGTACATGGCG CTCAAGCTCGTCACCGGGAAGGGCATCTACTTCCGGCTCACGTCGAAGCAGACGACGGCC AGCTCCGGCGACAAGTTCGCCGACCTGTACACCGTGCGGTGGGTGCCGCTGCTGATACCG ACCATCGTCATCATTGTCGTGAACGTCGCCGCCGTCGGGGTGGCGGTCGGCAAGGCGGCG GCGTGGGGGCCGCTCACCGAGCCGGGGTGGCTCGCCGTGCTCGGGATGGTGTTCAACGTG TGGATCCTGGTGCTCCTCTACCCGTTCGCGCTCGGGGTCATGGGTCAATGGGGGAAGCGG CCGGCCGTGCTGTTCGTGGCGATGGCGATGGCCGTCGCCGCCGTGGCGGCCATGTACGTC GCCTTCGGTGCACCGTACCAAGCTGAGTTGTCAGGTGGTGCTGCTTCTCTCGGAAAAGCG GCGGCGTCGCTGACCGGGCCATCCGGGTAG

Peptide Sequence

PEP ID	Os07t0552800-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:21970365:21973380:1 gene:Os07g0552800 transcript:Os07t0552800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE F2 description:Cellulose synthase family protein. (Os07t0552800-01);Similar to Mixed-linked glucan synthase 2. (Os07t0552800-02)
Sequence	MAATAASTMSAAAAVTRRINAALRVDATSGDVAAGADGQNGRRSPVAKRVNDGGGGKDDV WVAVDEKDVCGARGGDGAARPPLFRTYKVKGSILHPYRFLILLRLIAIVAFFAWRVRHKN RDGVWLWTMSMVGDVWFGFSWVLNQLPKLSPIKRVPDLAALADRHSGDLPGVDVFVTTVD PVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKH CVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRIDSLSSTIRQRSDVYNA KHAGENATWMADGTHWPGTWFEPADNHQRGKHAGIVQVLLNHPSCKPRLGLAASAENPVD FSGVDVRLPMLVYISREKRPGYNHQKKAGAMNVMLRVSALLSNAPFVINFDGDHYVNNSQ AFRAPMCFMLDGRGRGGENTAFVQFPQRFDDVDPTDRYANHNRVFFDGTMLSLNGLQGPS YLGTGTMFRRVALYGVEPPRWGAAASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPL AVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEP AAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALLAGRRLHPLQRVAYLNMSTYPIVT VFIFFYNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRN EQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTTASSGDKFADLYTVRWVPLLIP TIVIIVVNVAAVGVAVGKAAAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKR PAVLFVAMAMAVAAVAAMYVAFGAPYQAELSGGAASLGKAAASLTGPSG

Transcript Sequence

Transcript ID	Os07t0552800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21970365:21973380:1 gene:Os07g0552800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE F2 description:Cellulose synthase family protein. (Os07t0552800-01);Similar to Mixed-linked glucan synthase 2. (Os07t0552800-02)
Sequence	CAAGGAGGAGCCACGGACAAGGAGGAGCTAGCTAGTGAAATAGGTGTGTTCCGTGCATGG CGGCCACCGCGGCTTCCACGATGTCCGCAGCGGCGGCAGTGACTCGCCGGATCAACGCTG CCCTCCGCGTGGACGCCACCAGCGGTGACGTCGCGGCCGGCGCCGACGGGCAGAACGGGC GCCGGTCGCCCGTGGCCAAGCGGGTGAACGACGGCGGTGGCGGCAAGGATGACGTGTGGG TGGCCGTCGACGAAAAGGACGTGTGCGGGGCCCGCGGCGGCGATGGCGCCGCCCGGCCGC CGCTGTTCCGGACGTACAAGGTCAAGGGCAGCATCCTTCATCCTTACAGGTTCCTGATCC TTCTTCGACTGATCGCCATCGTCGCCTTCTTCGCGTGGCGCGTACGTCACAAGAACCGCG ACGGCGTGTGGCTGTGGACAATGTCCATGGTCGGCGACGTCTGGTTCGGCTTCTCGTGGG TGCTCAACCAGCTCCCGAAGCTGAGCCCCATCAAGCGCGTCCCGGACCTCGCCGCCCTCG CCGACCGGCACTCCGGCGACCTACCCGGCGTCGACGTCTTCGTCACCACCGTCGACCCCG TCGACGAGCCGATACTCTACACCGTGAACACCATCCTCTCCATCCTCGCCGCCGACTACC CGGTGGACAGGTACGCCTGCTACCTGTCCGACGACGGCGGGACGCTGGTCCACTACGAGG CCATGGTGGAGGTCGCCAAGTTCGCCGAGCTGTGGGTGCCCTTCTGCCGGAAGCACTGCG TCGAGCCGAGGTCGCCGGAGAACTACTTCGCGATGAAGACGCAGGCGTACAAAGGCGGCG TCCCCGGCGAGCTGATGAGCGATCACCGGCGTGTGCGGCGAGAGTACGAGGAGTTCAAGG TCAGGATCGACTCCCTCTCGAGCACCATTCGCCAGCGATCAGATGTGTACAACGCCAAAC ATGCCGGCGAAAATGCGACATGGATGGCTGATGGCACACATTGGCCCGGCACATGGTTTG AGCCGGCTGACAACCACCAGAGAGGGAAACATGCTGGAATTGTTCAGGTTTTACTGAACC ATCCAAGCTGTAAACCGAGGCTTGGATTGGCGGCGAGTGCTGAGAATCCGGTTGATTTCA GCGGTGTCGACGTGCGGCTCCCCATGCTGGTGTACATCTCGCGCGAGAAGAGGCCCGGAT ACAACCACCAGAAGAAGGCCGGCGCCATGAACGTGATGCTCCGCGTGTCCGCGCTGCTGT CGAACGCGCCGTTCGTCATCAACTTCGACGGCGACCACTACGTCAACAACTCGCAGGCGT TCAGGGCGCCGATGTGCTTCATGCTCGACGGCCGCGGCCGCGGCGGCGAGAACACGGCGT TCGTCCAGTTCCCGCAGCGGTTCGACGACGTTGACCCGACGGACCGGTACGCGAACCATA ACCGCGTCTTCTTCGACGGCACCATGCTCTCCCTCAACGGCCTCCAGGGGCCCTCCTACC TCGGCACCGGCACCATGTTCCGCCGCGTCGCGCTCTACGGCGTGGAGCCGCCGCGCTGGG GAGCGGCGGCGAGCCAGATCAAGGCTATGGACATCGCCAACAAGTTCGGCAGCTCGACGT CGTTCGTCGGCACGATGCTGGACGGCGCCAACCAAGAACGGTCGATCACGCCGCTGGCGG TGCTCGACGAGTCGGTCGCTGGCGATCTCGCCGCCCTGACGGCGTGCGCATACGAGGATG GGACGTCGTGGGGGAGAGACGTCGGGTGGGTGTACAACATCGCGACGGAGGACGTGGTGA CCGGGTTCCGCATGCACCGGCAGGGGTGGCGCTCCGTGTACGCCTCAGTGGAGCCCGCCG CGTTCCGCGGCACGGCGCCGATCAACCTCACCGAGCGCCTCTACCAGATCCTCCGGTGGT CGGGCGGCTCGCTGGAGATGTTCTTCTCCCACAGCAACGCGCTCCTCGCCGGCCGCCGCC TCCACCCGCTGCAGCGCGTCGCCTACCTCAACATGTCGACCTACCCGATCGTGACCGTGT TCATCTTCTTCTACAACCTCTTCCCGGTGATGTGGCTCATCTCCGAGCAGTACTACATCC AGCGGCCGTTCGGCGAGTACCTCCTCTACCTCGTCGCCGTCATCGCCATGATCCACGTGA TCGGCATGTTCGAGGTGAAGTGGGCTGGCATCACGCTGCTCGACTGGTGCCGCAACGAGC AGTTCTACATGATCGGCTCCACGGGGGTGTACCCGACGGCGGTGCTGTACATGGCGCTCA AGCTCGTCACCGGGAAGGGCATCTACTTCCGGCTCACGTCGAAGCAGACGACGGCCAGCT CCGGCGACAAGTTCGCCGACCTGTACACCGTGCGGTGGGTGCCGCTGCTGATACCGACCA TCGTCATCATTGTCGTGAACGTCGCCGCCGTCGGGGTGGCGGTCGGCAAGGCGGCGGCGT GGGGGCCGCTCACCGAGCCGGGGTGGCTCGCCGTGCTCGGGATGGTGTTCAACGTGTGGA TCCTGGTGCTCCTCTACCCGTTCGCGCTCGGGGTCATGGGTCAATGGGGGAAGCGGCCGG CCGTGCTGTTCGTGGCGATGGCGATGGCCGTCGCCGCCGTGGCGGCCATGTACGTCGCCT TCGGTGCACCGTACCAAGCTGAGTTGTCAGGTGGTGCTGCTTCTCTCGGAAAAGCGGCGG CGTCGCTGACCGGGCCATCCGGGTAGGGACAGTTCGATCGCGTTTGATTTGATTTGAATA TTTGATTATTTTCTTGGTGCAATAATTGGTTGTTACTTCTGTTATGTCGTTACGTCATAG GAGCGGCTGACTATATTGCTAGTCTGCTCTATACGAGTGAGACTTGGATTGTTCTTCTTT AAAAATGACAAGATTTGAATTTCTCCAGCGTGATTTGTCGACTTT