Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0551400-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:21894865:21898610:-1 gene:Os07g0551400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os07t0551400-01);Similar to USP family protein. (Os07t0551400-02)
Sequence	ATGCAGAACCCGCCGAGCCACCCCGTTGACCTGCCGCTGGCGGCGGCGCCGCCGCCGGTG AAGGCGCCGACCCCGCGCCCCCCCACGCCGGCGTCGCTGCAGCCGGAGTCCCCGGGGGTG TTCTTCACGGCCGCCGCGGCGGCCGCCCCGGTCGGGTCCTCGCACCGCCGCATCGCCATC GCCGTTGACCTCTCCGACGAGTCCGCGTACGCCGTCCGCTGGGCCGTCGCCAACTACCTC CGCCCCGGGGACGCCGTTATACTGCTGCACGTCCGCCCCACCTCCGTGCTCTACGGCGCC GACTGGGGCTCCGTCGACCTCTCCCTCCCCGCCGCCAACCCTAACCCTAGCGGCGACCCG CCGTCGGCCGAGGACGACGCTGAGGCCGCGGCCCGCAAGATGGAGGACGACTTCGACGCC TTCACCGCGTCCAAGGCCGACGACCTGGCCAAGCCGCTCAAGGACGCCGGGATCCCCTAC AAGATCCACATCGTCAAGGATCACGACATGAAGGAGAGGCTCTGCCTCGAGGTGGAGAGG CTTGGGCTCAGCGCGGTCATCATGGGGAGCAAGGGCTTCGGCGCCTCCAGGCGGACCAGC AAGGGGAGGCTTGGAAGCGTCAGCGATTACTGCGTGCACCACTGTGTGTGCCCCGTGGTG GTGGTGCGTTTCCCCGACGATGGTGTGGCGGAGGGCGGAGAGGCCGGTGGCGCATCGGAG TTGGCGGTGGGCGAGGAAGTGCTGCACCCTGTGCCAGAGGAGGATGCCGAGTACCATGAC GCCACTGAAGAGCACAAGGATACTTGA

Peptide Sequence

PEP ID	Os07t0551400-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:21894865:21898610:-1 gene:Os07g0551400 transcript:Os07t0551400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os07t0551400-01);Similar to USP family protein. (Os07t0551400-02)
Sequence	MQNPPSHPVDLPLAAAPPPVKAPTPRPPTPASLQPESPGVFFTAAAAAAPVGSSHRRIAI AVDLSDESAYAVRWAVANYLRPGDAVILLHVRPTSVLYGADWGSVDLSLPAANPNPSGDP PSAEDDAEAAARKMEDDFDAFTASKADDLAKPLKDAGIPYKIHIVKDHDMKERLCLEVER LGLSAVIMGSKGFGASRRTSKGRLGSVSDYCVHHCVCPVVVVRFPDDGVAEGGEAGGASE LAVGEEVLHPVPEEDAEYHDATEEHKDT

Transcript Sequence

Transcript ID	Os07t0551400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21894865:21898610:-1 gene:Os07g0551400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os07t0551400-01);Similar to USP family protein. (Os07t0551400-02)
Sequence	AAAAAACCAAAGGAAACCAAAGCAAAGCGAGCTCCGAGCTCTCCACCCACGAGCGCGTGC GGAATCTGTAGTAAACTAGTAATCCATCCCCGATCGGCGGCGATGCAGAACCCGCCGAGC CACCCCGTTGACCTGCCGCTGGCGGCGGCGCCGCCGCCGGTGAAGGCGCCGACCCCGCGC CCCCCCACGCCGGCGTCGCTGCAGCCGGAGTCCCCGGGGGTGTTCTTCACGGCCGCCGCG GCGGCCGCCCCGGTCGGGTCCTCGCACCGCCGCATCGCCATCGCCGTTGACCTCTCCGAC GAGTCCGCGTACGCCGTCCGCTGGGCCGTCGCCAACTACCTCCGCCCCGGGGACGCCGTT ATACTGCTGCACGTCCGCCCCACCTCCGTGCTCTACGGCGCCGACTGGGGCTCCGTCGAC CTCTCCCTCCCCGCCGCCAACCCTAACCCTAGCGGCGACCCGCCGTCGGCCGAGGACGAC GCTGAGGCCGCGGCCCGCAAGATGGAGGACGACTTCGACGCCTTCACCGCGTCCAAGGCC GACGACCTGGCCAAGCCGCTCAAGGACGCCGGGATCCCCTACAAGATCCACATCGTCAAG GATCACGACATGAAGGAGAGGCTCTGCCTCGAGGTGGAGAGGCTTGGGCTCAGCGCGGTC ATCATGGGGAGCAAGGGCTTCGGCGCCTCCAGGCGGACCAGCAAGGGGAGGCTTGGAAGC GTCAGCGATTACTGCGTGCACCACTGTGTGTGCCCCGTGGTGGTGGTGCGTTTCCCCGAC GATGGTGTGGCGGAGGGCGGAGAGGCCGGTGGCGCATCGGAGTTGGCGGTGGGCGAGGAA GTGCTGCACCCTGTGCCAGAGGAGGATGCCGAGTACCATGACGCCACTGAAGAGCACAAG GATACTTGATCATGCTGTATGATGATGTCCTCTTTGATCCAGCATGTAAAGGTTCTAGCA GTCAACTGTTTGCTGGGTGCTAGGTGGGGTTTCTTCTGAGGGCATTTGCTGTTCCGTTCA ACTTTCACTGCCTATGTTTATTCGTGCTTTCACTTTGTTGTATTTTATTGTCTTGTTTCA TGTAGTTTTATCTGACCTACTGCTTGCACGGTTAATTTTTATGATTTAGAATTTTTGTGC TTTCTCAACATCACAAGATCTGTTTCTGATGAAAGTTACAGTTTGACTACTTAACGAACC AAGTAACCGTCTCCCTTTTATTTTTCTCCCTTGTTGTACTTTCCCTTAAAGTAAGATTAT GGTAGATATCATGAATCTCTTGATGTGCGCAGTCAATATCTGCCAAAGGAAACTTTTTTT TTTTAATCTACTGTTAGGAAAAGTTGGCGTT