Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0548900-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:21788575:21793862:-1 gene:Os07g0548900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0548900-01)
Sequence

ATGGTGACCGACGCCGCCGCGATGGCCGTCGTGAAGGCGGCGCGCCCGGCCTTCCGCGGC
GCCCACGACGGGGTCGCCTTCGCCGCCAACGCCGCGTTCCTCGCCGCCGGCTACTCCCTC
TGCGCCGTCGGCCCCGCCGCGCTCACCGACCCCCCGCCCTCAGGTGAAGAGGAGGTGGGG
ATTGATGGTTGGAACAGCATGGATAATTGTTATGCATTTTTGTACATCAAGGAGGAGAGG
GGCAAGAAGAAACGGGTATTGGTAAAATGTCTGGTGATCGGTGATGTCCTTGCCATTGAT
GTCCTGGATCTTGAGTCACAGAATAAAGGCCCTTATAATATCCAGATCAATGTGAAGGAT
TTCTTCTCCGAGGAGCAGCCAAAGAACTATGGGAACATGTACAAAAACTTTGCAGGCTTA
ATTGAGACCATGAACTCAAATGCATTGAGCAAATTGGATGAGAAGGATGCTGGTGCTGCC
AAGAACCCTGAGGTTGAGACTAGCTCATCAATACACAGATCTGAAAATCCAGGCCTGAGA
ACTACTGAACCTGGCTTGGTTTATCCTCCAATAGCTCCACTTGGTCATGATGATGCCTTC
CCTGGCCCTGGCGCAGGCTTCTATCCTCATAGTGGTATTGGTGGGGGTGGCAGCATGCAT
GTTGGTCCAAACGATCCACGCTTCTTTCCTTCTAATCCCTTCCCTGTGCCCTTTGGTGGC
CCTGGGAGTGTTCCACCAGGTGGTCGTTATGATCCAATTGGTCCACCAGATGTTCCAGGA
TTTGAACCTTCTCGCTTTGTGAGGCGTCCGAGGCCTCCAGCTGGGACTACTCACCCAGAC
CTTGAGTTCTTCCAGCCGGGGCCGCACGGGCCCTTCTGA

Peptide Sequence

PEP ID

Os07t0548900-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:21788575:21793862:-1 gene:Os07g0548900 transcript:Os07t0548900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0548900-01)
Sequence

MVTDAAAMAVVKAARPAFRGAHDGVAFAANAAFLAAGYSLCAVGPAALTDPPPSGEEEVG
IDGWNSMDNCYAFLYIKEERGKKKRVLVKCLVIGDVLAIDVLDLESQNKGPYNIQINVKD
FFSEEQPKNYGNMYKNFAGLIETMNSNALSKLDEKDAGAAKNPEVETSSSIHRSENPGLR
TTEPGLVYPPIAPLGHDDAFPGPGAGFYPHSGIGGGGSMHVGPNDPRFFPSNPFPVPFGG
PGSVPPGGRYDPIGPPDVPGFEPSRFVRRPRPPAGTTHPDLEFFQPGPHGPF

Transcript Sequence

Transcript ID

Os07t0548900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:21788575:21793862:-1 gene:Os07g0548900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0548900-01)
Sequence

GGAGCTGTGACTACAAAGATTTCTCTCGAAACCCCACGAACGCGACCACCGCCTCCCCTC
CCCCTTCCCTCGACCGCCGTGACGCCGCCCGCGAATCGCGCGATGGTGACCGACGCCGCC
GCGATGGCCGTCGTGAAGGCGGCGCGCCCGGCCTTCCGCGGCGCCCACGACGGGGTCGCC
TTCGCCGCCAACGCCGCGTTCCTCGCCGCCGGCTACTCCCTCTGCGCCGTCGGCCCCGCC
GCGCTCACCGACCCCCCGCCCTCAGGTGAAGAGGAGGTGGGGATTGATGGTTGGAACAGC
ATGGATAATTGTTATGCATTTTTGTACATCAAGGAGGAGAGGGGCAAGAAGAAACGGGTA
TTGGTAAAATGTCTGGTGATCGGTGATGTCCTTGCCATTGATGTCCTGGATCTTGAGTCA
CAGAATAAAGGCCCTTATAATATCCAGATCAATGTGAAGGATTTCTTCTCCGAGGAGCAG
CCAAAGAACTATGGGAACATGTACAAAAACTTTGCAGGCTTAATTGAGACCATGAACTCA
AATGCATTGAGCAAATTGGATGAGAAGGATGCTGGTGCTGCCAAGAACCCTGAGGTTGAG
ACTAGCTCATCAATACACAGATCTGAAAATCCAGGCCTGAGAACTACTGAACCTGGCTTG
GTTTATCCTCCAATAGCTCCACTTGGTCATGATGATGCCTTCCCTGGCCCTGGCGCAGGC
TTCTATCCTCATAGTGGTATTGGTGGGGGTGGCAGCATGCATGTTGGTCCAAACGATCCA
CGCTTCTTTCCTTCTAATCCCTTCCCTGTGCCCTTTGGTGGCCCTGGGAGTGTTCCACCA
GGTGGTCGTTATGATCCAATTGGTCCACCAGATGTTCCAGGATTTGAACCTTCTCGCTTT
GTGAGGCGTCCGAGGCCTCCAGCTGGGACTACTCACCCAGACCTTGAGTTCTTCCAGCCG
GGGCCGCACGGGCCCTTCTGAGATTCAGAGGCCCACCTCCTCCCCACCGTTTCTGAATAA
CCCTGCCTTGCTTCTCATGCTGATCCAAAGAGCAGTTTGTGAGATAGAACTGCTACAATT
GCGAATAGCCGTACCAGACTCTGCCTGTAAAAAATTGGATGCGAACTCCTGTATCTGTCC
TCAGTTGCAGTTTACCATATACTAGTAGTAGTATGCTATTGTATCAACCTATCTTTGTCA
CCCTTGCACACCTGTACTAATAGTGACCTGTGGGGTGGATTGCTGATGAAATGCAAACCC
TCCTGTGG