Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0546400-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:21654643:21657358:1 gene:Os07g0546400 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPH3 domain containing protein. (Os07t0546400-01)
Sequence	GAGGTTCTTGCACCGTTCTGTGGTAGGATCAAGAATTTGGGTGGCGGCGGCGCCGGCGGC GAGGGGGTGGTCGGAGCTGCGGCGGCGGCGAGGGTCGTGTTGCGTGGGTTCCCTGGCGGT GCTGAGGCATTCGAGCTCGTCGCGAGGTTCTGTTACACCGGCGGCGGCGGCGGCGGCGTC GCGGTGACCGCGTCGAACGCGTGCGCGCTGCGGTGCGCGGCTGAGTTCATGGACATGGCG GCGGCGGCGGCGGAGGTGTCGACACCGCCGAGCCTGGTGAAGATGACGGAGAAGGCTCTC GACGAGATGCCGCAGTGGTCGTGGCAGAGCGTGGTGGACGCCGTGAGGCAGTGCCAGCGG CTGCTGCCGACGGCGGACGCCACGGGGGTGTTCGACCGGGTCGTCGGCGCGCTGGTGTCC CACGTGGCCGTCTCCCCCGGGGACGCCACCCCGACGAGCTCCTCGCCGGAGAGCTCGGCG TTCCGGTTCTCGTGCGACACCAAGAGCAGCTGCCTCAGCGCGCGGTGCACCAGCCGCACC TGGTGGTTCGAGGACCTCGCCGTCGTCCTCGGCCCCGGCATGGTGGAGCGCGTCGCCGGG GCGCTCCTCGCCAGGGGCACCGACCACGGCGTCGTCTCCCGGTTCCTCTTCTACTACCTC AAGTGCCGCGTCGCCGGCGCCGCCACCGCCGACGACAAGAGGGCGATGCTCGAGGCGGCG ATCGCCGCCATGTCCGGCCTCGACCGGAGCTCGGTCTCCTGCAGGGGCCTCTTCGGCATC CTCCGCATCTCCTCACCGCTCAAGCTCCCCACCTCCTGCCACGACAGCCTCGTCGCCATG ATCGGCGCCAAGCTCGACCACGCGACGCTCGACAACCTGCTCGTCCCGGCGCCGCCCGGG ACGACGAGCAGCCTGTACGACGTCACCCTCGTCCTCCGCTTCCTGGACGCCTTCCTCCAC CACGCCGCCGCCACCGGCGCGCGCGGCGAGACGCCGAGGCTGAAGAAGGTGGGCAAGCTC GTCGACCTGTACCTCGCCGAGGTCGCCCCGGACCCGTCGCTGCGCCCGGCCATGTTCGTC GAGCTCGCCACGGCGCTGCCCGCCGCGGCGAGGGACTGCCACGACGCGCTTTACCGCGCC ATCGACGTCTACTTCCAGGTTCACACGCGGCTGACGGAGGAGGAGAAGATGAGGATCTGC AAGGGGATAAACTACGAGAAGCTCTCGCCGGAGTGCTGCAAGCACCTCGCCCGGAACGCC GGATTCCCGACGAGGGCGGCGGTGCAGGCGCTGGCGTCGCAGCACACGGTGCTCAAGAGC CTCCTCCGCGGCGGCGGCCCGGACGAACACCTGAGGCCGGTGTCCGCGGCGAAGCACCGC GCCGGCGGCGAGGACCACGACGACCTCGTCGCCGCCGGCGGCCAGGTCGTCCTGTACGCC GGGAGGCTCGACCTGTCGCTGGAGAGCCAGAATCTCAGGTCGCTCCTCGACGGGATGCAC TGGCGGGTGATGGAGCTCGAGAAGGTGTGCAGCCGGATGAAGACGCAGATGAGCAAGATG AAGGCGGCGAGGAGAGCCACCGGAGGCGGCGGCGGCGCCGCCGCCGGCCGCCGCGCTGCT TCAAGATCACTTCCCCGGATGTGTTCTTGA

Peptide Sequence

PEP ID	Os07t0546400-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:21654643:21657358:1 gene:Os07g0546400 transcript:Os07t0546400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPH3 domain containing protein. (Os07t0546400-01)
Sequence	EVLAPFCGRIKNLGGGGAGGEGVVGAAAAARVVLRGFPGGAEAFELVARFCYTGGGGGGV AVTASNACALRCAAEFMDMAAAAAEVSTPPSLVKMTEKALDEMPQWSWQSVVDAVRQCQR LLPTADATGVFDRVVGALVSHVAVSPGDATPTSSSPESSAFRFSCDTKSSCLSARCTSRT WWFEDLAVVLGPGMVERVAGALLARGTDHGVVSRFLFYYLKCRVAGAATADDKRAMLEAA IAAMSGLDRSSVSCRGLFGILRISSPLKLPTSCHDSLVAMIGAKLDHATLDNLLVPAPPG TTSSLYDVTLVLRFLDAFLHHAAATGARGETPRLKKVGKLVDLYLAEVAPDPSLRPAMFV ELATALPAAARDCHDALYRAIDVYFQVHTRLTEEEKMRICKGINYEKLSPECCKHLARNA GFPTRAAVQALASQHTVLKSLLRGGGPDEHLRPVSAAKHRAGGEDHDDLVAAGGQVVLYA GRLDLSLESQNLRSLLDGMHWRVMELEKVCSRMKTQMSKMKAARRATGGGGGAAAGRRAA SRSLPRMCS

Transcript Sequence

Transcript ID	Os07t0546400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21654643:21657358:1 gene:Os07g0546400 gene_biotype:protein_coding transcript_biotype:protein_coding description:NPH3 domain containing protein. (Os07t0546400-01)
Sequence	GCAGGAGTACTAGTGTGAGTGTTGCTGCTGCTGCTGCTACGGTTTCTTGTTCGTTTTGGT TCATCTCCTTCCTCCAATGGCGAGAGCTCGCAGCAATTAGGAGGTTCTTGCACCGTTCTG TGGTAGGATCAAGAATTTGGGTGGCGGCGGCGCCGGCGGCGAGGGGGTGGTCGGAGCTGC GGCGGCGGCGAGGGTCGTGTTGCGTGGGTTCCCTGGCGGTGCTGAGGCATTCGAGCTCGT CGCGAGGTTCTGTTACACCGGCGGCGGCGGCGGCGGCGTCGCGGTGACCGCGTCGAACGC GTGCGCGCTGCGGTGCGCGGCTGAGTTCATGGACATGGCGGCGGCGGCGGCGGAGGTGTC GACACCGCCGAGCCTGGTGAAGATGACGGAGAAGGCTCTCGACGAGATGCCGCAGTGGTC GTGGCAGAGCGTGGTGGACGCCGTGAGGCAGTGCCAGCGGCTGCTGCCGACGGCGGACGC CACGGGGGTGTTCGACCGGGTCGTCGGCGCGCTGGTGTCCCACGTGGCCGTCTCCCCCGG GGACGCCACCCCGACGAGCTCCTCGCCGGAGAGCTCGGCGTTCCGGTTCTCGTGCGACAC CAAGAGCAGCTGCCTCAGCGCGCGGTGCACCAGCCGCACCTGGTGGTTCGAGGACCTCGC CGTCGTCCTCGGCCCCGGCATGGTGGAGCGCGTCGCCGGGGCGCTCCTCGCCAGGGGCAC CGACCACGGCGTCGTCTCCCGGTTCCTCTTCTACTACCTCAAGTGCCGCGTCGCCGGCGC CGCCACCGCCGACGACAAGAGGGCGATGCTCGAGGCGGCGATCGCCGCCATGTCCGGCCT CGACCGGAGCTCGGTCTCCTGCAGGGGCCTCTTCGGCATCCTCCGCATCTCCTCACCGCT CAAGCTCCCCACCTCCTGCCACGACAGCCTCGTCGCCATGATCGGCGCCAAGCTCGACCA CGCGACGCTCGACAACCTGCTCGTCCCGGCGCCGCCCGGGACGACGAGCAGCCTGTACGA CGTCACCCTCGTCCTCCGCTTCCTGGACGCCTTCCTCCACCACGCCGCCGCCACCGGCGC GCGCGGCGAGACGCCGAGGCTGAAGAAGGTGGGCAAGCTCGTCGACCTGTACCTCGCCGA GGTCGCCCCGGACCCGTCGCTGCGCCCGGCCATGTTCGTCGAGCTCGCCACGGCGCTGCC CGCCGCGGCGAGGGACTGCCACGACGCGCTTTACCGCGCCATCGACGTCTACTTCCAGGT TCACACGCGGCTGACGGAGGAGGAGAAGATGAGGATCTGCAAGGGGATAAACTACGAGAA GCTCTCGCCGGAGTGCTGCAAGCACCTCGCCCGGAACGCCGGATTCCCGACGAGGGCGGC GGTGCAGGCGCTGGCGTCGCAGCACACGGTGCTCAAGAGCCTCCTCCGCGGCGGCGGCCC GGACGAACACCTGAGGCCGGTGTCCGCGGCGAAGCACCGCGCCGGCGGCGAGGACCACGA CGACCTCGTCGCCGCCGGCGGCCAGGTCGTCCTGTACGCCGGGAGGCTCGACCTGTCGCT GGAGAGCCAGAATCTCAGGTCGCTCCTCGACGGGATGCACTGGCGGGTGATGGAGCTCGA GAAGGTGTGCAGCCGGATGAAGACGCAGATGAGCAAGATGAAGGCGGCGAGGAGAGCCAC CGGAGGCGGCGGCGGCGCCGCCGCCGGCCGCCGCGCTGCTTCAAGATCACTTCCCCGGAT GTGTTCTTGAAGCTCGTTTCATACTGATTGTACATAGGAGTAGCAGCAAATGCAGAGATG TGGTTCTTTCATCCCTGCATTCTTGCCCCTTTTTTTTCTCTTCATTTTTTTTCTCAATTT TTTTCCATATGTGTATTATGATGATGCATCAGTTCTTGGTCACTGGAGAGAAGAGCTAGT AGCTGTGAAAATTGGGAGTGTCTGAACTCTGAAGAACATGGCAATGCATATAGATTGTGA ATATAGATTAACTAAAAGTCTATAATACC