Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0546000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:21625619:21628785:1 gene:Os07g0546000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopentenyl diphosphate isomerase, IPP isomerase description:Similar to Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase (EC 5.3.3.2) (Fragment). (Os07t0546000-01)
Sequence	ATGGCCGGCGCCGCCGCCGCCGTGGAGGACGCCGGGATGGACGAGGTCCAGAAGCGGCTC ATGTTCGACGACGAATGCATTTTGGTGGATGAACAAGACAATGTTGTTGGCCATGAATCA AAATATAACTGCCATCTGATGGAAAAAATCGAATCTGAAAATCTACTTCATAGGGCTTTC AGTGTATTCCTGTTCAACTCAAAATATGAACTCCTACTCCAGCAACGATCTGCAACAAAG GTTACATTTCCTCTAGTTTGGACCAACACTTGCTGCAGCCATCCTCTGTACCGTGAGTCT GAGCTTATACAGGAAAACTACCTTGGTGTTAGAAATGCTGCTCAGAGGAAGCTCTTGGAT GAGCTGGGCATCCCAGCTGAAGATGTGCCAGTTGACCAATTCACCCCTCTTGGTCGGATG CTTTACAAGGCCCCATCTGATGGAAAATGGGGTGAACACGAGCTTGACTACCTGCTGTTC ATCGTCCGCGACGTGAAGGTAGTCCCGAACCCGGACGAAGTGGCCGATGTGAAATACGTG AGCCGTGAGCAGCTGAAGGAGCTCATCCGCAAAGCGGACGCCGGAGAGGAAGGCCTGAAG CTGTCTCCCTGGTTCCGGCTGGTTGTTGACAACTTCCTCATGGGCTGGTGGGATCACGTC GAGAAAGGCACCCTCAACGAGGCCGTGGACATGGAGACCATCCACAAGCTGAAGTAA

Peptide Sequence

PEP ID	Os07t0546000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:21625619:21628785:1 gene:Os07g0546000 transcript:Os07t0546000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopentenyl diphosphate isomerase, IPP isomerase description:Similar to Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase (EC 5.3.3.2) (Fragment). (Os07t0546000-01)
Sequence	MAGAAAAVEDAGMDEVQKRLMFDDECILVDEQDNVVGHESKYNCHLMEKIESENLLHRAF SVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIQENYLGVRNAAQRKLLD ELGIPAEDVPVDQFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVVPNPDEVADVKYV SREQLKELIRKADAGEEGLKLSPWFRLVVDNFLMGWWDHVEKGTLNEAVDMETIHKLK

Transcript Sequence

Transcript ID	Os07t0546000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21625619:21628785:1 gene:Os07g0546000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:isopentenyl diphosphate isomerase, IPP isomerase description:Similar to Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase (EC 5.3.3.2) (Fragment). (Os07t0546000-01)
Sequence	GGCTGCAGAGACACTTCTTCGCAGTTCGCGTCGCGCACACACTCTCCCTTTGCCTCGCGC AGAGGCGGCCGCGCCTTCTCCGCCGCGAGGCATGGCCGGCGCCGCCGCCGCCGTGGAGGA CGCCGGGATGGACGAGGTCCAGAAGCGGCTCATGTTCGACGACGAATGCATTTTGGTGGA TGAACAAGACAATGTTGTTGGCCATGAATCAAAATATAACTGCCATCTGATGGAAAAAAT CGAATCTGAAAATCTACTTCATAGGGCTTTCAGTGTATTCCTGTTCAACTCAAAATATGA ACTCCTACTCCAGCAACGATCTGCAACAAAGGTTACATTTCCTCTAGTTTGGACCAACAC TTGCTGCAGCCATCCTCTGTACCGTGAGTCTGAGCTTATACAGGAAAACTACCTTGGTGT TAGAAATGCTGCTCAGAGGAAGCTCTTGGATGAGCTGGGCATCCCAGCTGAAGATGTGCC AGTTGACCAATTCACCCCTCTTGGTCGGATGCTTTACAAGGCCCCATCTGATGGAAAATG GGGTGAACACGAGCTTGACTACCTGCTGTTCATCGTCCGCGACGTGAAGGTAGTCCCGAA CCCGGACGAAGTGGCCGATGTGAAATACGTGAGCCGTGAGCAGCTGAAGGAGCTCATCCG CAAAGCGGACGCCGGAGAGGAAGGCCTGAAGCTGTCTCCCTGGTTCCGGCTGGTTGTTGA CAACTTCCTCATGGGCTGGTGGGATCACGTCGAGAAAGGCACCCTCAACGAGGCCGTGGA CATGGAGACCATCCACAAGCTGAAGTAAGGACTGCGATGTTGTGGCTGGAAAGAATGATC CTGAAGACTCTGTTCTTGTGCTGCTGCATATTACTCTTACCAGGGAAGTTGCAGAAGTCA GAAGAAGCTTTTGTATGTTTCTGGGTTTGGAGCTTGGAAGTGTTGGGCTCTGCTGACTGA GAGATTCCCTTATAGAGTGTCTATGTTAATTTAGCAAACTTCTATATTATACATGATTAG TTAATTGTTCGGTGTCTGAATAAAGAACAATAGCATGTTCCATGTTTATTTGCTACATAT ATGATGATGATGATGCCATTCCCTCGT