Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0545500-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:21595029:21600198:-1 gene:Os07g0545500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA198 description:Similar to VMP4 protein. (Os07t0545500-01);Similar to cDNA clone:J033131F22, full insert sequence. (Os07t0545500-02)
Sequence	ATGATGAGGCATTGTAGGAGAGAATGGCTCCTCGCCCTGTGCCTCATCTCTGTGCAGCTC CTCATTCCAACAGGCTGCGAGGGGGTTCTCGTCGCGGCAAGCAACATGTCGCCACCTGCT TTGACACCACTCCTCATCAATCAAGTAGACCAATTGGTAGAACATGCATGGGTCAAGTGT GGATTGGACAAGAGAACTCTTGAAGATGTTAGACGCCACTTCAACTACAACCATGTATTG GCAATTCTCCGTAGAATGTCTGGGCAAGACATTAAGGACACCTCTCCTGACATTGATGGA GGGACCAGTGTATTATCACTAGAAAGGAGGGACGCTATACTGAACTGTTTAAGCAAGCAG AATTTCATGAGTATCGCTGGACAGGATGGTTTAAAAATCTTGTCCGCTGATTATATCAAA GCACTTATTGCCTCACTTAGAACAGACCTTGCTCAGGAATCTTCAACTACAAAGTCAATA CCTGAACAAGCAGGAAAACCTGTCCCAGGGAAAACTTCTACACCAAAACCTGTAAACAAA CCAACCGACAGTGTATCATCTCCACCAGATCGTTCATATAAATCAGCTCCTACAGAAAAG GAAAACCCTCCTACTAAATCAGTAGCGGAAAAGAAAAAGGACAGCAGTGGCATGCCAAAT GCTTTCATTGGTTTGTCCATTGCTGGCATAGCTCTTATGGCTCATCTCTGTTTGTGCTGC TTCATGTGCCATGGGACTTCCTCATCTGACTTGAGGGATGATAAACCACTTCTGACTCTA AATCCGAGCAACTTGTCCGCTGCTTCTAAATCGTCCCAAGGAAATCCAATTGATGTCAAT AAGCTTGGGGTAGTGTCGTTGAAATCAGAGGCTGGTCAAAATGGAGATGTGAAACTAATT TCGAAGGAAGGCACAAACAATGTGAATGTGGTGCACCCAGTGAGTTCTGTGTCAGAATCA ACATTGATGCCACCTCCGGAAGGCGCAAACAACGTGAATATGGTGCACCCGGAAGGCGCA AACAACATGAATGTGGTGCACCCGGAAGGCGCAAACAACGTGAATATGGTGCACCCGGAA GGCGCAAACAACGTGAATGTGAATATGGTGCACCCAGTGGGTTCTCTGTCAGAATCAACA CCGATGCAGCCTCCTGTGATGCCACCTCCAATTCCGAAGCTTCTTTCTCCACCAGCACCC CAAGCTCCCATGCCACCATTAAAGGCTTCTCCTGTTCCTCCCCCAGAACCTTCACCACCT CCTGCTCCAAAAGCTGCACCTCCACCGCCACCACCAAAATCTACTGGCCCTGGCCCACCT CGCCCGCCACCGCCAGCCATGCCTGGTTCTTCGAAAACACGCCCACCGCCACCTCTTAAG CCAGGCGCTAAGGTGGGTGCTGTTGAAAATTCTAATGAAGCTAAAACAAAGCTCAAACCA TTCTTTTGGGATAAAGTAACTGCCAATCCTGCACGATCGATGGTGTGGGACCACCTTAAA TCAGGATCATTCCAGTTTAATGAGCAGTTGATGGAAAACCTTTTTGGTTATAATTCAACT GACAAGAGCAGTGACACCAAGAAAGATTTATCATCGAAAGATGCCACTCAACTCATAAGG ATACTTGACCCCAAAAAGGCGCAGAACCTAGCTATATCATTGAGGGCGCTTGGTGTTTCA CCTCAGGAAGTATGTAGTGCAGTTAAGGAAGGAAGTGAACTTCCATCTGATTTGATACAG ACCTTAATAAGATGGTCCCCAAGTAATGATGAGGAGCTCAGGCTTCGATTATACAGTGGG GAACTCTTTCAACTTGGTCCTGCAGAGCAATTCTTAAGAGTAATCATAGATATTCCTTAT ATTTTCCAGCGCTTAGATGCATTGCTTTTCATGGCCAATTTACCAGAAGAAGCTTCAAAT GTGAAGCAATCCTTTGCCACTTTGGAGGTGGCTTGCCAGGAGCTTAGAAACAGCCGTCTT TTTATGAAGTTACTAGAAGCTGTCCTCAAAACCGGAAATCGGATGAATGTTGGCACTTTC CGTGGTGGAGCTCAGGCTTTTAGACTCGACACGCTCCTCAAGTTGTCTGATGTCAAAGGA ACTGACGGAAAGACAACACTATTGCATTTTGTTGTTCAGGAAATCATTCGTTCCGAAGGT GTCCGTGCTGAACGGGCTGCAAAGGAGCAGAACAGTGGCGTTTCCAGTGTGAAGACTGAT GATCTAGGTGACAAAAGTGAGCAAACTGAAGACGGTTACAAACAACTGGGGCTGAAAGTT ATCTCCAGCTTAGGAGATGAACTTCAAGATGTTAGAAAGGCAGCTATCCTAGACGCGGAT CAATTGACTATGTCGGTAGCAAGTCTTGGCCACAAGCTCATGAAAACCAATGAATTCTTG AACATGGACATGAAAAGTTTGGACGAAGACAGTGGGTTTCACCGCAAGCTTACGCACTTC GTACAGCAGTCTCAGACTGATATTACTTTCTTGCTGGAGGAAGAGAAGAAAATGCGGTTA TTGGTTAAAGACACCGTCGACTATTTCCATGGAAGTGCAGGAAAGGATGAGGGCCTCCGG TTATTTGTGATAGTAAGAGATTTCCTTGCAATGCTGGACAAGGTGTGCAAGGAGGTGAAG G

Peptide Sequence

PEP ID	Os07t0545500-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:21595029:21600198:-1 gene:Os07g0545500 transcript:Os07t0545500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA198 description:Similar to VMP4 protein. (Os07t0545500-01);Similar to cDNA clone:J033131F22, full insert sequence. (Os07t0545500-02)
Sequence	MMRHCRREWLLALCLISVQLLIPTGCEGVLVAASNMSPPALTPLLINQVDQLVEHAWVKC GLDKRTLEDVRRHFNYNHVLAILRRMSGQDIKDTSPDIDGGTSVLSLERRDAILNCLSKQ NFMSIAGQDGLKILSADYIKALIASLRTDLAQESSTTKSIPEQAGKPVPGKTSTPKPVNK PTDSVSSPPDRSYKSAPTEKENPPTKSVAEKKKDSSGMPNAFIGLSIAGIALMAHLCLCC FMCHGTSSSDLRDDKPLLTLNPSNLSAASKSSQGNPIDVNKLGVVSLKSEAGQNGDVKLI SKEGTNNVNVVHPVSSVSESTLMPPPEGANNVNMVHPEGANNMNVVHPEGANNVNMVHPE GANNVNVNMVHPVGSLSESTPMQPPVMPPPIPKLLSPPAPQAPMPPLKASPVPPPEPSPP PAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPPPLKPGAKVGAVENSNEAKTKLKP FFWDKVTANPARSMVWDHLKSGSFQFNEQLMENLFGYNSTDKSSDTKKDLSSKDATQLIR ILDPKKAQNLAISLRALGVSPQEVCSAVKEGSELPSDLIQTLIRWSPSNDEELRLRLYSG ELFQLGPAEQFLRVIIDIPYIFQRLDALLFMANLPEEASNVKQSFATLEVACQELRNSRL FMKLLEAVLKTGNRMNVGTFRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEG VRAERAAKEQNSGVSSVKTDDLGDKSEQTEDGYKQLGLKVISSLGDELQDVRKAAILDAD QLTMSVASLGHKLMKTNEFLNMDMKSLDEDSGFHRKLTHFVQQSQTDITFLLEEEKKMRL LVKDTVDYFHGSAGKDEGLRLFVIVRDFLAMLDKVCKEVK

Transcript Sequence

Transcript ID	Os07t0545500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21595029:21600198:-1 gene:Os07g0545500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA198 description:Similar to VMP4 protein. (Os07t0545500-01);Similar to cDNA clone:J033131F22, full insert sequence. (Os07t0545500-02)
Sequence	GTTCTTGGGGTGGGGTTGGCGGATTGGGGAATCGGCTTCGAGCTGATTGGTTTTGACTGC GCCATCCGATTTCTTCGCTTTTGTGGAGGGGGGCAGCACGGCTGTGCATTTCGTTCTCTT GTCGTGGATGCCCCCGGAATTTATCCCCAATTCTCGCTATACTTGCTCGTCTACATCGGT GTGTTTCTTGGAGCATTTCAAGCACTTCTCGTCTTCATCGATGCATTTCTTGGAGCATTT CAAGTGTCCAGCGTCTAAATCGCTCAGGCGAATTTGGAGGAGCCTTTAGGCGCATTCCGC TCAAAATCAAGTGGAATTGTTGCATGAATCTTCAGATTGTTTTGGCTGGATTGCCAGGTT TCTTCGATCATTTTTCTCTACGGGGCTGAGGAATTTTTCGCCCCATGCCCGGAAAGCTCC AAAGGGGATGTTTGCCACAATTTTCAGAGTATCTGTGTTGAGATGATCGGTGTGGTGTAG AAGGAAGCACGCAAATGATGAGGCATTGTAGGAGAGAATGGCTCCTCGCCCTGTGCCTCA TCTCTGTGCAGCTCCTCATTCCAACAGGCTGCGAGGGGGTTCTCGTCGCGGCAAGCAACA TGTCGCCACCTGCTTTGACACCACTCCTCATCAATCAAGTAGACCAATTGGTAGAACATG CATGGGTCAAGTGTGGATTGGACAAGAGAACTCTTGAAGATGTTAGACGCCACTTCAACT ACAACCATGTATTGGCAATTCTCCGTAGAATGTCTGGGCAAGACATTAAGGACACCTCTC CTGACATTGATGGAGGGACCAGTGTATTATCACTAGAAAGGAGGGACGCTATACTGAACT GTTTAAGCAAGCAGAATTTCATGAGTATCGCTGGACAGGATGGTTTAAAAATCTTGTCCG CTGATTATATCAAAGCACTTATTGCCTCACTTAGAACAGACCTTGCTCAGGAATCTTCAA CTACAAAGTCAATACCTGAACAAGCAGGAAAACCTGTCCCAGGGAAAACTTCTACACCAA AACCTGTAAACAAACCAACCGACAGTGTATCATCTCCACCAGATCGTTCATATAAATCAG CTCCTACAGAAAAGGAAAACCCTCCTACTAAATCAGTAGCGGAAAAGAAAAAGGACAGCA GTGGCATGCCAAATGCTTTCATTGGTTTGTCCATTGCTGGCATAGCTCTTATGGCTCATC TCTGTTTGTGCTGCTTCATGTGCCATGGGACTTCCTCATCTGACTTGAGGGATGATAAAC CACTTCTGACTCTAAATCCGAGCAACTTGTCCGCTGCTTCTAAATCGTCCCAAGGAAATC CAATTGATGTCAATAAGCTTGGGGTAGTGTCGTTGAAATCAGAGGCTGGTCAAAATGGAG ATGTGAAACTAATTTCGAAGGAAGGCACAAACAATGTGAATGTGGTGCACCCAGTGAGTT CTGTGTCAGAATCAACATTGATGCCACCTCCGGAAGGCGCAAACAACGTGAATATGGTGC ACCCGGAAGGCGCAAACAACATGAATGTGGTGCACCCGGAAGGCGCAAACAACGTGAATA TGGTGCACCCGGAAGGCGCAAACAACGTGAATGTGAATATGGTGCACCCAGTGGGTTCTC TGTCAGAATCAACACCGATGCAGCCTCCTGTGATGCCACCTCCAATTCCGAAGCTTCTTT CTCCACCAGCACCCCAAGCTCCCATGCCACCATTAAAGGCTTCTCCTGTTCCTCCCCCAG AACCTTCACCACCTCCTGCTCCAAAAGCTGCACCTCCACCGCCACCACCAAAATCTACTG GCCCTGGCCCACCTCGCCCGCCACCGCCAGCCATGCCTGGTTCTTCGAAAACACGCCCAC CGCCACCTCTTAAGCCAGGCGCTAAGGTGGGTGCTGTTGAAAATTCTAATGAAGCTAAAA CAAAGCTCAAACCATTCTTTTGGGATAAAGTAACTGCCAATCCTGCACGATCGATGGTGT GGGACCACCTTAAATCAGGATCATTCCAGTTTAATGAGCAGTTGATGGAAAACCTTTTTG GTTATAATTCAACTGACAAGAGCAGTGACACCAAGAAAGATTTATCATCGAAAGATGCCA CTCAACTCATAAGGATACTTGACCCCAAAAAGGCGCAGAACCTAGCTATATCATTGAGGG CGCTTGGTGTTTCACCTCAGGAAGTATGTAGTGCAGTTAAGGAAGGAAGTGAACTTCCAT CTGATTTGATACAGACCTTAATAAGATGGTCCCCAAGTAATGATGAGGAGCTCAGGCTTC GATTATACAGTGGGGAACTCTTTCAACTTGGTCCTGCAGAGCAATTCTTAAGAGTAATCA TAGATATTCCTTATATTTTCCAGCGCTTAGATGCATTGCTTTTCATGGCCAATTTACCAG AAGAAGCTTCAAATGTGAAGCAATCCTTTGCCACTTTGGAGGTGGCTTGCCAGGAGCTTA GAAACAGCCGTCTTTTTATGAAGTTACTAGAAGCTGTCCTCAAAACCGGAAATCGGATGA ATGTTGGCACTTTCCGTGGTGGAGCTCAGGCTTTTAGACTCGACACGCTCCTCAAGTTGT CTGATGTCAAAGGAACTGACGGAAAGACAACACTATTGCATTTTGTTGTTCAGGAAATCA TTCGTTCCGAAGGTGTCCGTGCTGAACGGGCTGCAAAGGAGCAGAACAGTGGCGTTTCCA GTGTGAAGACTGATGATCTAGGTGACAAAAGTGAGCAAACTGAAGACGGTTACAAACAAC TGGGGCTGAAAGTTATCTCCAGCTTAGGAGATGAACTTCAAGATGTTAGAAAGGCAGCTA TCCTAGACGCGGATCAATTGACTATGTCGGTAGCAAGTCTTGGCCACAAGCTCATGAAAA CCAATGAATTCTTGAACATGGACATGAAAAGTTTGGACGAAGACAGTGGGTTTCACCGCA AGCTTACGCACTTCGTACAGCAGTCTCAGACTGATATTACTTTCTTGCTGGAGGAAGAGA AGAAAATGCGGTTATTGGTTAAAGACACCGTCGACTATTTCCATGGAAGTGCAGGAAAGG ATGAGGGCCTCCGGTTATTTGTGATAGTAAGAGATTTCCTTGCAATGCTGGACAAGGTGT GCAAGGAGGTGAAGG