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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0545300-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:21589820:21590917:1 gene:Os07g0545300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os07t0545300-01)
Sequence

ATGGCGGGACGTGGGAAGGCGATCGGCGCGGGGGCCGCGAAGAAGGCGACGTCGAGGAGC
TCCAAGGCCGGGCTGCAGTTCCCCGTTGGCAGGATCGCGAGGTTCCTCAAGGCCGGGAAG
TACGCCGAGCGCGTCGGCGCCGGGGCCCCCGTCTACCTCGCCGCCGTCCTCGAGTACCTC
GCCGCTGAGGTGCTCGAGCTCGCCGGGAACGCGGCGAGGGACAACAAGAAGACCCGCATC
GTGCCGCGCCACATCCAGCTCGCGGTGCGCAACGACGAGGAGTTGACCAAGCTGCTCGGC
GGCGCCACCATCGCCAGCGGCGGCGTGATGCCCAACATCCACCAGCACCTCCTCCCCAAG
AAGGCCGGGTCATCCAAGGCATCCACCGTCGACGACGACGACAACTAG

Peptide Sequence

PEP ID

Os07t0545300-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:21589820:21590917:1 gene:Os07g0545300 transcript:Os07t0545300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os07t0545300-01)
Sequence

MAGRGKAIGAGAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYL
AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPK
KAGSSKASTVDDDDN

Transcript Sequence

Transcript ID

Os07t0545300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:21589820:21590917:1 gene:Os07g0545300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os07t0545300-01)
Sequence

AGTCTTCTCGCGCCACGCGAATCCACGCCGCCGCCGCCTCTTGACCTAGCGCCGCCGCCG
CTGCCGCTGCCCCTTCTCGCCGCCGGCTTCTTCTTCTTCTTCCTTGTGTAGCGCGTGCGC
CTCTCCTCTCCTCTCGTCGGCGAGTGATATGGCGGGACGTGGGAAGGCGATCGGCGCGGG
GGCCGCGAAGAAGGCGACGTCGAGGAGCTCCAAGGCCGGGCTGCAGTTCCCCGTTGGCAG
GATCGCGAGGTTCCTCAAGGCCGGGAAGTACGCCGAGCGCGTCGGCGCCGGGGCCCCCGT
CTACCTCGCCGCCGTCCTCGAGTACCTCGCCGCTGAGGTGCTCGAGCTCGCCGGGAACGC
GGCGAGGGACAACAAGAAGACCCGCATCGTGCCGCGCCACATCCAGCTCGCGGTGCGCAA
CGACGAGGAGTTGACCAAGCTGCTCGGCGGCGCCACCATCGCCAGCGGCGGCGTGATGCC
CAACATCCACCAGCACCTCCTCCCCAAGAAGGCCGGGTCATCCAAGGCATCCACCGTCGA
CGACGACGACAACTAGGCCGCCCGGGCGCCTTCTGCATTAGTAGGATCTTTTGCTAGCTG
TTCGTCTGGATTTGCATTGTGTTGTTGCGCTGAGCAGTAGGAAGGGGAAAAAGAGAGAGA
GAAGTTCTTGGTTGGTGGTTTGGTGGCCTGATCAGGATGTGAATACGGCGAAATTTTTGT
GGGTATTTATCTAAAGATGTAAGCCTGTGATGAACTGATGATCATGTTGGGTTGGTTTGT
TTAATGGTTGAAGAAATGAGGAACAAACTGAAACTTTGAGCC