Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0543000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:21466858:21469857:-1 gene:Os07g0543000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 057 description:Similar to Helix-loop-helix-like protein (Fragment). (Os07t0543000-01);Similar to Helix-loop-helix-like protein (Fragment). (Os07t0543000-02)
Sequence	ATGGCCTCCCCGGAGGGCTCCACGTGGGTCTTCGACTGCCCTCTGATGGACGACCTCGCC GCCGCCGCCGGCTTCGACGCCGCCCCCGCCGGAGGCTTCTACTGGACGACGCCCGCTCCT CCGCAGGCGGCGCTACAGCCGCCGCCGCCGCAGCAGCAGCCCGTCGCCCCTGCCACCGCG GCTCCGAACGCCTGTGCTGAAATCAATGGCTCTGTGGACTGTGAACATGGCAAAGAACAG CCAACAAATAAACGTCCGAGATCAGAAAGTGGCACTCGACCAAGCTCCAAAGCATGCAGG GAAAAAGTAAGAAGGGACAAGTTGAACGAGAGGTTCTTGGAACTGGGTGCTGTCCTGGAA CCAGGGAAGACACCCAAAATGGACAAATCGTCTATATTGAACGATGCTATTCGTGTAATG GCTGAGCTGCGTAGTGAGGCACAGAAGTTGAAGGAATCAAATGAGAGTCTCCAAGAGAAA ATCAAAGAGTTGAAGGCTGAGAAAAACGAGCTGCGTGATGAGAAGCAAAAGCTGAAGGCA GAGAAAGAGAGCCTGGAGCAGCAGATAAAGTTCCTGAATGCTCGACCAAGCTTCGTACCA CACCCTCCGGTTATCCCAGCCAGTGCATTCACTGCTCCTCAAGGGCAAGCTGCCGGGCAG AAGCTGATGATGCCTGTGATTGGCTACCCAGGATTTCCGATGTGGCAGTTCATGCCGCCT TCTGATGTTGATACCACAGATGACACCAAGTCATGCCCTCCTGTTGCATAA

Peptide Sequence

PEP ID	Os07t0543000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:21466858:21469857:-1 gene:Os07g0543000 transcript:Os07t0543000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 057 description:Similar to Helix-loop-helix-like protein (Fragment). (Os07t0543000-01);Similar to Helix-loop-helix-like protein (Fragment). (Os07t0543000-02)
Sequence	MASPEGSTWVFDCPLMDDLAAAAGFDAAPAGGFYWTTPAPPQAALQPPPPQQQPVAPATA APNACAEINGSVDCEHGKEQPTNKRPRSESGTRPSSKACREKVRRDKLNERFLELGAVLE PGKTPKMDKSSILNDAIRVMAELRSEAQKLKESNESLQEKIKELKAEKNELRDEKQKLKA EKESLEQQIKFLNARPSFVPHPPVIPASAFTAPQGQAAGQKLMMPVIGYPGFPMWQFMPP SDVDTTDDTKSCPPVA

Transcript Sequence

Transcript ID	Os07t0543000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21466858:21469857:-1 gene:Os07g0543000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 057 description:Similar to Helix-loop-helix-like protein (Fragment). (Os07t0543000-01);Similar to Helix-loop-helix-like protein (Fragment). (Os07t0543000-02)
Sequence	ACCGCCCCGAATCCGCCCCCAAATCTCCTCGCGACCTCGAAACCCTAGCCTCCTCCGGCC ACCGTCGCCGGCCACGGTGAGCGGCCCCACCCCCCCGCAGCCATGGCCTCCCCGGAGGGC TCCACGTGGGTCTTCGACTGCCCTCTGATGGACGACCTCGCCGCCGCCGCCGGCTTCGAC GCCGCCCCCGCCGGAGGCTTCTACTGGACGACGCCCGCTCCTCCGCAGGCGGCGCTACAG CCGCCGCCGCCGCAGCAGCAGCCCGTCGCCCCTGCCACCGCGGCTCCGAACGCCTGTGCT GAAATCAATGGCTCTGTGGACTGTGAACATGGCAAAGAACAGCCAACAAATAAACGTCCG AGATCAGAAAGTGGCACTCGACCAAGCTCCAAAGCATGCAGGGAAAAAGTAAGAAGGGAC AAGTTGAACGAGAGGTTCTTGGAACTGGGTGCTGTCCTGGAACCAGGGAAGACACCCAAA ATGGACAAATCGTCTATATTGAACGATGCTATTCGTGTAATGGCTGAGCTGCGTAGTGAG GCACAGAAGTTGAAGGAATCAAATGAGAGTCTCCAAGAGAAAATCAAAGAGTTGAAGGCT GAGAAAAACGAGCTGCGTGATGAGAAGCAAAAGCTGAAGGCAGAGAAAGAGAGCCTGGAG CAGCAGATAAAGTTCCTGAATGCTCGACCAAGCTTCGTACCACACCCTCCGGTTATCCCA GCCAGTGCATTCACTGCTCCTCAAGGGCAAGCTGCCGGGCAGAAGCTGATGATGCCTGTG ATTGGCTACCCAGGATTTCCGATGTGGCAGTTCATGCCGCCTTCTGATGTTGATACCACA GATGACACCAAGTCATGCCCTCCTGTTGCATAAGTCAAAGCAAAGATCAATTTGCCTCGC CTTGTAGGAAAGAGGTGAAACTGCCTTCCATTCAAGCCCAGTTTGGTCGTCAGTGTTTAA ACTACCTAGCTAATCCCAGGATTAAACCGAAGCTTCGCTGTATCGAAGTATCAACCGGTG ACATGTGAACTGACGAAAGATGACACCGTTGTATATTACATATTAGTAAATAAATTCCAT CTGTCCAATTAAATGAGAATTAGATGCCATATAATT