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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0542900-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:21465220:21466379:1 gene:Os07g0542900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 22 description:Similar to blue copper protein. (Os07t0542900-00)
Sequence

ATGAAGGCTAGCTCCGTAGCATTGCTCGCCGCCGTCATGGCGGTCGCGGCGGTGGCCTCG
ACGGCGGTGGCCAAGGACTACACGGTCGGCGGCTCCTACGGCTGGGACACCTACGTCGAC
TACGACAAGTGGGCCGCCGGAAAGACGTTCATCGTCGGCGACACCATAACGTTCAAGTAC
GAGCCGTACCACAACGTGGTGGAGGTGCCGGCTGAGACGGACTACGACGGCTGCGTCTCG
ACCAACCCCGTCTCCGTCCACTCCGGCGGCAACACCACCTTCGAGCTCGCCGCCGCCGGC
ACGCGCTACTTCATCTGCAGCATCCCGCGCCACTGCCTCAACGGCACCATGCACGTCAAG
GTCACCACCGTCCCTTACTCCGCCTCGGCCGCCGCCGCCGCCGCCGCGGACGCCGGCCCT
TCCCCGGCGCCGCTCCCCTCGCCTCCCGCCGACGAGCAGCAGCACAGGTCGAACTCGGCG
TCGTCGCCGGCGGCCGGCCCGAGCAGCAGCGCGGCGTCCACGCCGCGGCATCGGAAGCAG
CCGGCGGTGGCCGTGGCCGGGCTGGCCTTGGCTGCTCTGGTGGCCATGGCCGCCTAA

Peptide Sequence

PEP ID

Os07t0542900-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:21465220:21466379:1 gene:Os07g0542900 transcript:Os07t0542900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 22 description:Similar to blue copper protein. (Os07t0542900-00)
Sequence

MKASSVALLAAVMAVAAVASTAVAKDYTVGGSYGWDTYVDYDKWAAGKTFIVGDTITFKY
EPYHNVVEVPAETDYDGCVSTNPVSVHSGGNTTFELAAAGTRYFICSIPRHCLNGTMHVK
VTTVPYSASAAAAAAADAGPSPAPLPSPPADEQQHRSNSASSPAAGPSSSAASTPRHRKQ
PAVAVAGLALAALVAMAA

Transcript Sequence

Transcript ID

Os07t0542900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:21465220:21466379:1 gene:Os07g0542900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UCLACYANIN-LIKE PROTEIN 22 description:Similar to blue copper protein. (Os07t0542900-00)
Sequence

CATGAAGGCTAGCTCCGTAGCATTGCTCGCCGCCGTCATGGCGGTCGCGGCGGTGGCCTC
GACGGCGGTGGCCAAGGACTACACGGTCGGCGGCTCCTACGGCTGGGACACCTACGTCGA
CTACGACAAGTGGGCCGCCGGAAAGACGTTCATCGTCGGCGACACCATAACGTTCAAGTA
CGAGCCGTACCACAACGTGGTGGAGGTGCCGGCTGAGACGGACTACGACGGCTGCGTCTC
GACCAACCCCGTCTCCGTCCACTCCGGCGGCAACACCACCTTCGAGCTCGCCGCCGCCGG
CACGCGCTACTTCATCTGCAGCATCCCGCGCCACTGCCTCAACGGCACCATGCACGTCAA
GGTCACCACCGTCCCTTACTCCGCCTCGGCCGCCGCCGCCGCCGCCGCGGACGCCGGCCC
TTCCCCGGCGCCGCTCCCCTCGCCTCCCGCCGACGAGCAGCAGCACAGGTCGAACTCGGC
GTCGTCGCCGGCGGCCGGCCCGAGCAGCAGCGCGGCGTCCACGCCGCGGCATCGGAAGCA
GCCGGCGGTGGCCGTGGCCGGGCTGGCCTTGGCTGCTCTGGTGGCCATGGCCGCCTAAAC
GATATAAAAAGAAATTAATATCGTTTTATATTTCTTATTGATTTTAATTACTATTTACAT
GTGGCGTACGTAAATACACGGGTTTCTACGTATATTTATCGAGGTGTGGTGAAACTTCTC
TTGCACCAGAGGCGTTTTGTTACTCGTTTTGAGGGTTGCTGTGTATTAATTAATTGTTGT
GTATACATAAGCCCTTCTGTATTTTGCAGTTCCATTTATTAAAGAGAAGATTCTTGCTGT
TTCATTTTGA