Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0542600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:21441037:21444823:-1 gene:Os07g0542600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to receptor-like protein kinase RK20-1. (Os07t0542600-01)
Sequence	ATGCTGCGACGCTCTTTGGTCGCCCATGCCGTTCTCCTCTTCGCGGCGGTCGCGCTCCCG CTCGCCGCCGCCCAGCCATGGCCTGTCTGCGGCACCAGCGGCGGCAACTACACGGCGGGG AGCACCTACGAGTCCAACCTCCTGCGCCTCGCGAGCACCCTCCGCGCGAACGCCTCCGCC TCCCCCACCCTCTTCGCCTCCGGCGTCCGCGGCGTCGGCCCGGACGCCGTCTACGGCCTC CTGCTCTGCCGCGGCGACATGAACCCCTCCGACTGCTTCGACTGCGGCACCAACGTCTGG AGGGACGCGGGGCCAACCTGCAACCGCACCAAGGACGCCATCCTCGTCTACAACCAATGC TACGCCCAGTTCTCCGACAGGGGCGACTTCCTCGCCGCCACCAACAACTCCGGCGAGGTG AGCCTCCTCATAAGCGGCACCAACATCACCAGCACCGACGTCGCCGGCTACGACCGCGCG GTCACCGAGCTCCTCAACGCCACCGTGCGGTACGCGGTGGAGAACTCCACGAAGCTGTTC GCCACGGGCCAGCGGGTGGGGAACGACACGGGGTTCAGCAACATCTACTCCATGGCGCAG TGCTCGCCGGACCTGTCGCCGGCGCAGTGCCGGAGCTGCCTCGACGGCCTCGTGGGCCAG TGGTGGAAGACGTTCCCGCTCAACGGGAAGGGGGCGAGGGTCGCCGGCCCGCGCTGCTAC CTGAGGTCCGAGCTGGGCCCCTTCTACACCGGTAATCCGATGGTGCGGTTGCCGGTCAAG GCCGACGAGCTCACGCAGAGAAGATTGGCAAAAGCAGAGCGTCACCCCGGAACTGATACA AATGAGGACTTTGAAAGTGTCAAGTCAACCCTGTTATCTCTGGCATCACTGCAAGTGGCA ACGGATAACTTCCACGAAAGCAATAAGATTGGTGAGGGGGGATTCGGTGCCGTTTATAAG GGAATTCTTCATGGACAAGAAGTGGCTGTGAAGAGGATGGCCAAGGGCTCCAACCAGGGG CTGGAAGAGCTGAAAAACGAGCTAGTTCTTGTCGCCAAACTTCATCACAGAAATCTTGTT CGTCTTGTTGGTTTTTGCCTTGACGAGGGGGAGAGATTACTCATCTATGAGTACATGTCC AATAAAAGCCTAGACACCTTTCTTTTTGATGCAGAGCAAAAGAGAAAACTAGACTGGGCG GTAAGATTTAAGATAATAGAAGGCATTGCCCGGGGGCTACAATATCTTCATCAGGACTCC CAAAAGAAGATCGTCCACCGTGATATGAAGGCGAGCAACATTTTACTAGACGCAGACATG AACCCCAAGATTGGGGACTTTGGCCTTGCTAGGCTCTTTGGGCAGGATCAGACTCGAGAA GTCACAAGCCGTATCGCCGGGACATTCGGTTACATGCCTCCTGAGTACGTGCTGCGCGGA CAGTACTCTACGAAATCAGACGTGTTCAGCTTTGGCATTCTTGTCATAGAGATCGTGACA GGCCGGAGAAGGAATAGCGGGCCATATTTGTCTGAGCAGAACGATGAAGATATATTGAGC ATAGTACGGAGGCACTGGGAAGAGGGAGCAATTGCAGAGATGATTGATCATTCCTTAGGA AGAAACTACAGTGAGACCGAGGTGCTGAAATGTGTCAATATTGGACTCTTGTGCGTCCAG CAAAACCCTGTAGATCGACCTACAATGGCGGATGTCATGATTTTACTCAATAGTGACACT ACTTGCACTATGCCAGCTCTTGCACCTAGGCCAGCATATTTGATCGATGGGACCTCTGGT TACTCCCAGACCGTAACACAATGGTCCGGCAGGTAG

Peptide Sequence

PEP ID	Os07t0542600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:21441037:21444823:-1 gene:Os07g0542600 transcript:Os07t0542600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to receptor-like protein kinase RK20-1. (Os07t0542600-01)
Sequence	MLRRSLVAHAVLLFAAVALPLAAAQPWPVCGTSGGNYTAGSTYESNLLRLASTLRANASA SPTLFASGVRGVGPDAVYGLLLCRGDMNPSDCFDCGTNVWRDAGPTCNRTKDAILVYNQC YAQFSDRGDFLAATNNSGEVSLLISGTNITSTDVAGYDRAVTELLNATVRYAVENSTKLF ATGQRVGNDTGFSNIYSMAQCSPDLSPAQCRSCLDGLVGQWWKTFPLNGKGARVAGPRCY LRSELGPFYTGNPMVRLPVKADELTQRRLAKAERHPGTDTNEDFESVKSTLLSLASLQVA TDNFHESNKIGEGGFGAVYKGILHGQEVAVKRMAKGSNQGLEELKNELVLVAKLHHRNLV RLVGFCLDEGERLLIYEYMSNKSLDTFLFDAEQKRKLDWAVRFKIIEGIARGLQYLHQDS QKKIVHRDMKASNILLDADMNPKIGDFGLARLFGQDQTREVTSRIAGTFGYMPPEYVLRG QYSTKSDVFSFGILVIEIVTGRRRNSGPYLSEQNDEDILSIVRRHWEEGAIAEMIDHSLG RNYSETEVLKCVNIGLLCVQQNPVDRPTMADVMILLNSDTTCTMPALAPRPAYLIDGTSG YSQTVTQWSGR

Transcript Sequence

Transcript ID	Os07t0542600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21441037:21444823:-1 gene:Os07g0542600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to receptor-like protein kinase RK20-1. (Os07t0542600-01)
Sequence	ACTGCCCCCAAACTGCTGCATCTACGGCAAAAAATGCTGCGACGCTCTTTGGTCGCCCAT GCCGTTCTCCTCTTCGCGGCGGTCGCGCTCCCGCTCGCCGCCGCCCAGCCATGGCCTGTC TGCGGCACCAGCGGCGGCAACTACACGGCGGGGAGCACCTACGAGTCCAACCTCCTGCGC CTCGCGAGCACCCTCCGCGCGAACGCCTCCGCCTCCCCCACCCTCTTCGCCTCCGGCGTC CGCGGCGTCGGCCCGGACGCCGTCTACGGCCTCCTGCTCTGCCGCGGCGACATGAACCCC TCCGACTGCTTCGACTGCGGCACCAACGTCTGGAGGGACGCGGGGCCAACCTGCAACCGC ACCAAGGACGCCATCCTCGTCTACAACCAATGCTACGCCCAGTTCTCCGACAGGGGCGAC TTCCTCGCCGCCACCAACAACTCCGGCGAGGTGAGCCTCCTCATAAGCGGCACCAACATC ACCAGCACCGACGTCGCCGGCTACGACCGCGCGGTCACCGAGCTCCTCAACGCCACCGTG CGGTACGCGGTGGAGAACTCCACGAAGCTGTTCGCCACGGGCCAGCGGGTGGGGAACGAC ACGGGGTTCAGCAACATCTACTCCATGGCGCAGTGCTCGCCGGACCTGTCGCCGGCGCAG TGCCGGAGCTGCCTCGACGGCCTCGTGGGCCAGTGGTGGAAGACGTTCCCGCTCAACGGG AAGGGGGCGAGGGTCGCCGGCCCGCGCTGCTACCTGAGGTCCGAGCTGGGCCCCTTCTAC ACCGGTAATCCGATGGTGCGGTTGCCGGTCAAGGCCGACGAGCTCACGCAGAGAAGATTG GCAAAAGCAGAGCGTCACCCCGGAACTGATACAAATGAGGACTTTGAAAGTGTCAAGTCA ACCCTGTTATCTCTGGCATCACTGCAAGTGGCAACGGATAACTTCCACGAAAGCAATAAG ATTGGTGAGGGGGGATTCGGTGCCGTTTATAAGGGAATTCTTCATGGACAAGAAGTGGCT GTGAAGAGGATGGCCAAGGGCTCCAACCAGGGGCTGGAAGAGCTGAAAAACGAGCTAGTT CTTGTCGCCAAACTTCATCACAGAAATCTTGTTCGTCTTGTTGGTTTTTGCCTTGACGAG GGGGAGAGATTACTCATCTATGAGTACATGTCCAATAAAAGCCTAGACACCTTTCTTTTT GATGCAGAGCAAAAGAGAAAACTAGACTGGGCGGTAAGATTTAAGATAATAGAAGGCATT GCCCGGGGGCTACAATATCTTCATCAGGACTCCCAAAAGAAGATCGTCCACCGTGATATG AAGGCGAGCAACATTTTACTAGACGCAGACATGAACCCCAAGATTGGGGACTTTGGCCTT GCTAGGCTCTTTGGGCAGGATCAGACTCGAGAAGTCACAAGCCGTATCGCCGGGACATTC GGTTACATGCCTCCTGAGTACGTGCTGCGCGGACAGTACTCTACGAAATCAGACGTGTTC AGCTTTGGCATTCTTGTCATAGAGATCGTGACAGGCCGGAGAAGGAATAGCGGGCCATAT TTGTCTGAGCAGAACGATGAAGATATATTGAGCATAGTACGGAGGCACTGGGAAGAGGGA GCAATTGCAGAGATGATTGATCATTCCTTAGGAAGAAACTACAGTGAGACCGAGGTGCTG AAATGTGTCAATATTGGACTCTTGTGCGTCCAGCAAAACCCTGTAGATCGACCTACAATG GCGGATGTCATGATTTTACTCAATAGTGACACTACTTGCACTATGCCAGCTCTTGCACCT AGGCCAGCATATTTGATCGATGGGACCTCTGGTTACTCCCAGACCGTAACACAATGGTCC GGCAGGTAGCAGGGGGCCGAAGCAGATCTAGCACCGTTGTTGGCTTGTTGCTGCTTGCTT TGTTTTATATTGTAAGTGTATCAGTTCTCAATTTGTATTCCATGATAACCAAGTTCAACT AATAAAGAGTAAATATATACCATTGACCAGTTTGTCT