Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0540100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:21295200:21299576:-1 gene:Os07g0540100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os07t0540100-01)
Sequence	ATGTGCCGCGGATCAGTCCTCCTCCTCCGTGTCCATGCCGCGCTGCTTCTCCTCGCGGCG CTCCCGGCGCTGATCGCCGGCCAGCCGTGGGAGATATGCGGGGAGAACGGCAACTACACG GCGAACAGCACCTACCAAGCCAACCTCAAGCAGCTCGCCGCGGCGCTCCACAAGAACGTC TCCTCCGGCACCGGCGGCGGCCGCCTCTTCGCCTCGGGCGCCGTCGGCGCCGTGCCGGAC GCCGTCTACGCGCTCGCGCTCTGCCGCGGCGACATCAACGCCTCGGCCTGCGCCGACTGC GTCGGCACCATCTTCCAGGACGCGCAGCAGCTGTGCCCCTACCGCAAGGAGGTGTCCATC GTCTACGACAGCTGCTACCTCCGCTTCTCCAACCTCGACTTCCTCTCCTCCGCCGACAAC TCCGGCGTCGTCGACCTCTACAACACCGGGACCGTCTCCGGCGACGTCGGCCGCTACGAC CGCGCGGTGACGGGCCTCCTCAACGCCACGGCCAGGTACGCGGCGGGCAACACCAACGCG TCGTCCAGGCTGTTCGCGACGGGGGTGATGGTCGGGTTCGACGCCCAGTTCCCCAAGATC TACGCCATGGCGCAGTGCTCGCCGGACCTGTCGCCGGCGCAGTGCGGGCTGTGCCTCGGC GCCATGGTGGCGCGGTGGTGGCAGACGTTCGAGCCCAACACGCAGGGCGCCAGGAGCGTC GGCGCGCGCTGCAACATGCGGGTCGAGCTGTACTCGTTCTACAACGTCCCTTCCATGCTG CAGCTGCAAGCCGAGGCCGTCGCGCCGTCGCCATCGCCGGCGCCGGCGCCGGCAGGGAAG CCACCTGCTGTGCCGGGCACTACAGGAGGGAAAAGGAGAAACGGAGCAGGTAAAGTTCTT GCAATTGTAATGCCTATAGTTGCTGCCATACTGGCAGTCACTGTAATTGGCTTTTGTTTC TGGAGGAGGAGAAGACCAGAAAAAACACCTCCACCAGGACCGCTCCGATCCGCATCTCGT TCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTTGATCTATCAACACTCCGAATCGCA ACAGATAACTTCTCCGAAAATAACAAACTTGGTGAAGGAGGATTTGGTGTTGTTTATAAG GGATCCCTACCACATGGTGAAGAGATAGCAGTAAAGAGGCTCTCACAAAGCTCTGTGCAA GGAATGGGGGAGCTGAAAAATGAGCTGGTTTTGGTTGCCAAGCTCCAGCACAAGAATCTT GTCCGTTTGGTCGGTGTTTGTCTAGAAGAGCATGAGAGGATGCTTGTCTATGAATACATG CCCAATAGAAGCTTGGATACCATTCTTTTTGATGCTGAGAAAAGCAGTCTGCTAGACTGG GGAAGAAGGCTGAAAATAATAAACGGAGTCGCTCGAGGAATGCAGTATCTCCATGAAGAT TCCCAGCTGAAGATCGTTCATCGGGACCTTAAGGCAAGCAATGTTCTTCTAGACTCTGAT TACAACCCCAAGATTTCAGACTTCGGCTTGGCAAGGCTCTTCGGAGGCGACCAAACACAG GACGTCACAAATCGCGTTGTCGGGACATATGGATACATGGCGCCAGAGTACGCGATGCGT GGGCACTACTCCGTTAAGTCAGACGTGTTCAGCTTCGGCGTCCTGGTCCTGGAGATCGTC ACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAGCAATCCGGCGATCTCCTAAGCATT ATATGGGAGCACTGGACCATGGGAACCATCATGGAGATGGTGGACCGGTCCATGGGCGAG CGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCACGTCGGGCTGCTCTGCGTGCAGGAG AACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAACGTGATGCTGAGCAGCGGCACGGTG TCGCTCAAGGCACCGTCCAGGCCGGCGTTCTACATCCGGAAGGGCGGCGGCGACGACGGC GGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGCACCTTGCCGTCGTCCGGCAGGTCG GCGCCCATGTCGCCCAACGAGGTGTCCATCACTGAGCTCGAGCCGAGATAA

Peptide Sequence

PEP ID	Os07t0540100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:21295200:21299576:-1 gene:Os07g0540100 transcript:Os07t0540100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os07t0540100-01)
Sequence	MCRGSVLLLRVHAALLLLAALPALIAGQPWEICGENGNYTANSTYQANLKQLAAALHKNV SSGTGGGRLFASGAVGAVPDAVYALALCRGDINASACADCVGTIFQDAQQLCPYRKEVSI VYDSCYLRFSNLDFLSSADNSGVVDLYNTGTVSGDVGRYDRAVTGLLNATARYAAGNTNA SSRLFATGVMVGFDAQFPKIYAMAQCSPDLSPAQCGLCLGAMVARWWQTFEPNTQGARSV GARCNMRVELYSFYNVPSMLQLQAEAVAPSPSPAPAPAGKPPAVPGTTGGKRRNGAGKVL AIVMPIVAAILAVTVIGFCFWRRRRPEKTPPPGPLRSASRSEDFESIESLFLDLSTLRIA TDNFSENNKLGEGGFGVVYKGSLPHGEEIAVKRLSQSSVQGMGELKNELVLVAKLQHKNL VRLVGVCLEEHERMLVYEYMPNRSLDTILFDAEKSSLLDWGRRLKIINGVARGMQYLHED SQLKIVHRDLKASNVLLDSDYNPKISDFGLARLFGGDQTQDVTNRVVGTYGYMAPEYAMR GHYSVKSDVFSFGVLVLEIVTGRRNSGSYYSEQSGDLLSIIWEHWTMGTIMEMVDRSMGE RAAGGEIARCIHVGLLCVQENPASRPAMSAVNVMLSSGTVSLKAPSRPAFYIRKGGGDDG GGTGSYSGSFVGTLPSSGRSAPMSPNEVSITELEPR

Transcript Sequence

Transcript ID	Os07t0540100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21295200:21299576:-1 gene:Os07g0540100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os07t0540100-01)
Sequence	AGAGTGATTCGAGAGCAAGAGCAAACCACCTTCTTCTTCTTCTTCTCTTCTTCCTCTGCA CTGCAGCTAGCTCTCTGCTCCGCCATGTGCCGCGGATCAGTCCTCCTCCTCCGTGTCCAT GCCGCGCTGCTTCTCCTCGCGGCGCTCCCGGCGCTGATCGCCGGCCAGCCGTGGGAGATA TGCGGGGAGAACGGCAACTACACGGCGAACAGCACCTACCAAGCCAACCTCAAGCAGCTC GCCGCGGCGCTCCACAAGAACGTCTCCTCCGGCACCGGCGGCGGCCGCCTCTTCGCCTCG GGCGCCGTCGGCGCCGTGCCGGACGCCGTCTACGCGCTCGCGCTCTGCCGCGGCGACATC AACGCCTCGGCCTGCGCCGACTGCGTCGGCACCATCTTCCAGGACGCGCAGCAGCTGTGC CCCTACCGCAAGGAGGTGTCCATCGTCTACGACAGCTGCTACCTCCGCTTCTCCAACCTC GACTTCCTCTCCTCCGCCGACAACTCCGGCGTCGTCGACCTCTACAACACCGGGACCGTC TCCGGCGACGTCGGCCGCTACGACCGCGCGGTGACGGGCCTCCTCAACGCCACGGCCAGG TACGCGGCGGGCAACACCAACGCGTCGTCCAGGCTGTTCGCGACGGGGGTGATGGTCGGG TTCGACGCCCAGTTCCCCAAGATCTACGCCATGGCGCAGTGCTCGCCGGACCTGTCGCCG GCGCAGTGCGGGCTGTGCCTCGGCGCCATGGTGGCGCGGTGGTGGCAGACGTTCGAGCCC AACACGCAGGGCGCCAGGAGCGTCGGCGCGCGCTGCAACATGCGGGTCGAGCTGTACTCG TTCTACAACGTCCCTTCCATGCTGCAGCTGCAAGCCGAGGCCGTCGCGCCGTCGCCATCG CCGGCGCCGGCGCCGGCAGGGAAGCCACCTGCTGTGCCGGGCACTACAGGAGGGAAAAGG AGAAACGGAGCAGGTAAAGTTCTTGCAATTGTAATGCCTATAGTTGCTGCCATACTGGCA GTCACTGTAATTGGCTTTTGTTTCTGGAGGAGGAGAAGACCAGAAAAAACACCTCCACCA GGACCGCTCCGATCCGCATCTCGTTCGGAGGACTTTGAGAGTATTGAGTCACTTTTTCTT GATCTATCAACACTCCGAATCGCAACAGATAACTTCTCCGAAAATAACAAACTTGGTGAA GGAGGATTTGGTGTTGTTTATAAGGGATCCCTACCACATGGTGAAGAGATAGCAGTAAAG AGGCTCTCACAAAGCTCTGTGCAAGGAATGGGGGAGCTGAAAAATGAGCTGGTTTTGGTT GCCAAGCTCCAGCACAAGAATCTTGTCCGTTTGGTCGGTGTTTGTCTAGAAGAGCATGAG AGGATGCTTGTCTATGAATACATGCCCAATAGAAGCTTGGATACCATTCTTTTTGATGCT GAGAAAAGCAGTCTGCTAGACTGGGGAAGAAGGCTGAAAATAATAAACGGAGTCGCTCGA GGAATGCAGTATCTCCATGAAGATTCCCAGCTGAAGATCGTTCATCGGGACCTTAAGGCA AGCAATGTTCTTCTAGACTCTGATTACAACCCCAAGATTTCAGACTTCGGCTTGGCAAGG CTCTTCGGAGGCGACCAAACACAGGACGTCACAAATCGCGTTGTCGGGACATATGGATAC ATGGCGCCAGAGTACGCGATGCGTGGGCACTACTCCGTTAAGTCAGACGTGTTCAGCTTC GGCGTCCTGGTCCTGGAGATCGTCACGGGGAGGAGGAACAGCGGCTCCTACTACAGCGAG CAATCCGGCGATCTCCTAAGCATTATATGGGAGCACTGGACCATGGGAACCATCATGGAG ATGGTGGACCGGTCCATGGGCGAGCGCGCGGCGGGCGGCGAGATCGCGAGGTGCATCCAC GTCGGGCTGCTCTGCGTGCAGGAGAACCCGGCGAGCAGGCCGGCCATGTCGGCGGTGAAC GTGATGCTGAGCAGCGGCACGGTGTCGCTCAAGGCACCGTCCAGGCCGGCGTTCTACATC CGGAAGGGCGGCGGCGACGACGGCGGCGGCACGGGGTCGTACTCGGGGTCGTTCGTCGGC ACCTTGCCGTCGTCCGGCAGGTCGGCGCCCATGTCGCCCAACGAGGTGTCCATCACTGAG CTCGAGCCGAGATAAGGAAGAAAAATGTAGCAGAGCCATGTCATGTCACAGGAGTGAAGG GCTCCGGGGATGCCTAATTTGTGATTTTGTGTGCTGTGATGGTGTCCTCAAGATGCTACA ATGTATAGAAACAGGCAGTAATCGTTGGCAAGAACAAAATGCCAGCAAAACAGTATAGCA CTTTAGTGTTGTCTTTTAACTCTTATGGCGAATTATGCTGAGATAATTGCATGATTTGCA GGTGTTCATTACAAATATATTACCCTCGTTTCATATT