Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0539400-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:21245036:21247034:-1 gene:Os07g0539400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 12 description:Similar to hydrolase, hydrolyzing O-glycosyl compounds. (Os07t0539400-00)
Sequence	ATGGATCCACCGGCCGTGGTGAATCTTCTGAAGGAGAACGGCATCACGAAGGTGAGGATC TACGACGCCGACCCGACGGTGCTGAGATCGCTGTCCAACACAGGCATCAAGGTGATGGTG GCACTACCCAACAAGGACCTTGCTTCTGCAGGCCACGATCAGGGAAGTGCGCTAGACTGG GTGAAAACAAACATTGTTCCGTACTATAACCAGGGCACACAAATCAATGGTGTGGCTGTG GGGAATGAGGTGTTCAGGCAAGCACCCAACTTGACCCCTCAGCTGTTACCGGCGATGAAG AATGTGCAGACGGCGCTAGCGAGACTGGGCCTTGCCGACATCATAAAGGTATCAACACCC ATTAATTTTGATGCGGTCAATGTGTCATGGCCATCATCCAAGGGTGTGTTTCAAGACAGC ATCGCCCAGTCGGTAATGAGTCCCATGATCGATTTCTTGCAACAGACCAACTCATATCTC ATGGTCAATTTCTACCCATATATTGCCTGGGCTAACTCTAAAGGCCAGATCTCCCGCGAT TACGCTACATTTGGCCCCAACGCCGGTGTAGTCGATCCGTGGAGCCACATCACATACTAT AGTCTCTTTGATGCCCAGCTCGATGCTGTTTACTACGCTATAAATCAGGTTTCTGGTGAT AGTGTGAGGGCCTCAATGGCCCAAACAAGATGGGGGCACCCGACACCAAGGGTGCCCGTC AAATGTTCGGAATGTGGGCATCCCTCCGGTGGTCAGTTCCGCAAGTTGACCACACAAGCT GATGCCGAAGTGGATGTGGCTACAAAAGCTAACGCCCAAGCATTCAACAATGGTATTATC AGACGCGCTCTGTTTGGAGCCTCTGGTATGCCTGATGTCTCTGTGTACATCTTCGCTCTT TTCAACGAGAACAAGAAGGCTGGAGCATCTGTAGAACGCAACTTCGGCCTGTTCTACCCT AACGGTACAAAGGTTTACGAGGTTGATTTTCATGGTGGTGGTATTTGTCCCACCAAGGCG AGCTGGTGCGTGGCAAATTTAGCTGTGGGGAATTCCCGGCTGCAGGCGGCGTTGGATTGG GCTTGTAGTAACGGCGCAGACTGCAGCGCTATCCAACAGGGCAAACCTTGCTTCGAGCCA AACACAATGGTTGCGCATGCGTCTTTCGCATTCAATGACTACTACCAGCGGATGGGCCAA GCCAATGGGACATGCGACTTTGCTGGCGCTGCTTATATTGTCTTCCAACCATCAGAAAGC ATTTGCGACCCAAATCCAAGTTGGTGTATCGCGAACCCTGCAGTTGGGGACATGCGGCTA CAGGCAGCCCTAGATTATGCATGCGGCAGCTGTGCAGACTGCAGCGCCATCCAGCCCGGT GCACGGTGTTTCGAGCCTAACACTAAGGTGGCGCACGCATCCTACGCATTCAACGACTAT TACCAGCGTGTTGGCCGAGTCAGTGGCTCGTGTGACTTCGGTGGTGCTGGTTCCATTACC TACCAGGCACCAGAGATTGGAAACTGCGTCCTTCCGCCAATGCTTGAACTGGACAAAGCG TACTGA

Peptide Sequence

PEP ID	Os07t0539400-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:21245036:21247034:-1 gene:Os07g0539400 transcript:Os07t0539400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 12 description:Similar to hydrolase, hydrolyzing O-glycosyl compounds. (Os07t0539400-00)
Sequence	MDPPAVVNLLKENGITKVRIYDADPTVLRSLSNTGIKVMVALPNKDLASAGHDQGSALDW VKTNIVPYYNQGTQINGVAVGNEVFRQAPNLTPQLLPAMKNVQTALARLGLADIIKVSTP INFDAVNVSWPSSKGVFQDSIAQSVMSPMIDFLQQTNSYLMVNFYPYIAWANSKGQISRD YATFGPNAGVVDPWSHITYYSLFDAQLDAVYYAINQVSGDSVRASMAQTRWGHPTPRVPV KCSECGHPSGGQFRKLTTQADAEVDVATKANAQAFNNGIIRRALFGASGMPDVSVYIFAL FNENKKAGASVERNFGLFYPNGTKVYEVDFHGGGICPTKASWCVANLAVGNSRLQAALDW ACSNGADCSAIQQGKPCFEPNTMVAHASFAFNDYYQRMGQANGTCDFAGAAYIVFQPSES ICDPNPSWCIANPAVGDMRLQAALDYACGSCADCSAIQPGARCFEPNTKVAHASYAFNDY YQRVGRVSGSCDFGGAGSITYQAPEIGNCVLPPMLELDKAY

Transcript Sequence

Transcript ID	Os07t0539400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21245036:21247034:-1 gene:Os07g0539400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 12 description:Similar to hydrolase, hydrolyzing O-glycosyl compounds. (Os07t0539400-00)
Sequence	ATGGATCCACCGGCCGTGGTGAATCTTCTGAAGGAGAACGGCATCACGAAGGTGAGGATC TACGACGCCGACCCGACGGTGCTGAGATCGCTGTCCAACACAGGCATCAAGGTGATGGTG GCACTACCCAACAAGGACCTTGCTTCTGCAGGCCACGATCAGGGAAGTGCGCTAGACTGG GTGAAAACAAACATTGTTCCGTACTATAACCAGGGCACACAAATCAATGGTGTGGCTGTG GGGAATGAGGTGTTCAGGCAAGCACCCAACTTGACCCCTCAGCTGTTACCGGCGATGAAG AATGTGCAGACGGCGCTAGCGAGACTGGGCCTTGCCGACATCATAAAGGTATCAACACCC ATTAATTTTGATGCGGTCAATGTGTCATGGCCATCATCCAAGGGTGTGTTTCAAGACAGC ATCGCCCAGTCGGTAATGAGTCCCATGATCGATTTCTTGCAACAGACCAACTCATATCTC ATGGTCAATTTCTACCCATATATTGCCTGGGCTAACTCTAAAGGCCAGATCTCCCGCGAT TACGCTACATTTGGCCCCAACGCCGGTGTAGTCGATCCGTGGAGCCACATCACATACTAT AGTCTCTTTGATGCCCAGCTCGATGCTGTTTACTACGCTATAAATCAGGTTTCTGGTGAT AGTGTGAGGGCCTCAATGGCCCAAACAAGATGGGGGCACCCGACACCAAGGGTGCCCGTC AAATGTTCGGAATGTGGGCATCCCTCCGGTGGTCAGTTCCGCAAGTTGACCACACAAGCT GATGCCGAAGTGGATGTGGCTACAAAAGCTAACGCCCAAGCATTCAACAATGGTATTATC AGACGCGCTCTGTTTGGAGCCTCTGGTATGCCTGATGTCTCTGTGTACATCTTCGCTCTT TTCAACGAGAACAAGAAGGCTGGAGCATCTGTAGAACGCAACTTCGGCCTGTTCTACCCT AACGGTACAAAGGTTTACGAGGTTGATTTTCATGGTGGTGGTATTTGTCCCACCAAGGCG AGCTGGTGCGTGGCAAATTTAGCTGTGGGGAATTCCCGGCTGCAGGCGGCGTTGGATTGG GCTTGTAGTAACGGCGCAGACTGCAGCGCTATCCAACAGGGCAAACCTTGCTTCGAGCCA AACACAATGGTTGCGCATGCGTCTTTCGCATTCAATGACTACTACCAGCGGATGGGCCAA GCCAATGGGACATGCGACTTTGCTGGCGCTGCTTATATTGTCTTCCAACCATCAGAAAGC ATTTGCGACCCAAATCCAAGTTGGTGTATCGCGAACCCTGCAGTTGGGGACATGCGGCTA CAGGCAGCCCTAGATTATGCATGCGGCAGCTGTGCAGACTGCAGCGCCATCCAGCCCGGT GCACGGTGTTTCGAGCCTAACACTAAGGTGGCGCACGCATCCTACGCATTCAACGACTAT TACCAGCGTGTTGGCCGAGTCAGTGGCTCGTGTGACTTCGGTGGTGCTGGTTCCATTACC TACCAGGCACCAGAGATTGGAAACTGCGTCCTTCCGCCAATGCTTGAACTGGACAAAGCG TACTGA