Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0539300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:21238284:21241263:-1 gene:Os07g0539300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 13 description:Glycoside hydrolase, family 17 protein. (Os07t0539300-01);Glycoside hydrolase, family 17 protein. (Os07t0539300-02)
Sequence	ATGGCATTCAGTCACCTCCTCCACGCCCTCCTCGTGGCCGCGGCGTTGCCGCTGCTCCTT CTCCCCCGTGCTGCAGATGCTGGCGAGATCGGGGTGTGCTACGGGAGGGACGCGAACAAC CTGATCGACCCACCGGCGGCGGTGAGCCTTCTGAAGGCGAACGGCATCTCCGCGGTGAGG ATCTTCGACGCGGACCAGACGGTGCTGGACGCGATGGCGAACACCGGCATCAAGGTGATG GTGGCGATACCCAACGCCGATCTGGCCGCCGCCGGCCAGGATCTGCGCAGCGCGACCGAC TGGGTGACGAACAACGTGGTGCCGTATCGCAGCCGGGGCACGCTGATCAACGGCGTCGCC GTCGGGAACGAGGTGTTCAGGCAGAGACCCGAACTGACCGGGATGCTCGTCTCGGCCATG CGAAACTTGCACAAGGCGCTGGAGAACCTGAACCTGGCGAACGACGTAAAGGTGTCCACG CCGATCGCCTTCGATGCGCTCAAGCAGTCGTCCCCTCCATCTGCGGGGGAGTTTAAAGAT GAGATCGCGCAATCGGTGATGAAGCCCATGATTGACTTCTTGAAACAGACCGGCTCGTAC TTCATGGTCAATCTCTACCCGTACTTCGCATACGTGGCTCAGCCTGACAAAATCTCTCTG GAGTTCGCGACGTTCCGCCCTAACGCTGGTGTGCTTGATGGCAATACCGGCATCAGGTAC TTCAGCCTCTTTGATGCTCAGCTCGACGCTGTTTATGCTGCGATAAACAGGGTTTCTGGT GGTAGCTTAACGGTCTCAATGGCTCGACGAGATGGAATCCTTAGTGTGCAAGCTTCAGAA TCAGGGCACCCCTCTGGAGGTACATTTCCCCTATTTTCCATGCTAGCTGCAGCCGATACG GACTCGATAGCCACGATAGCCGATGCCCAAGCGTACAACAATGGGCTTATCAGACGTGTA GTATCCGGAGCCTCCGGTATGCGTGACGTCTCCGCCTACATCTTCTCTCTTTTCAATGAA AACGAGAAGCCTGGGCCAGCCATAGAGAGAAACTTTGGCTTGTTCTACCCAAATGGTCAG AAGGTGTATGAGGTTGACTTTAGGGGCGGTGGCGGTGGCGGAGCTTGCCCCACAAAGACA AGTTGGTGTGTGGCAAGAACAGATGTTGGGAGTGCAGCATTGCAGTCAGCATTGGACTTT GCGTGCGGTAACGGCGCGGACTGCAGCGCTATCCGGCAGGGCAGTGTGTGTTTCGAACCA AACACCTTGGTTGCACACGCGTCGTACGCATTCAACGACTACTACCAACGCAAGGGCCAG GCCAGCGGCACTTGCAACTTCTCTGGCGCCGCTTCCATCGTATTCAAGCCATCGCCAAGC ATATGTGATCCGAACCCAAGTTGGTGCGTTGCGAAATCGGAGGTCGGGGACGCACAACTA CAAAATGCACTAGACTATGCATGTGGTAGCTGCGCGGACTGCAGCGCCATTCAACCAGGT GCACGGTGCTTTGATCCTGACACTAAGGTAGCACACGCGACCTATGCATTCAACGATTTT TACCAGACCACCGGCCGGGCTAGTGGATCGTGTGACTTTGCCGGTGCTGCTTCTATTGTC AACCAGCAACCAAAAATAGGAAACTGCGTGCTCCCACCAAACAATGCTGGGACAGAACAA ACTGCAATTGAAGATCAATCGACTGCAAACTTACCAGCAACAGCTTGGCAGTGA

Peptide Sequence

PEP ID	Os07t0539300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:21238284:21241263:-1 gene:Os07g0539300 transcript:Os07t0539300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 13 description:Glycoside hydrolase, family 17 protein. (Os07t0539300-01);Glycoside hydrolase, family 17 protein. (Os07t0539300-02)
Sequence	MAFSHLLHALLVAAALPLLLLPRAADAGEIGVCYGRDANNLIDPPAAVSLLKANGISAVR IFDADQTVLDAMANTGIKVMVAIPNADLAAAGQDLRSATDWVTNNVVPYRSRGTLINGVA VGNEVFRQRPELTGMLVSAMRNLHKALENLNLANDVKVSTPIAFDALKQSSPPSAGEFKD EIAQSVMKPMIDFLKQTGSYFMVNLYPYFAYVAQPDKISLEFATFRPNAGVLDGNTGIRY FSLFDAQLDAVYAAINRVSGGSLTVSMARRDGILSVQASESGHPSGGTFPLFSMLAAADT DSIATIADAQAYNNGLIRRVVSGASGMRDVSAYIFSLFNENEKPGPAIERNFGLFYPNGQ KVYEVDFRGGGGGGACPTKTSWCVARTDVGSAALQSALDFACGNGADCSAIRQGSVCFEP NTLVAHASYAFNDYYQRKGQASGTCNFSGAASIVFKPSPSICDPNPSWCVAKSEVGDAQL QNALDYACGSCADCSAIQPGARCFDPDTKVAHATYAFNDFYQTTGRASGSCDFAGAASIV NQQPKIGNCVLPPNNAGTEQTAIEDQSTANLPATAWQ

Transcript Sequence

Transcript ID	Os07t0539300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21238284:21241263:-1 gene:Os07g0539300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 13 description:Glycoside hydrolase, family 17 protein. (Os07t0539300-01);Glycoside hydrolase, family 17 protein. (Os07t0539300-02)
Sequence	ATGGGCATATATATCAAGAGACATAGGTTACTCTATTGTACCGATAAATATGTTTGTTAA CCGTTCCACCAAAGAGTATCCAATGCAATAGGAGTAGTTGAGATGCTATTGCTGAAGTAT TTATGCTGCAACTTAGCTTCTGTTTTGTCGGCACATTAGCTGGGTGTTAGTCAAAGATGT AGGGTATATCTCGAATTAATACTTTTTTAGTCACGTTTAGTACCGAACGCCATGAATCTT TTAAGACTTAGCCAATTCGTCTTCCATCTCCTCAGCTTTCCAAGTTCTTCGCTTTCCTTT GCACCATTCCGTATTCAAAGATCCACTGCCCTTTCTCTTTAACTGACGGGAAGACACAAG GAAGCCATCTTGACAGCTCTAAGATCGGACCTGCTGGCTGCTGCTGTGATTTTTGGATGG ACCAGATGTAGGGATCTCCAAAGAAGCAATCAGCCCTCTTGATTTACGCTGCCTCTTGCC ACGGTGTGCACTGTGCAGTTGCAGAGTAGAGCATGGCATTCAGTCACCTCCTCCACGCCC TCCTCGTGGCCGCGGCGTTGCCGCTGCTCCTTCTCCCCCGTGCTGCAGATGCTGGCGAGA TCGGGGTGTGCTACGGGAGGGACGCGAACAACCTGATCGACCCACCGGCGGCGGTGAGCC TTCTGAAGGCGAACGGCATCTCCGCGGTGAGGATCTTCGACGCGGACCAGACGGTGCTGG ACGCGATGGCGAACACCGGCATCAAGGTGATGGTGGCGATACCCAACGCCGATCTGGCCG CCGCCGGCCAGGATCTGCGCAGCGCGACCGACTGGGTGACGAACAACGTGGTGCCGTATC GCAGCCGGGGCACGCTGATCAACGGCGTCGCCGTCGGGAACGAGGTGTTCAGGCAGAGAC CCGAACTGACCGGGATGCTCGTCTCGGCCATGCGAAACTTGCACAAGGCGCTGGAGAACC TGAACCTGGCGAACGACGTAAAGGTGTCCACGCCGATCGCCTTCGATGCGCTCAAGCAGT CGTCCCCTCCATCTGCGGGGGAGTTTAAAGATGAGATCGCGCAATCGGTGATGAAGCCCA TGATTGACTTCTTGAAACAGACCGGCTCGTACTTCATGGTCAATCTCTACCCGTACTTCG CATACGTGGCTCAGCCTGACAAAATCTCTCTGGAGTTCGCGACGTTCCGCCCTAACGCTG GTGTGCTTGATGGCAATACCGGCATCAGGTACTTCAGCCTCTTTGATGCTCAGCTCGACG CTGTTTATGCTGCGATAAACAGGGTTTCTGGTGGTAGCTTAACGGTCTCAATGGCTCGAC GAGATGGAATCCTTAGTGTGCAAGCTTCAGAATCAGGGCACCCCTCTGGAGGTACATTTC CCCTATTTTCCATGCTAGCTGCAGCCGATACGGACTCGATAGCCACGATAGCCGATGCCC AAGCGTACAACAATGGGCTTATCAGACGTGTAGTATCCGGAGCCTCCGGTATGCGTGACG TCTCCGCCTACATCTTCTCTCTTTTCAATGAAAACGAGAAGCCTGGGCCAGCCATAGAGA GAAACTTTGGCTTGTTCTACCCAAATGGTCAGAAGGTGTATGAGGTTGACTTTAGGGGCG GTGGCGGTGGCGGAGCTTGCCCCACAAAGACAAGTTGGTGTGTGGCAAGAACAGATGTTG GGAGTGCAGCATTGCAGTCAGCATTGGACTTTGCGTGCGGTAACGGCGCGGACTGCAGCG CTATCCGGCAGGGCAGTGTGTGTTTCGAACCAAACACCTTGGTTGCACACGCGTCGTACG CATTCAACGACTACTACCAACGCAAGGGCCAGGCCAGCGGCACTTGCAACTTCTCTGGCG CCGCTTCCATCGTATTCAAGCCATCGCCAAGCATATGTGATCCGAACCCAAGTTGGTGCG TTGCGAAATCGGAGGTCGGGGACGCACAACTACAAAATGCACTAGACTATGCATGTGGTA GCTGCGCGGACTGCAGCGCCATTCAACCAGGTGCACGGTGCTTTGATCCTGACACTAAGG TAGCACACGCGACCTATGCATTCAACGATTTTTACCAGACCACCGGCCGGGCTAGTGGAT CGTGTGACTTTGCCGGTGCTGCTTCTATTGTCAACCAGCAACCAAAAATAGGAAACTGCG TGCTCCCACCAAACAATGCTGGGACAGAACAAACTGCAATTGAAGATCAATCGACTGCAA ACTTACCAGCAACAGCTTGGCAGTGAGGATGGATTAAAGAATCACTTCATATTTTTCTGC AGAGAAAAAAATAATGGTACCATTAATAATTAGTTGGGATTGAAGAGACGAATAAATGTA CCGTTCACTCCTGTTGAATGAAACCCTGCTGTTAGTATTC