Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0539100-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:21223272:21225595:-1 gene:Os07g0539100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 11 description:Glycoside hydrolase, family 17 protein. (Os07t0539100-01);Glycoside hydrolase, family 17 protein. (Os07t0539100-02)
Sequence	ATGGCAGTCAATCACAAACTCAGCGCCCTCCTCGTGGCCACGGCGTTGCCGCTGCTCCTT CTCTCCACTGCAGATGCGGGCGAGATTGGGGTGTGCTACGGGAGGGATGCGAGCAATCTG ATCGATCCGCCGGAAGTGGTGAAGCTTCTGAACGCGAACAGCATCACGATGGTGAGGATC TATGACACTGACCCGACGGTGCTCAACGCTCTCGCTAACACAGGCATCAAGGTGATGGTG ATGCTACCTAACAAGGATCTTGCTTCCGCTGGTGCGGATGTGGGGAGCGCAACCAACTGG GTGAAGAACAACGTGGTGCCGTACCTCAACCAGGGCACGCTGATCAATGGCGTGGCCGTG GGAAACGAGGTGTTCAAACAACAACCTGAACTGACTGGTATGCTTGTCTCGGCCATGCAA AATGTGCAAATGGCGTTAGCGAACCTGAACCTGGCGGATGGCATAAAGGTGTCGACGCCG ATTGCATTCGATGCACTCGATGTGTCGTTCCCGCCATCAGATGGGAGGTTCAAGGACAGC ATCGCGCAGTCGGTGATGAAGCCCATGATCGACTTCTTGGTACGGACTGGCTCATACCTC TTGGTAAATCTTTACCCTATGTACGCTGCGGCGGATCCGTCGACCCACATCTCTATCGAG TACGCAACGTTCCGTCCTAATAGTGGTGTGCTCGACGAAAAAACCGGCATCATGTATTTC AGCCTCTTTGATGCTGAGCTCGATGCTGTTTACGCCGCAATAAGTAAAGTTTCCGGTGGT AGCTTGAGGGCATCATTGGCCCAAGGAGATCAAATGTTAGTTCAAGTTGCAGAAACAGGG CATTCCTCTGGAAATACATTTGGTGGGCCAGTGGTCGTTGAAGCTGACGCGGATTTGAAT GCAATAGCTACAATACCCAATGCCAAAGCGTACAACAATGGTCTTATCAGACGTGTGCTC TCCGGATCCCCAGGTAAGCACGACGTCTCTGCCTACATCTTCTCTCTTTTCAACGAGAAC TTGAAGCCTGGGCCAGCCACGGAGGGACACTTTGGCCTATTCTACCCAAACGGCCAGCAG GTGTATGAGGTCAACTTTCAAGGTGGTAGAAGTCCCTGTCCAACGAATGCAAGCTGGTGT GTGGCGAACCCGAATGTTGATAATGCGGCATTACAGAGAGCGTTGGACTGGGCGTGCAAT AATGGCGCAGACTGCAGCGCTATCCAGCTGGGCAAAGCATGCTATGAGCCGAACACCTTA GTTGCACATGCATCTTACGCATTCAATGATTACTACCAACGCAAGGGCCAGGCTAGCGGC ACGTGCAACTTCAATGGTGTCGCTTTCATCGTCTACAAGCCATCACCAAGCATCTGCGAT CCGAACCCAAGTTGGTGCGTTGCGAAAGATAGTGTCGGGGAAGCACAACTACAGAATGCA CTAGACTACGCGTGCGGTAGTTGTGCCGACTGCAGCGCCATACAGCGCGGTGCACAGTGC TTTAATCCGGACACCAAAGTGGCTCACGCAACCTATGCATTCAACGACTATTACCAGACA GCCGGTCGGGCCAGTGGCTCGTGTGACTTTGCCGGTGCCGCAACCATTGTCACACAACAA CCAAAGATTGGAAACTGCCTACTCCCACCAAACAACGCTTGA

Peptide Sequence

PEP ID	Os07t0539100-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:21223272:21225595:-1 gene:Os07g0539100 transcript:Os07t0539100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 11 description:Glycoside hydrolase, family 17 protein. (Os07t0539100-01);Glycoside hydrolase, family 17 protein. (Os07t0539100-02)
Sequence	MAVNHKLSALLVATALPLLLLSTADAGEIGVCYGRDASNLIDPPEVVKLLNANSITMVRI YDTDPTVLNALANTGIKVMVMLPNKDLASAGADVGSATNWVKNNVVPYLNQGTLINGVAV GNEVFKQQPELTGMLVSAMQNVQMALANLNLADGIKVSTPIAFDALDVSFPPSDGRFKDS IAQSVMKPMIDFLVRTGSYLLVNLYPMYAAADPSTHISIEYATFRPNSGVLDEKTGIMYF SLFDAELDAVYAAISKVSGGSLRASLAQGDQMLVQVAETGHSSGNTFGGPVVVEADADLN AIATIPNAKAYNNGLIRRVLSGSPGKHDVSAYIFSLFNENLKPGPATEGHFGLFYPNGQQ VYEVNFQGGRSPCPTNASWCVANPNVDNAALQRALDWACNNGADCSAIQLGKACYEPNTL VAHASYAFNDYYQRKGQASGTCNFNGVAFIVYKPSPSICDPNPSWCVAKDSVGEAQLQNA LDYACGSCADCSAIQRGAQCFNPDTKVAHATYAFNDYYQTAGRASGSCDFAGAATIVTQQ PKIGNCLLPPNNA

Transcript Sequence

Transcript ID	Os07t0539100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:21223272:21225595:-1 gene:Os07g0539100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-1, 3-glucanase 11 description:Glycoside hydrolase, family 17 protein. (Os07t0539100-01);Glycoside hydrolase, family 17 protein. (Os07t0539100-02)
Sequence	ATTCAACGAACAACGACTACTCTTGACTCCACTCAGGAGCAGAGCATGGCAGTCAATCAC AAACTCAGCGCCCTCCTCGTGGCCACGGCGTTGCCGCTGCTCCTTCTCTCCACTGCAGAT GCGGGCGAGATTGGGGTGTGCTACGGGAGGGATGCGAGCAATCTGATCGATCCGCCGGAA GTGGTGAAGCTTCTGAACGCGAACAGCATCACGATGGTGAGGATCTATGACACTGACCCG ACGGTGCTCAACGCTCTCGCTAACACAGGCATCAAGGTGATGGTGATGCTACCTAACAAG GATCTTGCTTCCGCTGGTGCGGATGTGGGGAGCGCAACCAACTGGGTGAAGAACAACGTG GTGCCGTACCTCAACCAGGGCACGCTGATCAATGGCGTGGCCGTGGGAAACGAGGTGTTC AAACAACAACCTGAACTGACTGGTATGCTTGTCTCGGCCATGCAAAATGTGCAAATGGCG TTAGCGAACCTGAACCTGGCGGATGGCATAAAGGTGTCGACGCCGATTGCATTCGATGCA CTCGATGTGTCGTTCCCGCCATCAGATGGGAGGTTCAAGGACAGCATCGCGCAGTCGGTG ATGAAGCCCATGATCGACTTCTTGGTACGGACTGGCTCATACCTCTTGGTAAATCTTTAC CCTATGTACGCTGCGGCGGATCCGTCGACCCACATCTCTATCGAGTACGCAACGTTCCGT CCTAATAGTGGTGTGCTCGACGAAAAAACCGGCATCATGTATTTCAGCCTCTTTGATGCT GAGCTCGATGCTGTTTACGCCGCAATAAGTAAAGTTTCCGGTGGTAGCTTGAGGGCATCA TTGGCCCAAGGAGATCAAATGTTAGTTCAAGTTGCAGAAACAGGGCATTCCTCTGGAAAT ACATTTGGTGGGCCAGTGGTCGTTGAAGCTGACGCGGATTTGAATGCAATAGCTACAATA CCCAATGCCAAAGCGTACAACAATGGTCTTATCAGACGTGTGCTCTCCGGATCCCCAGGT AAGCACGACGTCTCTGCCTACATCTTCTCTCTTTTCAACGAGAACTTGAAGCCTGGGCCA GCCACGGAGGGACACTTTGGCCTATTCTACCCAAACGGCCAGCAGGTGTATGAGGTCAAC TTTCAAGGTGGTAGAAGTCCCTGTCCAACGAATGCAAGCTGGTGTGTGGCGAACCCGAAT GTTGATAATGCGGCATTACAGAGAGCGTTGGACTGGGCGTGCAATAATGGCGCAGACTGC AGCGCTATCCAGCTGGGCAAAGCATGCTATGAGCCGAACACCTTAGTTGCACATGCATCT TACGCATTCAATGATTACTACCAACGCAAGGGCCAGGCTAGCGGCACGTGCAACTTCAAT GGTGTCGCTTTCATCGTCTACAAGCCATCACCAAGCATCTGCGATCCGAACCCAAGTTGG TGCGTTGCGAAAGATAGTGTCGGGGAAGCACAACTACAGAATGCACTAGACTACGCGTGC GGTAGTTGTGCCGACTGCAGCGCCATACAGCGCGGTGCACAGTGCTTTAATCCGGACACC AAAGTGGCTCACGCAACCTATGCATTCAACGACTATTACCAGACAGCCGGTCGGGCCAGT GGCTCGTGTGACTTTGCCGGTGCCGCAACCATTGTCACACAACAACCAAAGATTGGAAAC TGCCTACTCCCACCAAACAACGCTTGATCAGAACAAACTGTCTAGGAAGACCAAAAGCTA GCCTAGCTAGCTACCAAAGGCAGTGAGGATGGGATTAAAGAATAATTCCATATTCTTCTA CAGAGAAAATAAGGATTAAACTTTTTGTATTTCCCGTTGGAAATTTTAAATAAATAAATG TACTGTTTGCTCCTGTTGAATGAAATTCCGCAGTTACTTGTTTCAG