Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0537600-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:21140941:21144246:1 gene:Os07g0537600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0537600-01)
Sequence

ATGCTCGCAGTTGTAGTCGTCGTCGTTGCCGTGCTGCTGCCGCTCGCCGCGGCGCAGCAG
ACCATGCAGTTCTCGTCATGCGCCAGCGGCGCCTACGCGGCGAACAGCACGTACGAGGCG
AACCTCGCCGTCCTCGCGGCGGCGCTCCCGGGCAACGCGTCCACCGCGGCGGCGGCCGGC
TACGCCACGGCCACCGTCGGCGCGGTGCCCGACCAGGTGTCCGCGCTGGCGCTGTGCCGC
GGCGACGCGAACGCCACGGCGTGCCGCGCGTGCGTCGCGGCGTCGTTCCGCGTCGCGCGG
CGGGACTGCCCCAGCAGCAAGGACGCCACCACCTACCAGGACGGCTGCATCGTCCGCTTC
TCCGACCAGCGGTTCCTCGACTTCGTCGGCGTGAACTCGCCGGTCAGCGAGCTCTACTCC
GACGCCGACAGCAACATCACGGCCGTCCCGGTGGCCTGGTTCAACGCCGCCGTCGTCGCG
CTGATGAACGCGACGGTGGACACGGCCGTGGCCGCCGGCAGCGGCAGCAACAACACCAAG
AAGTACTTCGCCACGGCGGTGGAGGACTTCGACCCGAAGCACTACCCGAAGATTTACGGG
ATGGCGCAGTGCGCGCCGGTGATGACGGCGGCGCAGTGCCGGAGCTGCCTCGGCGGCTTC
GTCTCGTCGATCCCATGGTTCTTGAACGGGAAGCCCGGAGGGAGAGTTCTTGGGATTTGG
TGCAACCTGAGGTACAGCGTGAAGCCGTTCTATCAGGGCCAGCCAATGCTGCAGATTTCT
GCGCCGCCGGAGCCACCGCCGCCGGCCATGCCTTCACTTGCTGCTCCGCCGACTAGAACA
GCGAGGAGAAGGAGAGTTGCAGGGATCTCTGCAGGCGTCGCTTGCTTCGTTGTCTTGATG
TTGATACTGTCAGCTTATGCTTTCATTCGTTTCAAGAGAAAGAAGGCTGCAAAGAAAGAC
AACTTATTGAAGAAAATGGCAAGAGGAAAATGCACGATCTTTGATTTGGCTACACTGAAA
GAGGCAACTGAGAACTTCTCAGAGAAGCATAAGCTTGGAGAAGGCGGATTTGGTACTGTA
TATAAGGGAAAATTACCAGACGGCCAAGAAATAGCAGTAAAGAAGCTCATAGAAAGTTGT
GGGCATGGACTGAATCAGCTACACAATGAAGTGCTGGTGTTGGCAGAGCTTCAGCACAAG
AACCTTGTTAGGCTACAGGGGTTTTGCGTCCATAAGGATGAGATGTTGCTTGTTTATGAA
TACATAAAAAATGGGAGCCTCGACAACTTTTTATTTGCACATGCTAGTAGAGGAAATGCA
CTAAGTTGGGACCAACAGTACAACATCATTTTTGGAATTGCCAAGGGAATAATGTACCTT
CACGAGGACTCAAGCATAAGGATCATCCACAGAGACCTTAAAGCTAACAATATTCTGCTT
GATGAGGATATGGATCCAAAAATTGCAGACTTTGGACTAGCAAGACTGATAGGAGGAGGT
CATACTCACACAAAGACAACTAGAATTGTTGGAACATACGGATATATGGCACCAGAGTAT
GCAATACATGGAAATGTGTCACCAAAGATTGACATTTTCAGCTTTGGCGTGCTGGTACTT
GAAATTGTAACCAAGAGAAAGAACTGCAGCTATGGCGATGGCACCACTGACACAGTGAAT
CTCCTAAGTGATGTATGGAGTTACTGGACCGAAGGTGTGATTTCACAGGTAATTGACCAA
TCACTTGAAGGGCACTTTCGAAACCAGGCGCTAAGATGCATCCACATTGGGCTGCTGTGT
GTCCAATCAGATCCTGACGACAGGCCGGACATTCCATCAGTCATTTTCATGCTGACCAGG
GATAACATGGAGCTTCAGCCACCAACAGAGCCTGCATTCTTCTTCAACGGAAACTCGAAC
TCAGCTTCTCAAACATCTGACCAGCGCGTCTATGTGTACGATCGGTCTGGTAAGATCTAT
GAAGAGGATATCTCTGCGAATGGGATCACACTTACTGACATATATCCTAGATAA

Peptide Sequence

PEP ID

Os07t0537600-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:21140941:21144246:1 gene:Os07g0537600 transcript:Os07t0537600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0537600-01)
Sequence

MLAVVVVVVAVLLPLAAAQQTMQFSSCASGAYAANSTYEANLAVLAAALPGNASTAAAAG
YATATVGAVPDQVSALALCRGDANATACRACVAASFRVARRDCPSSKDATTYQDGCIVRF
SDQRFLDFVGVNSPVSELYSDADSNITAVPVAWFNAAVVALMNATVDTAVAAGSGSNNTK
KYFATAVEDFDPKHYPKIYGMAQCAPVMTAAQCRSCLGGFVSSIPWFLNGKPGGRVLGIW
CNLRYSVKPFYQGQPMLQISAPPEPPPPAMPSLAAPPTRTARRRRVAGISAGVACFVVLM
LILSAYAFIRFKRKKAAKKDNLLKKMARGKCTIFDLATLKEATENFSEKHKLGEGGFGTV
YKGKLPDGQEIAVKKLIESCGHGLNQLHNEVLVLAELQHKNLVRLQGFCVHKDEMLLVYE
YIKNGSLDNFLFAHASRGNALSWDQQYNIIFGIAKGIMYLHEDSSIRIIHRDLKANNILL
DEDMDPKIADFGLARLIGGGHTHTKTTRIVGTYGYMAPEYAIHGNVSPKIDIFSFGVLVL
EIVTKRKNCSYGDGTTDTVNLLSDVWSYWTEGVISQVIDQSLEGHFRNQALRCIHIGLLC
VQSDPDDRPDIPSVIFMLTRDNMELQPPTEPAFFFNGNSNSASQTSDQRVYVYDRSGKIY
EEDISANGITLTDIYPR

Transcript Sequence

Transcript ID

Os07t0537600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:21140941:21144246:1 gene:Os07g0537600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os07t0537600-01)
Sequence

AGGCTCAGAGTTGCCGCGCAAGGTTCGTCCGTCAAAGAAGGGAAAGAGGAATTGTACGTT
GCATTCTGCCGGCCGCGGCAATGCTCGCAGTTGTAGTCGTCGTCGTTGCCGTGCTGCTGC
CGCTCGCCGCGGCGCAGCAGACCATGCAGTTCTCGTCATGCGCCAGCGGCGCCTACGCGG
CGAACAGCACGTACGAGGCGAACCTCGCCGTCCTCGCGGCGGCGCTCCCGGGCAACGCGT
CCACCGCGGCGGCGGCCGGCTACGCCACGGCCACCGTCGGCGCGGTGCCCGACCAGGTGT
CCGCGCTGGCGCTGTGCCGCGGCGACGCGAACGCCACGGCGTGCCGCGCGTGCGTCGCGG
CGTCGTTCCGCGTCGCGCGGCGGGACTGCCCCAGCAGCAAGGACGCCACCACCTACCAGG
ACGGCTGCATCGTCCGCTTCTCCGACCAGCGGTTCCTCGACTTCGTCGGCGTGAACTCGC
CGGTCAGCGAGCTCTACTCCGACGCCGACAGCAACATCACGGCCGTCCCGGTGGCCTGGT
TCAACGCCGCCGTCGTCGCGCTGATGAACGCGACGGTGGACACGGCCGTGGCCGCCGGCA
GCGGCAGCAACAACACCAAGAAGTACTTCGCCACGGCGGTGGAGGACTTCGACCCGAAGC
ACTACCCGAAGATTTACGGGATGGCGCAGTGCGCGCCGGTGATGACGGCGGCGCAGTGCC
GGAGCTGCCTCGGCGGCTTCGTCTCGTCGATCCCATGGTTCTTGAACGGGAAGCCCGGAG
GGAGAGTTCTTGGGATTTGGTGCAACCTGAGGTACAGCGTGAAGCCGTTCTATCAGGGCC
AGCCAATGCTGCAGATTTCTGCGCCGCCGGAGCCACCGCCGCCGGCCATGCCTTCACTTG
CTGCTCCGCCGACTAGAACAGCGAGGAGAAGGAGAGTTGCAGGGATCTCTGCAGGCGTCG
CTTGCTTCGTTGTCTTGATGTTGATACTGTCAGCTTATGCTTTCATTCGTTTCAAGAGAA
AGAAGGCTGCAAAGAAAGACAACTTATTGAAGAAAATGGCAAGAGGAAAATGCACGATCT
TTGATTTGGCTACACTGAAAGAGGCAACTGAGAACTTCTCAGAGAAGCATAAGCTTGGAG
AAGGCGGATTTGGTACTGTATATAAGGGAAAATTACCAGACGGCCAAGAAATAGCAGTAA
AGAAGCTCATAGAAAGTTGTGGGCATGGACTGAATCAGCTACACAATGAAGTGCTGGTGT
TGGCAGAGCTTCAGCACAAGAACCTTGTTAGGCTACAGGGGTTTTGCGTCCATAAGGATG
AGATGTTGCTTGTTTATGAATACATAAAAAATGGGAGCCTCGACAACTTTTTATTTGCAC
ATGCTAGTAGAGGAAATGCACTAAGTTGGGACCAACAGTACAACATCATTTTTGGAATTG
CCAAGGGAATAATGTACCTTCACGAGGACTCAAGCATAAGGATCATCCACAGAGACCTTA
AAGCTAACAATATTCTGCTTGATGAGGATATGGATCCAAAAATTGCAGACTTTGGACTAG
CAAGACTGATAGGAGGAGGTCATACTCACACAAAGACAACTAGAATTGTTGGAACATACG
GATATATGGCACCAGAGTATGCAATACATGGAAATGTGTCACCAAAGATTGACATTTTCA
GCTTTGGCGTGCTGGTACTTGAAATTGTAACCAAGAGAAAGAACTGCAGCTATGGCGATG
GCACCACTGACACAGTGAATCTCCTAAGTGATGTATGGAGTTACTGGACCGAAGGTGTGA
TTTCACAGGTAATTGACCAATCACTTGAAGGGCACTTTCGAAACCAGGCGCTAAGATGCA
TCCACATTGGGCTGCTGTGTGTCCAATCAGATCCTGACGACAGGCCGGACATTCCATCAG
TCATTTTCATGCTGACCAGGGATAACATGGAGCTTCAGCCACCAACAGAGCCTGCATTCT
TCTTCAACGGAAACTCGAACTCAGCTTCTCAAACATCTGACCAGCGCGTCTATGTGTACG
ATCGGTCTGGTAAGATCTATGAAGAGGATATCTCTGCGAATGGGATCACACTTACTGACA
TATATCCTAGATAACCCTTTTAGTTTTTAGTTTTTCATAGATAAGTGAAATGTGTATGCA
TCTAAAGTGATCAAAGGCGAACTTCGCTAGTGTTTGGTCCTTGAATTCGAAGTCAGATGC
AGATATTCTGCCTATTGAGGTAACATTGTAATTTTATATGG