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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0529700-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:20729434:20730256:1 gene:Os07g0529700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 1 description:Similar to Xyloglucan endotransglucosylase/hydrolase 1. (Os07t0529700-01);Similar to Xyloglucan endo-transglycosylase-like protein. (Os07t0529700-02)
Sequence

ATGGGGTCGCTGGGGCGGCGGCCGTGGGTTGGTGGGTTGACGGCGGCGATGATTTTTGCT
GTTGCTGTGTGCGGTTTCTGCTTCAGTGGGGCGTCGGCGGCGGCGGCAGCGCCGACGTTC
GGCGACAACTTCGAGATCACCGGAGCCGAGGATCACGTCAAGACCTCCGCCGACGGCCAG
ACGTGGTACCTCTACCTCGACAACAAGACTGGCGTCGGGTTCCAGACGAAGGAGAGGTAT
CTCTTCGGGTGGTTCAGCATGAACCTCAAGCTCGCCGGCAACGACTCCGCCGGCGTCGTC
ACCGCCTACTACATGTGCTCCGACGTGGACGCGGCGCCGCAGCGCGACGAGCTGGACTTC
GAGTTCCTGGGGAACCGGACGGGTGAGCCCTACATCATCCAGACCAACGTGTACCGCAGC
GGCGTCGGCGGCCGGGAGATGCGCCACTCGCTGTGGTTCGACCCCACCGCCGACTTCCAC
TCCTACTCCATCCTCTGGAACCCCAAGCAGATCGTGTAA

Peptide Sequence

PEP ID

Os07t0529700-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:20729434:20730256:1 gene:Os07g0529700 transcript:Os07t0529700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 1 description:Similar to Xyloglucan endotransglucosylase/hydrolase 1. (Os07t0529700-01);Similar to Xyloglucan endo-transglycosylase-like protein. (Os07t0529700-02)
Sequence

MGSLGRRPWVGGLTAAMIFAVAVCGFCFSGASAAAAAPTFGDNFEITGAEDHVKTSADGQ
TWYLYLDNKTGVGFQTKERYLFGWFSMNLKLAGNDSAGVVTAYYMCSDVDAAPQRDELDF
EFLGNRTGEPYIIQTNVYRSGVGGREMRHSLWFDPTADFHSYSILWNPKQIV

Transcript Sequence

Transcript ID

Os07t0529700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:20729434:20730256:1 gene:Os07g0529700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 1 description:Similar to Xyloglucan endotransglucosylase/hydrolase 1. (Os07t0529700-01);Similar to Xyloglucan endo-transglycosylase-like protein. (Os07t0529700-02)
Sequence

GTGCTGCTCTCACTATCGATCGACCTCTGCTGCTGCCTCGCTGTCCTCTGCTACGTGAGC
TCGGCCGGCTCGGGTGTCGAGGACGATCGAGGATGGGGTCGCTGGGGCGGCGGCCGTGGG
TTGGTGGGTTGACGGCGGCGATGATTTTTGCTGTTGCTGTGTGCGGTTTCTGCTTCAGTG
GGGCGTCGGCGGCGGCGGCAGCGCCGACGTTCGGCGACAACTTCGAGATCACCGGAGCCG
AGGATCACGTCAAGACCTCCGCCGACGGCCAGACGTGGTACCTCTACCTCGACAACAAGA
CTGGCGTCGGGTTCCAGACGAAGGAGAGGTATCTCTTCGGGTGGTTCAGCATGAACCTCA
AGCTCGCCGGCAACGACTCCGCCGGCGTCGTCACCGCCTACTACATGTGCTCCGACGTGG
ACGCGGCGCCGCAGCGCGACGAGCTGGACTTCGAGTTCCTGGGGAACCGGACGGGTGAGC
CCTACATCATCCAGACCAACGTGTACCGCAGCGGCGTCGGCGGCCGGGAGATGCGCCACT
CGCTGTGGTTCGACCCCACCGCCGACTTCCACTCCTACTCCATCCTCTGGAACCCCAAGC
AGATCGTGTAAGTGATCAACCGAACAATAGTAATCAAGCTTCTAGTTGTTTCAA