Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0525500-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:20420138:20421500:-1 gene:Os07g0525500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYKETIDE SYNTHASE 13 description:Similar to chalcone synthase 8. (Os07t0525500-00)
Sequence	ATGTCACCGTCCACGACATCCGTCGTGCGCAGCGTGCAGACACCACCGCCGCCGTGCTGG CCATCGGCACCGCGAACCCGGTCACCTGCATCTCCCAAGCCGACTACCCCGACTACTACT TCCGTATCACCAACACAGAGCACCTCACTGACCTCAAACGCAAACTCAACAACCTATGCA TCAGGCGCCGACAAGCGTTTCTTCCACCACAACGAGGAGATGATTGCCGCGCACCCGGAG TTCCTCGACCGCGCCACGCCGTCGCTGGACGCCCGGCTGGACATCGCCGCCGCCGCGGGG CCGGAGCTCGCGGCGCAGGCGGCGGAGAGGGCCATCGTCCGGTGGGGCCGCCCCGCGGCC GACATCACCCACCTCGTCGTGGCCACCAACGCGGGCGCGCAGGCCCCGGGCGCGGACCAC CGCCTCGCCTCGCTCCTCGGCCTCCGCCCCACCGTGCGCCGCACCATGCTCCACCTCAGC GGCTGCTCCGCGGGCGCCGCCGCGCTGCGCCTCGCCAAGGACCTCGCCGAGAACAGCCGC GGCGCGCGCGTCCTCGTCGCCTGCGTCGAGCTCAACGTCGTCGCGTTCCATGGCCTCAAG GAGGACTACCCCCAGACGCTCACCTGCCAGGGACTGTTCGGCGACGGCGCCGGCGCGGTC ATCGTCGGCGCCGATGCCGTGCGCCCCGTCGAGCGCCCGCTCTTCGAGATGGTCGCCGTG TCGCAGGCCGTGATCCCGGGAACGGAGCACGCCCTCAACATGCGGCTCACGGAGCACGGC CTCGACGGCCACGTCTCCATCAAGGACCTCATACCTCTAGCGGCGGCCAACGCCGACGAG CTCCTGTCCGACGCGTTCCGGCAGCTCGGCCTCGCCGGCGTCGAATGGAACGATCTCTTC TGGGTGGTGCACCCTGGAGCCCCGTCGATCTTGGACCAAATCGAGAGCGCTCTCCGGCTG GAGCCCGGGAAGCTGGCGGCGAGCCGGAAGGTGCTAAGGGAGTACGGCAACATGCTGGGC AGCACGCTGATCTTCGTGCTCGACGAGCAGCGGCGGCGGATGGAGGAGGAAGAAGGCGGT CGATCAGCTGAGTGGGGGGTGATGATGGGGTTTGGACCTGGTTTCACCATTGAGACCATG GTGTTGCACTTGCCTGAATGCCCTAAAGAACAGTAA

Peptide Sequence

PEP ID	Os07t0525500-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:20420138:20421500:-1 gene:Os07g0525500 transcript:Os07t0525500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYKETIDE SYNTHASE 13 description:Similar to chalcone synthase 8. (Os07t0525500-00)
Sequence	MSPSTTSVVRSVQTPPPPCWPSAPRTRSPASPKPTTPTTTSVSPTQSTSLTSNANSTTYA SGADKRFFHHNEEMIAAHPEFLDRATPSLDARLDIAAAAGPELAAQAAERAIVRWGRPAA DITHLVVATNAGAQAPGADHRLASLLGLRPTVRRTMLHLSGCSAGAAALRLAKDLAENSR GARVLVACVELNVVAFHGLKEDYPQTLTCQGLFGDGAGAVIVGADAVRPVERPLFEMVAV SQAVIPGTEHALNMRLTEHGLDGHVSIKDLIPLAAANADELLSDAFRQLGLAGVEWNDLF WVVHPGAPSILDQIESALRLEPGKLAASRKVLREYGNMLGSTLIFVLDEQRRRMEEEEGG RSAEWGVMMGFGPGFTIETMVLHLPECPKEQ

Transcript Sequence

Transcript ID	Os07t0525500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:20420138:20421500:-1 gene:Os07g0525500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYKETIDE SYNTHASE 13 description:Similar to chalcone synthase 8. (Os07t0525500-00)
Sequence	ATGTCACCGTCCACGACATCCGTCGTGCGCAGCGTGCAGACACCACCGCCGCCGTGCTGG CCATCGGCACCGCGAACCCGGTCACCTGCATCTCCCAAGCCGACTACCCCGACTACTACT TCCGTATCACCAACACAGAGCACCTCACTGACCTCAAACGCAAACTCAACAACCTATGCA TCAGGCGCCGACAAGCGTTTCTTCCACCACAACGAGGAGATGATTGCCGCGCACCCGGAG TTCCTCGACCGCGCCACGCCGTCGCTGGACGCCCGGCTGGACATCGCCGCCGCCGCGGGG CCGGAGCTCGCGGCGCAGGCGGCGGAGAGGGCCATCGTCCGGTGGGGCCGCCCCGCGGCC GACATCACCCACCTCGTCGTGGCCACCAACGCGGGCGCGCAGGCCCCGGGCGCGGACCAC CGCCTCGCCTCGCTCCTCGGCCTCCGCCCCACCGTGCGCCGCACCATGCTCCACCTCAGC GGCTGCTCCGCGGGCGCCGCCGCGCTGCGCCTCGCCAAGGACCTCGCCGAGAACAGCCGC GGCGCGCGCGTCCTCGTCGCCTGCGTCGAGCTCAACGTCGTCGCGTTCCATGGCCTCAAG GAGGACTACCCCCAGACGCTCACCTGCCAGGGACTGTTCGGCGACGGCGCCGGCGCGGTC ATCGTCGGCGCCGATGCCGTGCGCCCCGTCGAGCGCCCGCTCTTCGAGATGGTCGCCGTG TCGCAGGCCGTGATCCCGGGAACGGAGCACGCCCTCAACATGCGGCTCACGGAGCACGGC CTCGACGGCCACGTCTCCATCAAGGACCTCATACCTCTAGCGGCGGCCAACGCCGACGAG CTCCTGTCCGACGCGTTCCGGCAGCTCGGCCTCGCCGGCGTCGAATGGAACGATCTCTTC TGGGTGGTGCACCCTGGAGCCCCGTCGATCTTGGACCAAATCGAGAGCGCTCTCCGGCTG GAGCCCGGGAAGCTGGCGGCGAGCCGGAAGGTGCTAAGGGAGTACGGCAACATGCTGGGC AGCACGCTGATCTTCGTGCTCGACGAGCAGCGGCGGCGGATGGAGGAGGAAGAAGGCGGT CGATCAGCTGAGTGGGGGGTGATGATGGGGTTTGGACCTGGTTTCACCATTGAGACCATG GTGTTGCACTTGCCTGAATGCCCTAAAGAACAGTAA